RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 CBR1P16152 277 aa12.45□□□□□ -0.42
CLK3-206ENST00000562078 C4BPBP20851 252 aa12.45□□□□□ -0.42
CLK3-206ENST00000562078 NFYAP23511 347 aaPredicted RBP12.45□□□□□ -0.42
CLK3-206ENST00000562078 SOX18P35713 384 aa12.45□□□□□ -0.42
CLK3-206ENST00000562078 CD79BP40259 229 aa12.45□□□□□ -0.42
CLK3-206ENST00000562078 KCNJ5P48544 419 aa12.45□□□□□ -0.42
CLK3-206ENST00000562078 DGKGP49619 791 aa12.45□□□□□ -0.42
CLK3-206ENST00000562078 SELENOWP63302 87 aa12.45□□□□□ -0.42
CLK3-206ENST00000562078 RIPPLY1Q0D2K3 151 aa12.45□□□□□ -0.42
CLK3-206ENST00000562078 TSC22D1Q15714 1073 aa12.45□□□□□ -0.42
CLK3-206ENST00000562078 HAGHLQ6PII5 290 aaPredicted RBP12.45□□□□□ -0.42
CLK3-206ENST00000562078 ADAMTS14Q8WXS8 1223 aa12.45□□□□□ -0.42
CLK3-206ENST00000562078 NARS2Q96I59 477 aaKnown RBP12.45□□□□□ -0.42
CLK3-206ENST00000562078 ARL5BQ96KC2 179 aa12.45□□□□□ -0.42
CLK3-206ENST00000562078 ABHD1Q96SE0 405 aa12.45□□□□□ -0.42
CLK3-206ENST00000562078 RIOK2Q9BVS4 552 aaKnown RBP12.45□□□□□ -0.42
CLK3-206ENST00000562078 ACPTQ9BZG2 426 aa12.45□□□□□ -0.42
CLK3-206ENST00000562078 ACTR6Q9GZN1 396 aa12.45□□□□□ -0.42
CLK3-206ENST00000562078 ACER3Q9NUN7 267 aa12.45□□□□□ -0.42
CLK3-206ENST00000562078 SPHK1Q9NYA1 384 aa12.45□□□□□ -0.42
CLK3-206ENST00000562078 GDE1Q9NZC3 331 aa12.45□□□□□ -0.42
CLK3-206ENST00000562078 OR2AG2A6NM03 316 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 HEPACAM2A8MVW5 462 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 MCRIP1C9JLW8 97 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 GPR31O00270 319 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 DVL2O14641 736 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 SLC19A2O60779 497 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 HTR3BO95264 441 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 IFNA4P05014 189 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 CD3GP09693 182 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 ADH5P11766 374 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 TIMP2P16035 220 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 PVALBP20472 110 aaPredicted RBP12.44□□□□□ -0.42
CLK3-206ENST00000562078 XPAP23025 273 aaPredicted RBP12.44□□□□□ -0.42
CLK3-206ENST00000562078 RFC3P40938 356 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 SNRPGP62308 76 aaKnown RBP12.44□□□□□ -0.42
CLK3-206ENST00000562078 TNFRSF17Q02223 184 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 MESP2Q0VG99 397 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 VEZF1Q14119 521 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 DUOXA1Q1HG43 343 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 IDNKQ5T6J7 187 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 TRIM46Q7Z4K8 759 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 SIAH3Q8IW03 269 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 ARL6IP6Q8N6S5 226 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 BPIFCQ8NFQ6 507 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 NEIL3Q8TAT5 605 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 ASZ1Q8WWH4 475 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 ZNF285Q96NJ3 590 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 RBM14Q96PK6 669 aaKnown RBP12.44□□□□□ -0.42
CLK3-206ENST00000562078 OR4K3Q96R72 315 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 ADAT1Q9BUB4 502 aaKnown RBP12.44□□□□□ -0.42
CLK3-206ENST00000562078 TBC1D17Q9HA65 648 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 NMNAT1Q9HAN9 279 aaPredicted RBP12.44□□□□□ -0.42
CLK3-206ENST00000562078 CLDND1Q9NY35 253 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 ASIC5Q9NY37 505 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 TRPS1Q9UHF7 1281 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 FZD4Q9ULV1 537 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 DOCK8Q8NF50 2099 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 MANBAO00462 879 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 RECKO95980 971 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 ADH1CP00326 375 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 SDC1P18827 310 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 EPORP19235 508 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 CHI3L1P36222 383 aaPredicted RBP12.44□□□□□ -0.42
CLK3-206ENST00000562078 KIR3DL1P43629 444 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 EPHA4P54764 986 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 WNT4P56705 351 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 CPSF6Q16630 551 aaKnown RBP eCLIP12.44□□□□□ -0.42
CLK3-206ENST00000562078 ZXDCQ2QGD7 858 aaPredicted RBP12.44□□□□□ -0.42
CLK3-206ENST00000562078 DEF8Q6ZN54 512 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 NR2C2APQ86WQ0 139 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 MARCH9Q86YJ5 346 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 RELL2Q8NC24 303 aaPredicted RBP12.44□□□□□ -0.42
CLK3-206ENST00000562078 NTMT1Q9BV86 223 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 OSGEPL1Q9H4B0 414 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 CA10Q9NS85 328 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 GPN3Q9UHW5 284 aaPredicted RBP12.44□□□□□ -0.42
CLK3-206ENST00000562078 LHX6Q9UPM6 363 aa12.44□□□□□ -0.42
CLK3-206ENST00000562078 TSPAN11A1L157 253 aa12.43□□□□□ -0.42
CLK3-206ENST00000562078 GSAPA4D1B5 854 aa12.43□□□□□ -0.42
CLK3-206ENST00000562078 SUSD5O60279 629 aa12.43□□□□□ -0.42
CLK3-206ENST00000562078 RP2O75695 350 aa12.43□□□□□ -0.42
CLK3-206ENST00000562078 HPP00738 406 aa12.43□□□□□ -0.42
CLK3-206ENST00000562078 MT-ND4P03905 459 aa12.43□□□□□ -0.42
CLK3-206ENST00000562078 C8GP07360 202 aa12.43□□□□□ -0.42
CLK3-206ENST00000562078 EBLN1P0CF75 366 aa12.43□□□□□ -0.42
CLK3-206ENST00000562078 SMIM6P0DI80 62 aa12.43□□□□□ -0.42
CLK3-206ENST00000562078 HSD3B1P14060 373 aa12.43□□□□□ -0.42
CLK3-206ENST00000562078 FGF9P31371 208 aaPredicted RBP12.43□□□□□ -0.42
CLK3-206ENST00000562078 GABRA5P31644 462 aa12.43□□□□□ -0.42
CLK3-206ENST00000562078 ACSL1P33121 698 aa12.43□□□□□ -0.42
CLK3-206ENST00000562078 ZNF805Q5CZA5 627 aa12.43□□□□□ -0.42
CLK3-206ENST00000562078 HENMT1Q5T8I9 393 aaKnown RBP12.43□□□□□ -0.42
CLK3-206ENST00000562078 PYHIN1Q6K0P9 492 aa12.43□□□□□ -0.42
CLK3-206ENST00000562078 SEZ6L2Q6UXD5 910 aa12.43□□□□□ -0.42
CLK3-206ENST00000562078 LDLRAD3Q86YD5 345 aa12.43□□□□□ -0.42
CLK3-206ENST00000562078 L3MBTL4Q8NA19 623 aa12.43□□□□□ -0.42
CLK3-206ENST00000562078 GLYATL2Q8WU03 294 aa12.43□□□□□ -0.42
CLK3-206ENST00000562078 ASB11Q8WXH4 323 aa12.43□□□□□ -0.42
CLK3-206ENST00000562078 PAPOLGQ9BWT3 736 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms