RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 HHATLQ9HCP6 504 aa15.86■□□□□ 0.13
TSPAN3-208ENST00000560514 FARSBQ9NSD9 589 aaKnown RBP15.86■□□□□ 0.13
TSPAN3-208ENST00000560514 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.86■□□□□ 0.13
TSPAN3-208ENST00000560514 A0A087WZY1 265 aa15.85■□□□□ 0.13
TSPAN3-208ENST00000560514 GNG14A0A1W2PPG7 69 aa15.85■□□□□ 0.13
TSPAN3-208ENST00000560514 GCM2O75603 506 aaPredicted RBP15.85■□□□□ 0.13
TSPAN3-208ENST00000560514 ANGPTL1O95841 491 aa15.85■□□□□ 0.13
TSPAN3-208ENST00000560514 IL3P08700 152 aa15.85■□□□□ 0.13
TSPAN3-208ENST00000560514 ZNF16P17020 682 aaPredicted RBP15.85■□□□□ 0.13
TSPAN3-208ENST00000560514 HNF1AP20823 631 aa15.85■□□□□ 0.13
TSPAN3-208ENST00000560514 TYK2P29597 1187 aa15.85■□□□□ 0.13
TSPAN3-208ENST00000560514 C21orf58P58505 322 aa15.85■□□□□ 0.13
TSPAN3-208ENST00000560514 TRAF3Q13114 568 aa15.85■□□□□ 0.13
TSPAN3-208ENST00000560514 HEPACAMQ14CZ8 416 aa15.85■□□□□ 0.13
TSPAN3-208ENST00000560514 RAB35Q15286 201 aa15.85■□□□□ 0.13
TSPAN3-208ENST00000560514 TMEM44Q2T9K0 475 aa15.85■□□□□ 0.13
TSPAN3-208ENST00000560514 GGTA1PQ4G0N0 100 aa15.85■□□□□ 0.13
TSPAN3-208ENST00000560514 ATG4DQ86TL0 474 aaPredicted RBP15.85■□□□□ 0.13
TSPAN3-208ENST00000560514 GABRG1Q8N1C3 465 aa15.85■□□□□ 0.13
TSPAN3-208ENST00000560514 GPR78Q96P69 363 aa15.85■□□□□ 0.13
TSPAN3-208ENST00000560514 CACNG6Q9BXT2 260 aa15.85■□□□□ 0.13
TSPAN3-208ENST00000560514 C3orf14Q9HBI5 128 aa15.85■□□□□ 0.13
TSPAN3-208ENST00000560514 SLC35C2Q9NQQ7 365 aa15.85■□□□□ 0.13
TSPAN3-208ENST00000560514 KCNS2Q9ULS6 477 aa15.85■□□□□ 0.13
TSPAN3-208ENST00000560514 TMCO1Q9UM00 188 aa15.85■□□□□ 0.13
TSPAN3-208ENST00000560514 A0A096LNT2 108 aa15.84■□□□□ 0.13
TSPAN3-208ENST00000560514 A0A096LPK6 155 aa15.84■□□□□ 0.13
TSPAN3-208ENST00000560514 DPRXA6NFQ7 191 aa15.84■□□□□ 0.13
TSPAN3-208ENST00000560514 ADAMDEC1O15204 470 aa15.84■□□□□ 0.13
TSPAN3-208ENST00000560514 IL33O95760 270 aa15.84■□□□□ 0.13
TSPAN3-208ENST00000560514 OTCP00480 354 aa15.84■□□□□ 0.13
TSPAN3-208ENST00000560514 ADAP00813 363 aa15.84■□□□□ 0.13
TSPAN3-208ENST00000560514 PTNP21246 168 aa15.84■□□□□ 0.13
TSPAN3-208ENST00000560514 CARD18P57730 90 aa15.84■□□□□ 0.13
TSPAN3-208ENST00000560514 RAC1P63000 192 aa15.84■□□□□ 0.13
TSPAN3-208ENST00000560514 P2RY6Q15077 328 aa15.84■□□□□ 0.13
TSPAN3-208ENST00000560514 RNPS1Q15287 305 aaKnown RBP15.84■□□□□ 0.13
TSPAN3-208ENST00000560514 STK11Q15831 433 aa15.84■□□□□ 0.13
TSPAN3-208ENST00000560514 C8orf74Q6P047 294 aa15.84■□□□□ 0.13
TSPAN3-208ENST00000560514 TFAP2EQ6VUC0 442 aa15.84■□□□□ 0.13
TSPAN3-208ENST00000560514 ROBO4Q8WZ75 1007 aa15.84■□□□□ 0.13
TSPAN3-208ENST00000560514 FAM168AQ92567 244 aa15.84■□□□□ 0.13
TSPAN3-208ENST00000560514 SLC9A6Q92581 669 aa15.84■□□□□ 0.13
TSPAN3-208ENST00000560514 OSTF1Q92882 214 aa15.84■□□□□ 0.13
TSPAN3-208ENST00000560514 MUCL1Q96DR8 90 aa15.84■□□□□ 0.13
TSPAN3-208ENST00000560514 ADGRG7Q96K78 797 aa15.84■□□□□ 0.13
TSPAN3-208ENST00000560514 NSUN5Q96P11 429 aaKnown RBP15.84■□□□□ 0.13
TSPAN3-208ENST00000560514 ACSS3Q9H6R3 686 aa15.84■□□□□ 0.13
TSPAN3-208ENST00000560514 TMEM185BQ9H7F4 350 aa15.84■□□□□ 0.13
TSPAN3-208ENST00000560514 TIGARQ9NQ88 270 aa15.84■□□□□ 0.13
TSPAN3-208ENST00000560514 VPS29Q9UBQ0 182 aa15.84■□□□□ 0.13
TSPAN3-208ENST00000560514 MCM8Q9UJA3 840 aa15.84■□□□□ 0.13
TSPAN3-208ENST00000560514 PCTPQ9UKL6 214 aa15.84■□□□□ 0.13
TSPAN3-208ENST00000560514 FREM1Q5H8C1 2179 aa15.83■□□□□ 0.13
TSPAN3-208ENST00000560514 IGLV3-32A0A0A0MS00 114 aa15.83■□□□□ 0.12
TSPAN3-208ENST00000560514 ELOA3DA6NLF2 546 aaPredicted RBP15.83■□□□□ 0.12
TSPAN3-208ENST00000560514 STX16-NPEPL1H3BU86 382 aa15.83■□□□□ 0.12
TSPAN3-208ENST00000560514 STX16O14662 325 aa15.83■□□□□ 0.12
TSPAN3-208ENST00000560514 WIPF1O43516 503 aa15.83■□□□□ 0.12
TSPAN3-208ENST00000560514 PCDH7O60245 1069 aa15.83■□□□□ 0.12
TSPAN3-208ENST00000560514 RAMP1O60894 148 aa15.83■□□□□ 0.12
TSPAN3-208ENST00000560514 SMIM24O75264 130 aa15.83■□□□□ 0.12
TSPAN3-208ENST00000560514 UTS2O95399 124 aa15.83■□□□□ 0.12
TSPAN3-208ENST00000560514 RBP1P09455 135 aa15.83■□□□□ 0.12
TSPAN3-208ENST00000560514 COL6A2P12110 1019 aa15.83■□□□□ 0.12
TSPAN3-208ENST00000560514 SERPINB8P50452 374 aa15.83■□□□□ 0.12
TSPAN3-208ENST00000560514 ZNF41P51814 821 aaPredicted RBP15.83■□□□□ 0.12
TSPAN3-208ENST00000560514 SLC7A5Q01650 507 aa15.83■□□□□ 0.12
TSPAN3-208ENST00000560514 CSTF3Q12996 717 aaKnown RBP15.83■□□□□ 0.12
TSPAN3-208ENST00000560514 ITGADQ13349 1161 aa15.83■□□□□ 0.12
TSPAN3-208ENST00000560514 PPA1Q15181 289 aa15.83■□□□□ 0.12
TSPAN3-208ENST00000560514 WHAMMP3Q1A5X7 153 aa15.83■□□□□ 0.12
TSPAN3-208ENST00000560514 ELOA3BQ3SY89 546 aa15.83■□□□□ 0.12
TSPAN3-208ENST00000560514 BHLHA15Q7RTS1 189 aaPredicted RBP15.83■□□□□ 0.12
TSPAN3-208ENST00000560514 GTPBP8Q8N3Z3 284 aaPredicted RBP15.83■□□□□ 0.12
TSPAN3-208ENST00000560514 ARIH2OSQ8N7S6 290 aa15.83■□□□□ 0.12
TSPAN3-208ENST00000560514 CDYL2Q8N8U2 506 aa15.83■□□□□ 0.12
TSPAN3-208ENST00000560514 ELOA3Q8NG57 546 aa15.83■□□□□ 0.12
TSPAN3-208ENST00000560514 ZBTB8AQ96BR9 441 aa15.83■□□□□ 0.12
TSPAN3-208ENST00000560514 HBEGFQ99075 208 aa15.83■□□□□ 0.12
TSPAN3-208ENST00000560514 MANSC1Q9H8J5 431 aa15.83■□□□□ 0.12
TSPAN3-208ENST00000560514 CHODLQ9H9P2 273 aa15.83■□□□□ 0.12
TSPAN3-208ENST00000560514 POU2F3Q9UKI9 436 aa15.83■□□□□ 0.12
TSPAN3-208ENST00000560514 A0A0J9YW62 118 aa15.82■□□□□ 0.12
TSPAN3-208ENST00000560514 ABCD4O14678 606 aa15.82■□□□□ 0.12
TSPAN3-208ENST00000560514 SLITRK5O94991 958 aa15.82■□□□□ 0.12
TSPAN3-208ENST00000560514 KCNH1O95259 989 aa15.82■□□□□ 0.12
TSPAN3-208ENST00000560514 NTN1O95631 604 aa15.82■□□□□ 0.12
TSPAN3-208ENST00000560514 GZMKP49863 264 aa15.82■□□□□ 0.12
TSPAN3-208ENST00000560514 SERPINB9P50453 376 aa15.82■□□□□ 0.12
TSPAN3-208ENST00000560514 IRX1P78414 480 aaPredicted RBP15.82■□□□□ 0.12
TSPAN3-208ENST00000560514 PRR5P85299 388 aa15.82■□□□□ 0.12
TSPAN3-208ENST00000560514 TECRLQ5HYJ1 363 aa15.82■□□□□ 0.12
TSPAN3-208ENST00000560514 FAM166AQ6J272 317 aa15.82■□□□□ 0.12
TSPAN3-208ENST00000560514 SSX8Q7RTT4 187 aa15.82■□□□□ 0.12
TSPAN3-208ENST00000560514 NUFIP2Q7Z417 695 aaKnown RBP15.82■□□□□ 0.12
TSPAN3-208ENST00000560514 TUSC5Q8IXB3 177 aa15.82■□□□□ 0.12
TSPAN3-208ENST00000560514 FBXL14Q8N1E6 418 aa15.82■□□□□ 0.12
TSPAN3-208ENST00000560514 MMGT1Q8N4V1 131 aa15.82■□□□□ 0.12
TSPAN3-208ENST00000560514 ZNF525Q8N782 197 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms