RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 CD1EP15812 388 aa14.56□□□□□ -0.08
RAB40C-208ENST00000564703 DPP4P27487 766 aa14.56□□□□□ -0.08
RAB40C-208ENST00000564703 DSCR4P56555 118 aaPredicted RBP14.56□□□□□ -0.08
RAB40C-208ENST00000564703 HSF1Q00613 529 aa14.56□□□□□ -0.08
RAB40C-208ENST00000564703 SYPL1Q16563 259 aa14.56□□□□□ -0.08
RAB40C-208ENST00000564703 KLHL26Q53HC5 615 aa14.56□□□□□ -0.08
RAB40C-208ENST00000564703 APOOLQ6UXV4 268 aa14.56□□□□□ -0.08
RAB40C-208ENST00000564703 LRRC74BQ6ZQY2 392 aa14.56□□□□□ -0.08
RAB40C-208ENST00000564703 TRILQ7L0X0 811 aa14.56□□□□□ -0.08
RAB40C-208ENST00000564703 SNX32Q86XE0 403 aa14.56□□□□□ -0.08
RAB40C-208ENST00000564703 GATSQ8NAP1 163 aa14.56□□□□□ -0.08
RAB40C-208ENST00000564703 RP9Q8TA86 221 aaKnown RBP14.56□□□□□ -0.08
RAB40C-208ENST00000564703 NEIL3Q8TAT5 605 aa14.56□□□□□ -0.08
RAB40C-208ENST00000564703 SH3GL1Q99961 368 aa14.56□□□□□ -0.08
RAB40C-208ENST00000564703 ZNF350Q9GZX5 532 aa14.56□□□□□ -0.08
RAB40C-208ENST00000564703 UBQLN3Q9H347 655 aa14.56□□□□□ -0.08
RAB40C-208ENST00000564703 PLSCR2Q9NRY7 297 aa14.56□□□□□ -0.08
RAB40C-208ENST00000564703 SLC25A37Q9NYZ2 338 aa14.56□□□□□ -0.08
RAB40C-208ENST00000564703 ARMCX1Q9P291 453 aa14.56□□□□□ -0.08
RAB40C-208ENST00000564703 ADAM21Q9UKJ8 722 aa14.56□□□□□ -0.08
RAB40C-208ENST00000564703 ARL2BPQ9Y2Y0 163 aa14.56□□□□□ -0.08
RAB40C-208ENST00000564703 MRPS18CQ9Y3D5 142 aaKnown RBP14.56□□□□□ -0.08
RAB40C-208ENST00000564703 C15orf38-AP3S2A0A0A6YYH1 394 aa14.55□□□□□ -0.08
RAB40C-208ENST00000564703 NPIPA5A0A0B4J1W7 369 aa14.55□□□□□ -0.08
RAB40C-208ENST00000564703 A0A1B0GUH1 482 aa14.55□□□□□ -0.08
RAB40C-208ENST00000564703 A0A1B0GVC2 190 aa14.55□□□□□ -0.08
RAB40C-208ENST00000564703 OR14I1A6ND48 311 aa14.55□□□□□ -0.08
RAB40C-208ENST00000564703 C5orf58C9J3I9 102 aa14.55□□□□□ -0.08
RAB40C-208ENST00000564703 FAM47E-STBD1D6RA91 191 aa14.55□□□□□ -0.08
RAB40C-208ENST00000564703 NPIPA2E9PIF3 369 aa14.55□□□□□ -0.08
RAB40C-208ENST00000564703 NPIPA7E9PJI5 369 aa14.55□□□□□ -0.08
RAB40C-208ENST00000564703 NPIPA3F8WFD2 350 aa14.55□□□□□ -0.08
RAB40C-208ENST00000564703 AQP7O14520 342 aa14.55□□□□□ -0.08
RAB40C-208ENST00000564703 MRASO14807 208 aa14.55□□□□□ -0.08
RAB40C-208ENST00000564703 BCKDKO14874 412 aa14.55□□□□□ -0.08
RAB40C-208ENST00000564703 H6PDO95479 791 aa14.55□□□□□ -0.08
RAB40C-208ENST00000564703 C1QCP02747 245 aa14.55□□□□□ -0.08
RAB40C-208ENST00000564703 TPOP07202 933 aa14.55□□□□□ -0.08
RAB40C-208ENST00000564703 NPIPA8P0DM63 369 aa14.55□□□□□ -0.08
RAB40C-208ENST00000564703 SRD5A2P31213 254 aa14.55□□□□□ -0.08
RAB40C-208ENST00000564703 CRISP3P54108 245 aa14.55□□□□□ -0.08
RAB40C-208ENST00000564703 ZNF630Q2M218 657 aaPredicted RBP14.55□□□□□ -0.08
RAB40C-208ENST00000564703 RUNDC3AQ59EK9 446 aa14.55□□□□□ -0.08
RAB40C-208ENST00000564703 COQ5Q5HYK3 327 aa14.55□□□□□ -0.08
RAB40C-208ENST00000564703 WIPI1Q5MNZ9 446 aaPredicted RBP14.55□□□□□ -0.08
RAB40C-208ENST00000564703 WLSQ5T9L3 541 aa14.55□□□□□ -0.08
RAB40C-208ENST00000564703 DLEU7Q6UYE1 221 aa14.55□□□□□ -0.08
RAB40C-208ENST00000564703 PIGWQ7Z7B1 504 aa14.55□□□□□ -0.08
RAB40C-208ENST00000564703 YRDCQ86U90 279 aaKnown RBP14.55□□□□□ -0.08
RAB40C-208ENST00000564703 EID3Q8N140 333 aa14.55□□□□□ -0.08
RAB40C-208ENST00000564703 ZNF619Q8N2I2 560 aa14.55□□□□□ -0.08
RAB40C-208ENST00000564703 ANKFN1Q8N957 763 aa14.55□□□□□ -0.08
RAB40C-208ENST00000564703 FAM83FQ8NEG4 500 aaPredicted RBP14.55□□□□□ -0.08
RAB40C-208ENST00000564703 OIT3Q8WWZ8 545 aa14.55□□□□□ -0.08
RAB40C-208ENST00000564703 CCT8L2Q96SF2 557 aa14.55□□□□□ -0.08
RAB40C-208ENST00000564703 CGREF1Q99674 301 aa14.55□□□□□ -0.08
RAB40C-208ENST00000564703 RTN4RQ9BZR6 473 aa14.55□□□□□ -0.08
RAB40C-208ENST00000564703 SAP130Q9H0E3 1048 aa14.55□□□□□ -0.08
RAB40C-208ENST00000564703 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.55□□□□□ -0.08
RAB40C-208ENST00000564703 TAS2R10Q9NYW0 307 aa14.55□□□□□ -0.08
RAB40C-208ENST00000564703 FBXL2Q9UKC9 423 aa14.55□□□□□ -0.08
RAB40C-208ENST00000564703 ZNF407Q9C0G0 2248 aa14.55□□□□□ -0.08
RAB40C-208ENST00000564703 HCRTR2O43614 444 aa14.54□□□□□ -0.08
RAB40C-208ENST00000564703 GMFGO60234 142 aa14.54□□□□□ -0.08
RAB40C-208ENST00000564703 NUDT14O95848 222 aa14.54□□□□□ -0.08
RAB40C-208ENST00000564703 STSP08842 583 aa14.54□□□□□ -0.08
RAB40C-208ENST00000564703 ESRRAP11474 423 aaPredicted RBP14.54□□□□□ -0.08
RAB40C-208ENST00000564703 GPX2P18283 190 aa14.54□□□□□ -0.08
RAB40C-208ENST00000564703 HK1P19367 917 aa14.54□□□□□ -0.08
RAB40C-208ENST00000564703 MVDP53602 400 aa14.54□□□□□ -0.08
RAB40C-208ENST00000564703 CHRNEQ04844 493 aa14.54□□□□□ -0.08
RAB40C-208ENST00000564703 GANABQ14697 944 aaKnown RBP14.54□□□□□ -0.08
RAB40C-208ENST00000564703 ZNF141Q15928 474 aa14.54□□□□□ -0.08
RAB40C-208ENST00000564703 EIPR1Q53HC9 387 aa14.54□□□□□ -0.08
RAB40C-208ENST00000564703 PDZK1Q5T2W1 519 aa14.54□□□□□ -0.08
RAB40C-208ENST00000564703 GKAP1Q5VSY0 366 aaPredicted RBP14.54□□□□□ -0.08
RAB40C-208ENST00000564703 AP1ARQ63HQ0 302 aa14.54□□□□□ -0.08
RAB40C-208ENST00000564703 TYW3Q6IPR3 259 aaKnown RBP14.54□□□□□ -0.08
RAB40C-208ENST00000564703 RETREG3Q86VR2 466 aa14.54□□□□□ -0.08
RAB40C-208ENST00000564703 PEX5LQ8IYB4 626 aa14.54□□□□□ -0.08
RAB40C-208ENST00000564703 METTL25Q8N6Q8 603 aa14.54□□□□□ -0.08
RAB40C-208ENST00000564703 OR2M3Q8NG83 312 aa14.54□□□□□ -0.08
RAB40C-208ENST00000564703 B4GALNT2Q8NHY0 566 aa14.54□□□□□ -0.08
RAB40C-208ENST00000564703 FAM57AQ8TBR7 257 aa14.54□□□□□ -0.08
RAB40C-208ENST00000564703 CMTM5Q96DZ9 223 aa14.54□□□□□ -0.08
RAB40C-208ENST00000564703 ANKRD27Q96NW4 1050 aa14.54□□□□□ -0.08
RAB40C-208ENST00000564703 SLC6A15Q9H2J7 730 aa14.54□□□□□ -0.08
RAB40C-208ENST00000564703 ALKBH4Q9NXW9 302 aa14.54□□□□□ -0.08
RAB40C-208ENST00000564703 ZNF232Q9UNY5 417 aa14.54□□□□□ -0.08
RAB40C-208ENST00000564703 ZNF835Q9Y2P0 537 aa14.54□□□□□ -0.08
RAB40C-208ENST00000564703 GMEB1Q9Y692 573 aa14.54□□□□□ -0.08
RAB40C-208ENST00000564703 IGLV3-32A0A0A0MS00 114 aa14.53□□□□□ -0.08
RAB40C-208ENST00000564703 A0A0G2JPF8 293 aa14.53□□□□□ -0.08
RAB40C-208ENST00000564703 SERINC4A6NH21 518 aa14.53□□□□□ -0.08
RAB40C-208ENST00000564703 HNRNPCL2B2RXH8 293 aa14.53□□□□□ -0.08
RAB40C-208ENST00000564703 HNRNPCL3B7ZW38 293 aa14.53□□□□□ -0.08
RAB40C-208ENST00000564703 NPIPB9F8W1W9 429 aa14.53□□□□□ -0.08
RAB40C-208ENST00000564703 FBP2O00757 339 aa14.53□□□□□ -0.08
RAB40C-208ENST00000564703 ZNF264O43296 627 aa14.53□□□□□ -0.08
RAB40C-208ENST00000564703 EIF4E2O60573 245 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms