RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 DFNA5O60443 496 aa2.9□□□□□ -1.95
UBR1-205ENST00000564540 IGHDP01880 384 aa2.9□□□□□ -1.95
UBR1-205ENST00000564540 RPL4P36578 427 aaKnown RBP2.9□□□□□ -1.95
UBR1-205ENST00000564540 CD86P42081 329 aa2.9□□□□□ -1.95
UBR1-205ENST00000564540 LINC00315P59091 139 aa2.9□□□□□ -1.95
UBR1-205ENST00000564540 MRPS11P82912 194 aaKnown RBP2.9□□□□□ -1.95
UBR1-205ENST00000564540 MYBPC1Q00872 1141 aa2.9□□□□□ -1.95
UBR1-205ENST00000564540 AANATQ16613 207 aa2.9□□□□□ -1.95
UBR1-205ENST00000564540 LRRC36Q1X8D7 754 aa2.9□□□□□ -1.95
UBR1-205ENST00000564540 TMEM52BQ4KMG9 183 aa2.9□□□□□ -1.95
UBR1-205ENST00000564540 PARP10Q53GL7 1025 aa2.9□□□□□ -1.95
UBR1-205ENST00000564540 RAB12Q6IQ22 244 aa2.9□□□□□ -1.95
UBR1-205ENST00000564540 CNSTQ6PJW8 725 aa2.9□□□□□ -1.95
UBR1-205ENST00000564540 CATSPER4Q7RTX7 472 aa2.9□□□□□ -1.95
UBR1-205ENST00000564540 OR9A4Q8NGU2 314 aa2.9□□□□□ -1.95
UBR1-205ENST00000564540 CCDC47Q96A33 483 aaKnown RBP2.9□□□□□ -1.95
UBR1-205ENST00000564540 TBX15Q96SF7 602 aa2.9□□□□□ -1.95
UBR1-205ENST00000564540 MID1IP1Q9NPA3 183 aa2.9□□□□□ -1.95
UBR1-205ENST00000564540 FANCFQ9NPI8 374 aa2.9□□□□□ -1.95
UBR1-205ENST00000564540 CD274Q9NZQ7 290 aa2.9□□□□□ -1.95
UBR1-205ENST00000564540 HMG20BQ9P0W2 317 aa2.9□□□□□ -1.95
UBR1-205ENST00000564540 ANKMY1Q9P2S6 941 aa2.9□□□□□ -1.95
UBR1-205ENST00000564540 TMCC3Q9ULS5 477 aa2.9□□□□□ -1.95
UBR1-205ENST00000564540 NAP1L2Q9ULW6 460 aaPredicted RBP2.9□□□□□ -1.95
UBR1-205ENST00000564540 PRG3Q9Y2Y8 225 aaPredicted RBP2.9□□□□□ -1.95
UBR1-205ENST00000564540 A0A1B0GUA9 196 aa2.89□□□□□ -1.95
UBR1-205ENST00000564540 CASKO14936 926 aa2.89□□□□□ -1.95
UBR1-205ENST00000564540 TRAF3IP2O43734 574 aaPredicted RBP2.89□□□□□ -1.95
UBR1-205ENST00000564540 SLC4A1P02730 911 aa2.89□□□□□ -1.95
UBR1-205ENST00000564540 IGLL1P15814 213 aa2.89□□□□□ -1.95
UBR1-205ENST00000564540 TSPAN8P19075 237 aa2.89□□□□□ -1.95
UBR1-205ENST00000564540 CD1BP29016 333 aa2.89□□□□□ -1.95
UBR1-205ENST00000564540 HTR5AP47898 357 aa2.89□□□□□ -1.95
UBR1-205ENST00000564540 DHPSP49366 369 aaPredicted RBP2.89□□□□□ -1.95
UBR1-205ENST00000564540 YBEYP58557 167 aaPredicted RBP2.89□□□□□ -1.95
UBR1-205ENST00000564540 TIMM10P62072 90 aa2.89□□□□□ -1.95
UBR1-205ENST00000564540 RPL8P62917 257 aaKnown RBP2.89□□□□□ -1.95
UBR1-205ENST00000564540 VLDLRP98155 873 aa2.89□□□□□ -1.95
UBR1-205ENST00000564540 ACTN3Q08043 901 aaPredicted RBP2.89□□□□□ -1.95
UBR1-205ENST00000564540 ASPHD2Q6ICH7 369 aa2.89□□□□□ -1.95
UBR1-205ENST00000564540 Q7L0L9 218 aa2.89□□□□□ -1.95
UBR1-205ENST00000564540 SERPINA9Q86WD7 417 aa2.89□□□□□ -1.95
UBR1-205ENST00000564540 TEX9Q8N6V9 391 aa2.89□□□□□ -1.95
UBR1-205ENST00000564540 OR2T33Q8NG76 320 aa2.89□□□□□ -1.95
UBR1-205ENST00000564540 EXOC6Q8TAG9 804 aa2.89□□□□□ -1.95
UBR1-205ENST00000564540 C7orf33Q8WU49 177 aa2.89□□□□□ -1.95
UBR1-205ENST00000564540 TAF4BQ92750 862 aa2.89□□□□□ -1.95
UBR1-205ENST00000564540 STARD4Q96DR4 205 aa2.89□□□□□ -1.95
UBR1-205ENST00000564540 EEF2KMTQ96G04 330 aa2.89□□□□□ -1.95
UBR1-205ENST00000564540 NXF3Q9H4D5 531 aaKnown RBP2.89□□□□□ -1.95
UBR1-205ENST00000564540 CAB39LQ9H9S4 337 aa2.89□□□□□ -1.95
UBR1-205ENST00000564540 PATZ1Q9HBE1 687 aaKnown RBP2.89□□□□□ -1.95
UBR1-205ENST00000564540 RBM28Q9NW13 759 aaKnown RBP2.89□□□□□ -1.95
UBR1-205ENST00000564540 BCAP29Q9UHQ4 241 aa2.89□□□□□ -1.95
UBR1-205ENST00000564540 ODF2LQ9ULJ1 636 aa2.89□□□□□ -1.95
UBR1-205ENST00000564540 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.89□□□□□ -1.95
UBR1-205ENST00000564540 IGHV7-81A0A0B4J1V7 117 aa2.88□□□□□ -1.95
UBR1-205ENST00000564540 TRBV2A0A0J9YWF9 115 aa2.88□□□□□ -1.95
UBR1-205ENST00000564540 A0A0J9YXY3 114 aa2.88□□□□□ -1.95
UBR1-205ENST00000564540 TMEM110-MUSTN1A8MSY1 372 aa2.88□□□□□ -1.95
UBR1-205ENST00000564540 ZBTB14O43829 449 aa2.88□□□□□ -1.95
UBR1-205ENST00000564540 IGHV3-48P01763 117 aa2.88□□□□□ -1.95
UBR1-205ENST00000564540 PTMAP06454 111 aaKnown RBP2.88□□□□□ -1.95
UBR1-205ENST00000564540 EMDP50402 254 aa2.88□□□□□ -1.95
UBR1-205ENST00000564540 RND3P61587 244 aa2.88□□□□□ -1.95
UBR1-205ENST00000564540 IL23RQ5VWK5 629 aa2.88□□□□□ -1.95
UBR1-205ENST00000564540 FAM159AQ6UWV7 190 aa2.88□□□□□ -1.95
UBR1-205ENST00000564540 OLFM4Q6UX06 510 aa2.88□□□□□ -1.95
UBR1-205ENST00000564540 TMEM110Q86TL2 294 aa2.88□□□□□ -1.95
UBR1-205ENST00000564540 SYVN1Q86TM6 617 aa2.88□□□□□ -1.95
UBR1-205ENST00000564540 IFNEQ86WN2 208 aa2.88□□□□□ -1.95
UBR1-205ENST00000564540 RDH5Q92781 318 aa2.88□□□□□ -1.95
UBR1-205ENST00000564540 SLC25A36Q96CQ1 311 aa2.88□□□□□ -1.95
UBR1-205ENST00000564540 TMEM101Q96IK0 257 aa2.88□□□□□ -1.95
UBR1-205ENST00000564540 SLC35E1Q96K37 410 aa2.88□□□□□ -1.95
UBR1-205ENST00000564540 CCDC43Q96MW1 224 aaKnown RBP2.88□□□□□ -1.95
UBR1-205ENST00000564540 ATP6V0BQ99437 205 aa2.88□□□□□ -1.95
UBR1-205ENST00000564540 TXN2Q99757 166 aa2.88□□□□□ -1.95
UBR1-205ENST00000564540 NANSQ9NR45 359 aa2.88□□□□□ -1.95
UBR1-205ENST00000564540 TRIM10Q9UDY6 481 aa2.88□□□□□ -1.95
UBR1-205ENST00000564540 ZNF490Q9ULM2 529 aaPredicted RBP2.88□□□□□ -1.95
UBR1-205ENST00000564540 USP16Q9Y5T5 823 aa2.88□□□□□ -1.95
UBR1-205ENST00000564540 IGKV6-21A0A0C4DH24 114 aa2.87□□□□□ -1.95
UBR1-205ENST00000564540 SMIM28A0A1B0GU29 152 aa2.87□□□□□ -1.95
UBR1-205ENST00000564540 TCP11X1B4DZS4 312 aa2.87□□□□□ -1.95
UBR1-205ENST00000564540 KERAO60938 352 aa2.87□□□□□ -1.95
UBR1-205ENST00000564540 B3GALNT1O75752 331 aa2.87□□□□□ -1.95
UBR1-205ENST00000564540 BBOX1O75936 387 aa2.87□□□□□ -1.95
UBR1-205ENST00000564540 HLA-DPA1P20036 260 aa2.87□□□□□ -1.95
UBR1-205ENST00000564540 PRDX6P30041 224 aa2.87□□□□□ -1.95
UBR1-205ENST00000564540 HPDP32754 393 aaPredicted RBP2.87□□□□□ -1.95
UBR1-205ENST00000564540 RPS10P46783 165 aaKnown RBP2.87□□□□□ -1.95
UBR1-205ENST00000564540 NUP107P57740 925 aa2.87□□□□□ -1.95
UBR1-205ENST00000564540 ARF5P84085 180 aa2.87□□□□□ -1.95
UBR1-205ENST00000564540 IL1RL1Q01638 556 aa2.87□□□□□ -1.95
UBR1-205ENST00000564540 C2orf76Q3KRA6 126 aa2.87□□□□□ -1.95
UBR1-205ENST00000564540 CYB5R2Q6BCY4 276 aa2.87□□□□□ -1.95
UBR1-205ENST00000564540 C17orf82Q86X59 251 aaPredicted RBP2.87□□□□□ -1.95
UBR1-205ENST00000564540 ARL6IP6Q8N6S5 226 aa2.87□□□□□ -1.95
UBR1-205ENST00000564540 C20orf203Q8NBC4 194 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms