RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 CASRP41180 1078 aa13.55□□□□□ -0.24
SNRPA1-207ENST00000559309 FGFBP1Q14512 234 aa13.55□□□□□ -0.24
SNRPA1-207ENST00000559309 HYAL4Q2M3T9 481 aa13.55□□□□□ -0.24
SNRPA1-207ENST00000559309 FLYWCH1Q4VC44 716 aa13.55□□□□□ -0.24
SNRPA1-207ENST00000559309 RPS26P11Q5JNZ5 115 aaPredicted RBP13.55□□□□□ -0.24
SNRPA1-207ENST00000559309 TBCELQ5QJ74 424 aa13.55□□□□□ -0.24
SNRPA1-207ENST00000559309 SLC22A10Q63ZE4 541 aa13.55□□□□□ -0.24
SNRPA1-207ENST00000559309 SLC25A25Q6KCM7 469 aa13.55□□□□□ -0.24
SNRPA1-207ENST00000559309 SLC30A6Q6NXT4 461 aa13.55□□□□□ -0.24
SNRPA1-207ENST00000559309 GALNT10Q86SR1 603 aa13.55□□□□□ -0.24
SNRPA1-207ENST00000559309 ZNF843Q8N446 348 aa13.55□□□□□ -0.24
SNRPA1-207ENST00000559309 C9orf43Q8TAL5 461 aaPredicted RBP13.55□□□□□ -0.24
SNRPA1-207ENST00000559309 TMEM41AQ96HV5 264 aa13.55□□□□□ -0.24
SNRPA1-207ENST00000559309 HES7Q9BYE0 225 aa13.55□□□□□ -0.24
SNRPA1-207ENST00000559309 TIMMDC1Q9NPL8 285 aa13.55□□□□□ -0.24
SNRPA1-207ENST00000559309 HRH3Q9Y5N1 445 aa13.55□□□□□ -0.24
SNRPA1-207ENST00000559309 TRAV17A0A0B4J275 112 aa13.54□□□□□ -0.24
SNRPA1-207ENST00000559309 PRAMEF25A6NGN4 478 aa13.54□□□□□ -0.24
SNRPA1-207ENST00000559309 DPM1O60762 260 aa13.54□□□□□ -0.24
SNRPA1-207ENST00000559309 DNAJC8O75937 253 aaPredicted RBP13.54□□□□□ -0.24
SNRPA1-207ENST00000559309 MFN2O95140 757 aa13.54□□□□□ -0.24
SNRPA1-207ENST00000559309 F10P00742 488 aa13.54□□□□□ -0.24
SNRPA1-207ENST00000559309 PLA2G2AP14555 144 aa13.54□□□□□ -0.24
SNRPA1-207ENST00000559309 GGT1P19440 569 aa13.54□□□□□ -0.24
SNRPA1-207ENST00000559309 CNR1P21554 472 aa13.54□□□□□ -0.24
SNRPA1-207ENST00000559309 RASSF2P50749 326 aa13.54□□□□□ -0.24
SNRPA1-207ENST00000559309 EEF1A1P68104 462 aaKnown RBP13.54□□□□□ -0.24
SNRPA1-207ENST00000559309 RPP38P78345 283 aaKnown RBP13.54□□□□□ -0.24
SNRPA1-207ENST00000559309 ARG2P78540 354 aa13.54□□□□□ -0.24
SNRPA1-207ENST00000559309 ELOAQ14241 798 aaKnown RBP13.54□□□□□ -0.24
SNRPA1-207ENST00000559309 CD226Q15762 336 aa13.54□□□□□ -0.24
SNRPA1-207ENST00000559309 GPAT3Q53EU6 434 aa13.54□□□□□ -0.24
SNRPA1-207ENST00000559309 RNF220Q5VTB9 566 aa13.54□□□□□ -0.24
SNRPA1-207ENST00000559309 BICRALQ6AI39 1079 aa13.54□□□□□ -0.24
SNRPA1-207ENST00000559309 CCDC121Q6ZUS5 278 aa13.54□□□□□ -0.24
SNRPA1-207ENST00000559309 ASB18Q6ZVZ8 466 aa13.54□□□□□ -0.24
SNRPA1-207ENST00000559309 GRAMD2AQ8IUY3 354 aa13.54□□□□□ -0.24
SNRPA1-207ENST00000559309 ZADH2Q8N4Q0 377 aa13.54□□□□□ -0.24
SNRPA1-207ENST00000559309 Q8NA96 180 aa13.54□□□□□ -0.24
SNRPA1-207ENST00000559309 FAM13CQ8NE31 585 aa13.54□□□□□ -0.24
SNRPA1-207ENST00000559309 QRSL1Q9H0R6 528 aaKnown RBP13.54□□□□□ -0.24
SNRPA1-207ENST00000559309 GORASP2Q9H8Y8 452 aa13.54□□□□□ -0.24
SNRPA1-207ENST00000559309 SACM1LQ9NTJ5 587 aa13.54□□□□□ -0.24
SNRPA1-207ENST00000559309 DTNAQ9Y4J8 743 aa13.54□□□□□ -0.24
SNRPA1-207ENST00000559309 SPTA1P02549 2419 aa13.54□□□□□ -0.24
SNRPA1-207ENST00000559309 NPIPA5A0A0B4J1W7 369 aa13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 A0A0G2JMM0 328 aa13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 A0A1W2PPB8 328 aa13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 A0A1W2PRS3 328 aa13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 TMEM247A6NEH6 219 aa13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 LRRC3CA6NJW4 275 aa13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 KIR3DP1A8MWS1 328 aa13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 NPIPA7E9PJI5 369 aa13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 ACOT8O14734 319 aa13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 GYG2O15488 501 aa13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 SORBS2O94875 1100 aaKnown RBP13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 GLSO94925 669 aaPredicted RBP13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 SNX4O95219 450 aa13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 DBIP07108 87 aaKnown RBP13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 PABPC4LP0CB38 370 aaKnown RBP13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 NPIPA8P0DM63 369 aa13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 SFTPCP11686 197 aa13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 NID1P14543 1247 aa13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 CD247P20963 164 aa13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 ATP6V1C1P21283 382 aa13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 KDELR2P33947 212 aa13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 PGM1P36871 562 aa13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 MXRA7P84157 204 aa13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 OC90Q02509 493 aaPredicted RBP13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 GPR68Q15743 365 aa13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 ZNF766Q5HY98 468 aa13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 PDZK1Q5T2W1 519 aa13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 INTS11Q5TA45 600 aaKnown RBP13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 DHRS4L2Q6PKH6 230 aa13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 PATL1Q86TB9 770 aaKnown RBP13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 CMIPQ8IY22 773 aa13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 FADS6Q8N9I5 356 aa13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 WDSUB1Q8N9V3 476 aa13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 ZFP62Q8NB50 900 aaPredicted RBP13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 FAM156AQ8NDB6 213 aa13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 OR2M7Q8NG81 312 aa13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 SLC35B4Q969S0 331 aa13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 UTP4Q969X6 686 aaKnown RBP13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 PNPLA2Q96AD5 504 aa13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 TAMM41Q96BW9 452 aa13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 KCTD14Q9BQ13 255 aaPredicted RBP13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 OSBPL11Q9BXB4 747 aa13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 SLC25A18Q9H1K4 315 aa13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 UBQLN3Q9H347 655 aa13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 MMADHCQ9H3L0 296 aaPredicted RBP13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 PIF1Q9H611 641 aa13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 ADA2Q9NZK5 511 aa13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 PACSIN3Q9UKS6 424 aa13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 ANGPT4Q9Y264 503 aa13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 B3GNT3Q9Y2A9 372 aa13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 WIF1Q9Y5W5 379 aa13.53□□□□□ -0.24
SNRPA1-207ENST00000559309 CDHR4A6H8M9 788 aa13.52□□□□□ -0.25
SNRPA1-207ENST00000559309 PINLYPA6NC86 204 aa13.52□□□□□ -0.25
SNRPA1-207ENST00000559309 SERINC4A6NH21 518 aa13.52□□□□□ -0.25
SNRPA1-207ENST00000559309 M0QX08 132 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms