RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 AGAP20933 346 aa13.85□□□□□ -0.19
SNRPA1-213ENST00000560856 CLK3P49761 638 aaKnown RBP13.85□□□□□ -0.19
SNRPA1-213ENST00000560856 ATP4BP51164 291 aa13.85□□□□□ -0.19
SNRPA1-213ENST00000560856 MVDP53602 400 aa13.85□□□□□ -0.19
SNRPA1-213ENST00000560856 DSCR4P56555 118 aaPredicted RBP13.85□□□□□ -0.19
SNRPA1-213ENST00000560856 NUP107P57740 925 aa13.85□□□□□ -0.19
SNRPA1-213ENST00000560856 FUT5Q11128 374 aa13.85□□□□□ -0.19
SNRPA1-213ENST00000560856 CD226Q15762 336 aa13.85□□□□□ -0.19
SNRPA1-213ENST00000560856 TMEM44Q2T9K0 475 aa13.85□□□□□ -0.19
SNRPA1-213ENST00000560856 ARHGAP11BQ3KRB8 267 aa13.85□□□□□ -0.19
SNRPA1-213ENST00000560856 TIGD2Q4W5G0 525 aa13.85□□□□□ -0.19
SNRPA1-213ENST00000560856 KLHL26Q53HC5 615 aa13.85□□□□□ -0.19
SNRPA1-213ENST00000560856 HIST2H2BCQ6DN03 193 aa13.85□□□□□ -0.19
SNRPA1-213ENST00000560856 TNFAIP8L2Q6P589 184 aaPredicted RBP13.85□□□□□ -0.19
SNRPA1-213ENST00000560856 XKRXQ6PP77 449 aa13.85□□□□□ -0.19
SNRPA1-213ENST00000560856 BLOC1S3Q6QNY0 202 aa13.85□□□□□ -0.19
SNRPA1-213ENST00000560856 ZNF621Q6ZSS3 439 aa13.85□□□□□ -0.19
SNRPA1-213ENST00000560856 SEM1Q6ZVN7 128 aa13.85□□□□□ -0.19
SNRPA1-213ENST00000560856 MAMDC2Q7Z304 686 aaPredicted RBP13.85□□□□□ -0.19
SNRPA1-213ENST00000560856 EID3Q8N140 333 aa13.85□□□□□ -0.19
SNRPA1-213ENST00000560856 ARFGAP2Q8N6H7 521 aa13.85□□□□□ -0.19
SNRPA1-213ENST00000560856 OR14L1PQ8NHC6 308 aa13.85□□□□□ -0.19
SNRPA1-213ENST00000560856 ZFP90Q8TF47 636 aa13.85□□□□□ -0.19
SNRPA1-213ENST00000560856 GTF2H4Q92759 462 aa13.85□□□□□ -0.19
SNRPA1-213ENST00000560856 RAB8BQ92930 207 aa13.85□□□□□ -0.19
SNRPA1-213ENST00000560856 TTYH2Q9BSA4 534 aa13.85□□□□□ -0.19
SNRPA1-213ENST00000560856 DCTN4Q9UJW0 460 aa13.85□□□□□ -0.19
SNRPA1-213ENST00000560856 CACNA1CQ13936 2221 aa13.84□□□□□ -0.19
SNRPA1-213ENST00000560856 HMGN4O00479 90 aa13.84□□□□□ -0.19
SNRPA1-213ENST00000560856 RFXANKO14593 260 aa13.84□□□□□ -0.19
SNRPA1-213ENST00000560856 OIP5O43482 229 aa13.84□□□□□ -0.19
SNRPA1-213ENST00000560856 NDUFB5O43674 189 aa13.84□□□□□ -0.19
SNRPA1-213ENST00000560856 FCMRO60667 390 aa13.84□□□□□ -0.19
SNRPA1-213ENST00000560856 ACTL6AO96019 429 aa13.84□□□□□ -0.19
SNRPA1-213ENST00000560856 GUSBP08236 651 aa13.84□□□□□ -0.19
SNRPA1-213ENST00000560856 HOXD4P09016 255 aaPredicted RBP13.84□□□□□ -0.19
SNRPA1-213ENST00000560856 GLI4P10075 376 aa13.84□□□□□ -0.19
SNRPA1-213ENST00000560856 GABRA1P14867 456 aa13.84□□□□□ -0.19
SNRPA1-213ENST00000560856 CPN1P15169 458 aa13.84□□□□□ -0.19
SNRPA1-213ENST00000560856 DCTP40126 519 aa13.84□□□□□ -0.19
SNRPA1-213ENST00000560856 ATP12AP54707 1039 aa13.84□□□□□ -0.19
SNRPA1-213ENST00000560856 PMPCAQ10713 525 aa13.84□□□□□ -0.19
SNRPA1-213ENST00000560856 ART3Q13508 389 aa13.84□□□□□ -0.19
SNRPA1-213ENST00000560856 RCAN2Q14206 197 aa13.84□□□□□ -0.19
SNRPA1-213ENST00000560856 GTDC1Q4AE62 458 aa13.84□□□□□ -0.19
SNRPA1-213ENST00000560856 COX20Q5RI15 118 aa13.84□□□□□ -0.19
SNRPA1-213ENST00000560856 C1orf185Q5T7R7 199 aa13.84□□□□□ -0.19
SNRPA1-213ENST00000560856 TMEM211Q6ICI0 200 aa13.84□□□□□ -0.19
SNRPA1-213ENST00000560856 CGB2Q6NT52 195 aa13.84□□□□□ -0.19
SNRPA1-213ENST00000560856 RNF130Q86XS8 419 aa13.84□□□□□ -0.19
SNRPA1-213ENST00000560856 GATSQ8NAP1 163 aa13.84□□□□□ -0.19
SNRPA1-213ENST00000560856 XAGE5Q8WWM1 108 aa13.84□□□□□ -0.19
SNRPA1-213ENST00000560856 C1GALT1C1Q96EU7 318 aa13.84□□□□□ -0.19
SNRPA1-213ENST00000560856 ZNF350Q9GZX5 532 aa13.84□□□□□ -0.19
SNRPA1-213ENST00000560856 HOXD1Q9GZZ0 328 aa13.84□□□□□ -0.19
SNRPA1-213ENST00000560856 SAP130Q9H0E3 1048 aa13.84□□□□□ -0.19
SNRPA1-213ENST00000560856 CCDC134Q9H6E4 229 aa13.84□□□□□ -0.19
SNRPA1-213ENST00000560856 NPHS2Q9NP85 383 aa13.84□□□□□ -0.19
SNRPA1-213ENST00000560856 TMEM45AQ9NWC5 275 aa13.84□□□□□ -0.19
SNRPA1-213ENST00000560856 NBPF19A0A087WUL8 3843 aa13.83□□□□□ -0.19
SNRPA1-213ENST00000560856 CENPVL1A0A0U1RR11 272 aa13.83□□□□□ -0.2
SNRPA1-213ENST00000560856 AHRRA9YTQ3 701 aa13.83□□□□□ -0.2
SNRPA1-213ENST00000560856 AK1P00568 194 aa13.83□□□□□ -0.2
SNRPA1-213ENST00000560856 ATP6V1C1P21283 382 aa13.83□□□□□ -0.2
SNRPA1-213ENST00000560856 CHMP24386 653 aa13.83□□□□□ -0.2
SNRPA1-213ENST00000560856 COL8A1P27658 744 aa13.83□□□□□ -0.2
SNRPA1-213ENST00000560856 MSX1P28360 303 aa13.83□□□□□ -0.2
SNRPA1-213ENST00000560856 CHI3L1P36222 383 aaPredicted RBP13.83□□□□□ -0.2
SNRPA1-213ENST00000560856 ADH7P40394 386 aa13.83□□□□□ -0.2
SNRPA1-213ENST00000560856 STARP49675 285 aa13.83□□□□□ -0.2
SNRPA1-213ENST00000560856 LHX2P50458 406 aa13.83□□□□□ -0.2
SNRPA1-213ENST00000560856 SMSP52788 366 aa13.83□□□□□ -0.2
SNRPA1-213ENST00000560856 STX1BP61266 288 aa13.83□□□□□ -0.2
SNRPA1-213ENST00000560856 IRX1P78414 480 aaPredicted RBP13.83□□□□□ -0.2
SNRPA1-213ENST00000560856 GUCY1A3Q02108 690 aa13.83□□□□□ -0.2
SNRPA1-213ENST00000560856 GANABQ14697 944 aaKnown RBP13.83□□□□□ -0.2
SNRPA1-213ENST00000560856 ZNF141Q15928 474 aa13.83□□□□□ -0.2
SNRPA1-213ENST00000560856 FLYWCH1Q4VC44 716 aa13.83□□□□□ -0.2
SNRPA1-213ENST00000560856 HSP90B2PQ58FF3 399 aa13.83□□□□□ -0.2
SNRPA1-213ENST00000560856 ARSKQ6UWY0 536 aa13.83□□□□□ -0.2
SNRPA1-213ENST00000560856 B3GNT6Q6ZMB0 384 aa13.83□□□□□ -0.2
SNRPA1-213ENST00000560856 IFNEQ86WN2 208 aa13.83□□□□□ -0.2
SNRPA1-213ENST00000560856 TRIML2Q8N7C3 387 aa13.83□□□□□ -0.2
SNRPA1-213ENST00000560856 ITCHQ96J02 903 aa13.83□□□□□ -0.2
SNRPA1-213ENST00000560856 NMUR2Q9GZQ4 415 aa13.83□□□□□ -0.2
SNRPA1-213ENST00000560856 PAIP1Q9H074 479 aaKnown RBP13.83□□□□□ -0.2
SNRPA1-213ENST00000560856 FGFR1OP2Q9NVK5 253 aa13.83□□□□□ -0.2
SNRPA1-213ENST00000560856 ALKBH4Q9NXW9 302 aa13.83□□□□□ -0.2
SNRPA1-213ENST00000560856 DKKL1Q9UK85 242 aa13.83□□□□□ -0.2
SNRPA1-213ENST00000560856 RPH3AQ9Y2J0 694 aaPredicted RBP13.83□□□□□ -0.2
SNRPA1-213ENST00000560856 KIAA1549Q9HCM3 1950 aa13.82□□□□□ -0.2
SNRPA1-213ENST00000560856 CYSRT1A8MQ03 144 aa13.82□□□□□ -0.2
SNRPA1-213ENST00000560856 SCDO00767 359 aa13.82□□□□□ -0.2
SNRPA1-213ENST00000560856 STX11O75558 287 aa13.82□□□□□ -0.2
SNRPA1-213ENST00000560856 TOXO94900 526 aa13.82□□□□□ -0.2
SNRPA1-213ENST00000560856 EPPINO95925 133 aa13.82□□□□□ -0.2
SNRPA1-213ENST00000560856 AGR2O95994 175 aa13.82□□□□□ -0.2
SNRPA1-213ENST00000560856 HK1P19367 917 aa13.82□□□□□ -0.2
SNRPA1-213ENST00000560856 CAPN3P20807 821 aa13.82□□□□□ -0.2
SNRPA1-213ENST00000560856 TCEA1P23193 301 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms