RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 PRAMEF17Q5VTA0 474 aa17.71■□□□□ 0.43
SMPD3-203ENST00000563226 SLC27A4Q6P1M0 643 aa17.71■□□□□ 0.43
SMPD3-203ENST00000563226 ZNF367Q7RTV3 350 aa17.71■□□□□ 0.43
SMPD3-203ENST00000563226 SLCO6A1Q86UG4 719 aa17.71■□□□□ 0.43
SMPD3-203ENST00000563226 ZNF614Q8N883 585 aa17.71■□□□□ 0.43
SMPD3-203ENST00000563226 Q8N9G6 341 aaPredicted RBP17.71■□□□□ 0.43
SMPD3-203ENST00000563226 OR4Q3Q8NH05 313 aa17.71■□□□□ 0.43
SMPD3-203ENST00000563226 DYNC2LI1Q8TCX1 351 aa17.71■□□□□ 0.43
SMPD3-203ENST00000563226 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.71■□□□□ 0.43
SMPD3-203ENST00000563226 CNOT9Q92600 299 aaKnown RBP17.71■□□□□ 0.43
SMPD3-203ENST00000563226 CRELD1Q96HD1 420 aa17.71■□□□□ 0.43
SMPD3-203ENST00000563226 ZNF582Q96NG8 517 aaPredicted RBP17.71■□□□□ 0.43
SMPD3-203ENST00000563226 DUSP15Q9H1R2 295 aaPredicted RBP17.71■□□□□ 0.43
SMPD3-203ENST00000563226 PLGRKTQ9HBL7 147 aa17.71■□□□□ 0.43
SMPD3-203ENST00000563226 SIT1Q9Y3P8 196 aa17.71■□□□□ 0.43
SMPD3-203ENST00000563226 PMF1-BGLAPU3KQ54 211 aa17.71■□□□□ 0.43
SMPD3-203ENST00000563226 RP1P56715 2156 aa17.7■□□□□ 0.42
SMPD3-203ENST00000563226 TRAPPC13A5PLN9 417 aa17.7■□□□□ 0.42
SMPD3-203ENST00000563226 M0R3G1 203 aa17.7■□□□□ 0.42
SMPD3-203ENST00000563226 CLDN4O14493 209 aa17.7■□□□□ 0.42
SMPD3-203ENST00000563226 CNOT3O75175 753 aaKnown RBP17.7■□□□□ 0.42
SMPD3-203ENST00000563226 CKMT1AP12532 417 aa17.7■□□□□ 0.42
SMPD3-203ENST00000563226 CSF2RBP32927 897 aa17.7■□□□□ 0.42
SMPD3-203ENST00000563226 MOGQ16653 247 aa17.7■□□□□ 0.42
SMPD3-203ENST00000563226 SOWAHCQ53LP3 525 aaPredicted RBP17.7■□□□□ 0.42
SMPD3-203ENST00000563226 MRGPREQ86SM8 312 aa17.7■□□□□ 0.42
SMPD3-203ENST00000563226 ADAMTS18Q8TE60 1221 aa17.7■□□□□ 0.42
SMPD3-203ENST00000563226 CHRNA10Q9GZZ6 450 aa17.7■□□□□ 0.42
SMPD3-203ENST00000563226 IL20RAQ9UHF4 553 aa17.7■□□□□ 0.42
SMPD3-203ENST00000563226 RPL36Q9Y3U8 105 aaKnown RBP17.7■□□□□ 0.42
SMPD3-203ENST00000563226 TMEM150CB9EJG8 249 aa17.7■□□□□ 0.42
SMPD3-203ENST00000563226 AIREO43918 545 aa17.7■□□□□ 0.42
SMPD3-203ENST00000563226 ADAM11O75078 769 aa17.7■□□□□ 0.42
SMPD3-203ENST00000563226 FUT1P19526 365 aa17.7■□□□□ 0.42
SMPD3-203ENST00000563226 GRM7Q14831 915 aa17.7■□□□□ 0.42
SMPD3-203ENST00000563226 ZNHIT3Q15649 155 aaPredicted RBP17.7■□□□□ 0.42
SMPD3-203ENST00000563226 NIPAL1Q6NVV3 410 aa17.7■□□□□ 0.42
SMPD3-203ENST00000563226 SLC30A6Q6NXT4 461 aa17.7■□□□□ 0.42
SMPD3-203ENST00000563226 TTLL10Q6ZVT0 673 aa17.7■□□□□ 0.42
SMPD3-203ENST00000563226 PFN4Q8NHR9 129 aa17.7■□□□□ 0.42
SMPD3-203ENST00000563226 CD180Q99467 661 aa17.7■□□□□ 0.42
SMPD3-203ENST00000563226 OR51E2Q9H255 320 aa17.7■□□□□ 0.42
SMPD3-203ENST00000563226 ZBTB20Q9HC78 741 aaPredicted RBP17.7■□□□□ 0.42
SMPD3-203ENST00000563226 POLE3Q9NRF9 147 aa17.7■□□□□ 0.42
SMPD3-203ENST00000563226 BLACEA4D250 179 aa17.69■□□□□ 0.42
SMPD3-203ENST00000563226 H0YIG0 161 aa17.69■□□□□ 0.42
SMPD3-203ENST00000563226 ZNF749O43361 778 aa17.69■□□□□ 0.42
SMPD3-203ENST00000563226 CH25HO95992 272 aa17.69■□□□□ 0.42
SMPD3-203ENST00000563226 STAT5AP42229 794 aa17.69■□□□□ 0.42
SMPD3-203ENST00000563226 OR1D4P47884 311 aa17.69■□□□□ 0.42
SMPD3-203ENST00000563226 RGS6P49758 472 aa17.69■□□□□ 0.42
SMPD3-203ENST00000563226 SHBQ15464 509 aa17.69■□□□□ 0.42
SMPD3-203ENST00000563226 SLC25A30Q5SVS4 291 aa17.69■□□□□ 0.42
SMPD3-203ENST00000563226 MEDAGQ5VYS4 303 aa17.69■□□□□ 0.42
SMPD3-203ENST00000563226 PAQR6Q6TCH4 344 aa17.69■□□□□ 0.42
SMPD3-203ENST00000563226 ZNF620Q6ZNG0 422 aa17.69■□□□□ 0.42
SMPD3-203ENST00000563226 SLC15A4Q8N697 577 aa17.69■□□□□ 0.42
SMPD3-203ENST00000563226 RCBTB1Q8NDN9 531 aa17.69■□□□□ 0.42
SMPD3-203ENST00000563226 C16orf52Q8NHV5 167 aa17.69■□□□□ 0.42
SMPD3-203ENST00000563226 TMEM163Q8TC26 289 aa17.69■□□□□ 0.42
SMPD3-203ENST00000563226 RNF217Q8TC41 542 aa17.69■□□□□ 0.42
SMPD3-203ENST00000563226 TMEM80Q96HE8 168 aa17.69■□□□□ 0.42
SMPD3-203ENST00000563226 RNF167Q9H6Y7 350 aa17.69■□□□□ 0.42
SMPD3-203ENST00000563226 CUTCQ9NTM9 273 aa17.69■□□□□ 0.42
SMPD3-203ENST00000563226 C20orf141Q9NUB4 165 aa17.69■□□□□ 0.42
SMPD3-203ENST00000563226 TBC1D23Q9NUY8 699 aa17.69■□□□□ 0.42
SMPD3-203ENST00000563226 ZNF223Q9UK11 482 aaPredicted RBP17.69■□□□□ 0.42
SMPD3-203ENST00000563226 LSM2Q9Y333 95 aaKnown RBP17.69■□□□□ 0.42
SMPD3-203ENST00000563226 CORINQ9Y5Q5 1042 aa17.69■□□□□ 0.42
SMPD3-203ENST00000563226 NUDT21O43809 227 aaKnown RBP17.68■□□□□ 0.42
SMPD3-203ENST00000563226 PRKNO60260 465 aaPredicted RBP17.68■□□□□ 0.42
SMPD3-203ENST00000563226 OR2B3O76000 313 aa17.68■□□□□ 0.42
SMPD3-203ENST00000563226 CLPSP04118 112 aa17.68■□□□□ 0.42
SMPD3-203ENST00000563226 IFNA16P05015 189 aa17.68■□□□□ 0.42
SMPD3-203ENST00000563226 OPRL1P41146 370 aa17.68■□□□□ 0.42
SMPD3-203ENST00000563226 HSD17B7P56937 341 aa17.68■□□□□ 0.42
SMPD3-203ENST00000563226 BNC1Q01954 994 aa17.68■□□□□ 0.42
SMPD3-203ENST00000563226 TSTQ16762 297 aaKnown RBP17.68■□□□□ 0.42
SMPD3-203ENST00000563226 WDR45BQ5MNZ6 344 aa17.68■□□□□ 0.42
SMPD3-203ENST00000563226 AP1ARQ63HQ0 302 aa17.68■□□□□ 0.42
SMPD3-203ENST00000563226 SLC34A3Q8N130 599 aa17.68■□□□□ 0.42
SMPD3-203ENST00000563226 MGLLQ99685 303 aa17.68■□□□□ 0.42
SMPD3-203ENST00000563226 LANCL2Q9NS86 450 aa17.68■□□□□ 0.42
SMPD3-203ENST00000563226 IL20Q9NYY1 176 aa17.68■□□□□ 0.42
SMPD3-203ENST00000563226 DHCR7Q9UBM7 475 aaKnown RBP17.68■□□□□ 0.42
SMPD3-203ENST00000563226 ADAMTS20P59510 1910 aa17.68■□□□□ 0.42
SMPD3-203ENST00000563226 A8MU76 341 aa17.68■□□□□ 0.42
SMPD3-203ENST00000563226 J3QRK9 145 aa17.68■□□□□ 0.42
SMPD3-203ENST00000563226 KPNA4O00629 521 aaPredicted RBP17.68■□□□□ 0.42
SMPD3-203ENST00000563226 PRAMEF2O60811 474 aa17.68■□□□□ 0.42
SMPD3-203ENST00000563226 APOL3O95236 402 aa17.68■□□□□ 0.42
SMPD3-203ENST00000563226 NADKO95544 446 aaPredicted RBP17.68■□□□□ 0.42
SMPD3-203ENST00000563226 CT45A8P0DMV1 189 aa17.68■□□□□ 0.42
SMPD3-203ENST00000563226 CT45A9P0DMV2 189 aa17.68■□□□□ 0.42
SMPD3-203ENST00000563226 MAKP20794 623 aa17.68■□□□□ 0.42
SMPD3-203ENST00000563226 DRD5P21918 477 aa17.68■□□□□ 0.42
SMPD3-203ENST00000563226 CSTF2P33240 577 aaKnown RBP eCLIP17.68■□□□□ 0.42
SMPD3-203ENST00000563226 CLK1P49759 484 aaKnown RBP17.68■□□□□ 0.42
SMPD3-203ENST00000563226 FUT7Q11130 342 aa17.68■□□□□ 0.42
SMPD3-203ENST00000563226 NR1D2Q14995 579 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms