RNA–Protein interactions for RNA: ENST00000564890.1

PKD1-229, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 574 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-229ENST00000564890 PTGES2Q9H7Z7 377 aa16.9■□□□□ 0.3
PKD1-229ENST00000564890 EXD2Q9NVH0 621 aa16.9■□□□□ 0.3
PKD1-229ENST00000564890 RPH3AQ9Y2J0 694 aaPredicted RBP16.9■□□□□ 0.3
PKD1-229ENST00000564890 MRPS18CQ9Y3D5 142 aaKnown RBP16.9■□□□□ 0.3
PKD1-229ENST00000564890 FLNBO75369 2602 aaKnown RBP16.89■□□□□ 0.29
PKD1-229ENST00000564890 PCNX1Q96RV3 2341 aa16.89■□□□□ 0.29
PKD1-229ENST00000564890 IGLV3-32A0A0A0MS00 114 aa16.89■□□□□ 0.29
PKD1-229ENST00000564890 A0A0G2JND7 137 aa16.89■□□□□ 0.29
PKD1-229ENST00000564890 A0A1W2PQD3 144 aa16.89■□□□□ 0.29
PKD1-229ENST00000564890 GMFGO60234 142 aa16.89■□□□□ 0.29
PKD1-229ENST00000564890 ZIC3O60481 467 aa16.89■□□□□ 0.29
PKD1-229ENST00000564890 WDR1O75083 606 aa16.89■□□□□ 0.29
PKD1-229ENST00000564890 ANP32DO95626 131 aa16.89■□□□□ 0.29
PKD1-229ENST00000564890 AGR2O95994 175 aa16.89■□□□□ 0.29
PKD1-229ENST00000564890 DCTP40126 519 aa16.89■□□□□ 0.29
PKD1-229ENST00000564890 SQLEQ14534 574 aa16.89■□□□□ 0.29
PKD1-229ENST00000564890 GANABQ14697 944 aaKnown RBP16.89■□□□□ 0.29
PKD1-229ENST00000564890 ARHGAP11BQ3KRB8 267 aa16.89■□□□□ 0.29
PKD1-229ENST00000564890 DCST1Q5T197 706 aa16.89■□□□□ 0.29
PKD1-229ENST00000564890 C1orf185Q5T7R7 199 aa16.89■□□□□ 0.29
PKD1-229ENST00000564890 MAMDC2Q7Z304 686 aaPredicted RBP16.89■□□□□ 0.29
PKD1-229ENST00000564890 RNF130Q86XS8 419 aa16.89■□□□□ 0.29
PKD1-229ENST00000564890 ULK2Q8IYT8 1036 aa16.89■□□□□ 0.29
PKD1-229ENST00000564890 ZNF527Q8NB42 609 aa16.89■□□□□ 0.29
PKD1-229ENST00000564890 XAGE5Q8WWM1 108 aa16.89■□□□□ 0.29
PKD1-229ENST00000564890 HHATLQ9HCP6 504 aa16.89■□□□□ 0.29
PKD1-229ENST00000564890 ASH1LQ9NR48 2969 aaKnown RBP16.89■□□□□ 0.29
PKD1-229ENST00000564890 SLC6A13Q9NSD5 602 aa16.89■□□□□ 0.29
PKD1-229ENST00000564890 FGFR1OP2Q9NVK5 253 aa16.89■□□□□ 0.29
PKD1-229ENST00000564890 PLEKHB1Q9UF11 243 aaPredicted RBP16.89■□□□□ 0.29
PKD1-229ENST00000564890 NR5A2O00482 541 aa16.88■□□□□ 0.29
PKD1-229ENST00000564890 ACTL6AO96019 429 aa16.88■□□□□ 0.29
PKD1-229ENST00000564890 VIMP08670 466 aaKnown RBP16.88■□□□□ 0.29
PKD1-229ENST00000564890 GABRA1P14867 456 aa16.88■□□□□ 0.29
PKD1-229ENST00000564890 HK1P19367 917 aa16.88■□□□□ 0.29
PKD1-229ENST00000564890 NCF2P19878 526 aaPredicted RBP16.88■□□□□ 0.29
PKD1-229ENST00000564890 ATP12AP54707 1039 aa16.88■□□□□ 0.29
PKD1-229ENST00000564890 GFRA1P56159 465 aa16.88■□□□□ 0.29
PKD1-229ENST00000564890 IRX1P78414 480 aaPredicted RBP16.88■□□□□ 0.29
PKD1-229ENST00000564890 RCAN2Q14206 197 aa16.88■□□□□ 0.29
PKD1-229ENST00000564890 CD226Q15762 336 aa16.88■□□□□ 0.29
PKD1-229ENST00000564890 KLHL26Q53HC5 615 aa16.88■□□□□ 0.29
PKD1-229ENST00000564890 C6orf10Q5SRN2 563 aa16.88■□□□□ 0.29
PKD1-229ENST00000564890 RTL6Q6ICC9 239 aa16.88■□□□□ 0.29
PKD1-229ENST00000564890 HEPHL1Q6MZM0 1159 aa16.88■□□□□ 0.29
PKD1-229ENST00000564890 B3GNT6Q6ZMB0 384 aa16.88■□□□□ 0.29
PKD1-229ENST00000564890 OLIG3Q7RTU3 272 aa16.88■□□□□ 0.29
PKD1-229ENST00000564890 FUNDC1Q8IVP5 155 aa16.88■□□□□ 0.29
PKD1-229ENST00000564890 MISPQ8IVT2 679 aa16.88■□□□□ 0.29
PKD1-229ENST00000564890 PM20D2Q8IYS1 436 aa16.88■□□□□ 0.29
PKD1-229ENST00000564890 PNPT1Q8TCS8 783 aaKnown RBP16.88■□□□□ 0.29
PKD1-229ENST00000564890 C1GALT1C1Q96EU7 318 aa16.88■□□□□ 0.29
PKD1-229ENST00000564890 SFXN2Q96NB2 322 aa16.88■□□□□ 0.29
PKD1-229ENST00000564890 PRDM14Q9GZV8 571 aa16.88■□□□□ 0.29
PKD1-229ENST00000564890 CCDC167Q9P0B6 97 aa16.88■□□□□ 0.29
PKD1-229ENST00000564890 CAMK2AQ9UQM7 478 aa16.88■□□□□ 0.29
PKD1-229ENST00000564890 FAM215AQ9Y5M1 114 aa16.88■□□□□ 0.29
PKD1-229ENST00000564890 MED12Q93074 2177 aa16.88■□□□□ 0.29
PKD1-229ENST00000564890 NCOA6Q14686 2063 aaPredicted RBP16.87■□□□□ 0.29
PKD1-229ENST00000564890 NPIPB9F8W1W9 429 aa16.87■□□□□ 0.29
PKD1-229ENST00000564890 STX11O75558 287 aa16.87■□□□□ 0.29
PKD1-229ENST00000564890 KRT75O95678 551 aa16.87■□□□□ 0.29
PKD1-229ENST00000564890 HOXD4P09016 255 aaPredicted RBP16.87■□□□□ 0.29
PKD1-229ENST00000564890 ZCCHC18P0CG32 403 aa16.87■□□□□ 0.29
PKD1-229ENST00000564890 TROVE2P10155 538 aaKnown RBP eCLIP16.87■□□□□ 0.29
PKD1-229ENST00000564890 RNF144AP50876 292 aaPredicted RBP16.87■□□□□ 0.29
PKD1-229ENST00000564890 ANXA11P50995 505 aaKnown RBP16.87■□□□□ 0.29
PKD1-229ENST00000564890 NUP107P57740 925 aa16.87■□□□□ 0.29
PKD1-229ENST00000564890 PMPCAQ10713 525 aa16.87■□□□□ 0.29
PKD1-229ENST00000564890 GPR68Q15743 365 aa16.87■□□□□ 0.29
PKD1-229ENST00000564890 GTDC1Q4AE62 458 aa16.87■□□□□ 0.29
PKD1-229ENST00000564890 AGKQ53H12 422 aa16.87■□□□□ 0.29
PKD1-229ENST00000564890 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.87■□□□□ 0.29
PKD1-229ENST00000564890 AAGABQ6PD74 315 aa16.87■□□□□ 0.29
PKD1-229ENST00000564890 XKRXQ6PP77 449 aa16.87■□□□□ 0.29
PKD1-229ENST00000564890 SLC2A7Q6PXP3 512 aa16.87■□□□□ 0.29
PKD1-229ENST00000564890 BLOC1S3Q6QNY0 202 aa16.87■□□□□ 0.29
PKD1-229ENST00000564890 ENPP6Q6UWR7 440 aa16.87■□□□□ 0.29
PKD1-229ENST00000564890 ZNF614Q8N883 585 aa16.87■□□□□ 0.29
PKD1-229ENST00000564890 PHOSPHO1Q8TCT1 267 aa16.87■□□□□ 0.29
PKD1-229ENST00000564890 ZFP90Q8TF47 636 aa16.87■□□□□ 0.29
PKD1-229ENST00000564890 RND1Q92730 232 aa16.87■□□□□ 0.29
PKD1-229ENST00000564890 GTF2H4Q92759 462 aa16.87■□□□□ 0.29
PKD1-229ENST00000564890 SPDL1Q96EA4 605 aa16.87■□□□□ 0.29
PKD1-229ENST00000564890 WDYHV1Q96HA8 205 aa16.87■□□□□ 0.29
PKD1-229ENST00000564890 SH3YL1Q96HL8 342 aaPredicted RBP16.87■□□□□ 0.29
PKD1-229ENST00000564890 TTYH2Q9BSA4 534 aa16.87■□□□□ 0.29
PKD1-229ENST00000564890 TMEM120AQ9BXJ8 343 aa16.87■□□□□ 0.29
PKD1-229ENST00000564890 ZNF350Q9GZX5 532 aa16.87■□□□□ 0.29
PKD1-229ENST00000564890 CCDC134Q9H6E4 229 aa16.87■□□□□ 0.29
PKD1-229ENST00000564890 TRIM33Q9UPN9 1127 aa16.87■□□□□ 0.29
PKD1-229ENST00000564890 AHRRA9YTQ3 701 aa16.86■□□□□ 0.29
PKD1-229ENST00000564890 H3BNH8 94 aa16.86■□□□□ 0.29
PKD1-229ENST00000564890 HMGN4O00479 90 aa16.86■□□□□ 0.29
PKD1-229ENST00000564890 FCMRO60667 390 aa16.86■□□□□ 0.29
PKD1-229ENST00000564890 GP1BBP13224 206 aa16.86■□□□□ 0.29
PKD1-229ENST00000564890 AGAP20933 346 aa16.86■□□□□ 0.29
PKD1-229ENST00000564890 CHMP24386 653 aa16.86■□□□□ 0.29
PKD1-229ENST00000564890 MSX1P28360 303 aa16.86■□□□□ 0.29
PKD1-229ENST00000564890 PTGER4P35408 488 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms