RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 KLHL26Q53HC5 615 aa19.44■□□□□ 0.7
CASC4-204ENST00000557945 RPUSD3Q6P087 351 aaKnown RBP19.44■□□□□ 0.7
CASC4-204ENST00000557945 C6orf89Q6UWU4 347 aa19.44■□□□□ 0.7
CASC4-204ENST00000557945 HIPK4Q8NE63 616 aa19.44■□□□□ 0.7
CASC4-204ENST00000557945 OR2T12Q8NG77 320 aa19.44■□□□□ 0.7
CASC4-204ENST00000557945 BBS10Q8TAM1 723 aa19.44■□□□□ 0.7
CASC4-204ENST00000557945 ZG16BQ96DA0 208 aa19.44■□□□□ 0.7
CASC4-204ENST00000557945 REXO5Q96IC2 774 aaKnown RBP19.44■□□□□ 0.7
CASC4-204ENST00000557945 ZNF597Q96LX8 424 aa19.44■□□□□ 0.7
CASC4-204ENST00000557945 RTN4RQ9BZR6 473 aa19.44■□□□□ 0.7
CASC4-204ENST00000557945 DTNAQ9Y4J8 743 aa19.44■□□□□ 0.7
CASC4-204ENST00000557945 EML6Q6ZMW3 1958 aa19.44■□□□□ 0.7
CASC4-204ENST00000557945 CENPVL1A0A0U1RR11 272 aa19.44■□□□□ 0.7
CASC4-204ENST00000557945 FAM220BPB1ANY3 271 aa19.44■□□□□ 0.7
CASC4-204ENST00000557945 ALG1L2C9J202 215 aa19.44■□□□□ 0.7
CASC4-204ENST00000557945 H3BNH8 94 aa19.44■□□□□ 0.7
CASC4-204ENST00000557945 GNB5O14775 395 aa19.44■□□□□ 0.7
CASC4-204ENST00000557945 TRIM3O75382 744 aaPredicted RBP19.44■□□□□ 0.7
CASC4-204ENST00000557945 ANGPTL1O95841 491 aa19.44■□□□□ 0.7
CASC4-204ENST00000557945 PCGF2P35227 344 aa19.44■□□□□ 0.7
CASC4-204ENST00000557945 CPOXP36551 454 aa19.44■□□□□ 0.7
CASC4-204ENST00000557945 GAS1P54826 345 aa19.44■□□□□ 0.7
CASC4-204ENST00000557945 INPP5JQ15735 1006 aaPredicted RBP19.44■□□□□ 0.7
CASC4-204ENST00000557945 ZNF141Q15928 474 aa19.44■□□□□ 0.7
CASC4-204ENST00000557945 INAQ16352 499 aa19.44■□□□□ 0.7
CASC4-204ENST00000557945 MAPK14Q16539 360 aa19.44■□□□□ 0.7
CASC4-204ENST00000557945 PRAMEF8Q5VWM4 474 aa19.44■□□□□ 0.7
CASC4-204ENST00000557945 PRAMEF7Q5VXH5 474 aa19.44■□□□□ 0.7
CASC4-204ENST00000557945 ERICH5Q6P6B1 374 aa19.44■□□□□ 0.7
CASC4-204ENST00000557945 PEX5LQ8IYB4 626 aa19.44■□□□□ 0.7
CASC4-204ENST00000557945 CISD2Q8N5K1 135 aaKnown RBP19.44■□□□□ 0.7
CASC4-204ENST00000557945 PHOSPHO1Q8TCT1 267 aa19.44■□□□□ 0.7
CASC4-204ENST00000557945 TMEM41AQ96HV5 264 aa19.44■□□□□ 0.7
CASC4-204ENST00000557945 CDRT15Q96T59 188 aa19.44■□□□□ 0.7
CASC4-204ENST00000557945 BCL2L10Q9HD36 194 aa19.44■□□□□ 0.7
CASC4-204ENST00000557945 ZFP64Q9NPA5 681 aa19.44■□□□□ 0.7
CASC4-204ENST00000557945 PPP4R1LQ9P1A2 415 aa19.44■□□□□ 0.7
CASC4-204ENST00000557945 TMEM181Q9P2C4 612 aa19.44■□□□□ 0.7
CASC4-204ENST00000557945 GMPR2Q9P2T1 348 aaKnown RBP19.44■□□□□ 0.7
CASC4-204ENST00000557945 ABCD2Q9UBJ2 740 aa19.44■□□□□ 0.7
CASC4-204ENST00000557945 KCNE5Q9UJ90 142 aa19.44■□□□□ 0.7
CASC4-204ENST00000557945 ANAPC2Q9UJX6 822 aa19.44■□□□□ 0.7
CASC4-204ENST00000557945 NBEAQ8NFP9 2946 aa19.43■□□□□ 0.7
CASC4-204ENST00000557945 NINQ8N4C6 2090 aa19.43■□□□□ 0.7
CASC4-204ENST00000557945 A0A1W2PQD3 144 aa19.43■□□□□ 0.7
CASC4-204ENST00000557945 AGAP5A6NIR3 686 aa19.43■□□□□ 0.7
CASC4-204ENST00000557945 C17orf51A8MQB3 221 aa19.43■□□□□ 0.7
CASC4-204ENST00000557945 EEFSECP57772 596 aaKnown RBP19.43■□□□□ 0.7
CASC4-204ENST00000557945 AP1ARQ63HQ0 302 aa19.43■□□□□ 0.7
CASC4-204ENST00000557945 OR5M10Q6IEU7 315 aa19.43■□□□□ 0.7
CASC4-204ENST00000557945 KRT73Q86Y46 540 aa19.43■□□□□ 0.7
CASC4-204ENST00000557945 SLC30A8Q8IWU4 369 aa19.43■□□□□ 0.7
CASC4-204ENST00000557945 OR1J4Q8NGS1 313 aa19.43■□□□□ 0.7
CASC4-204ENST00000557945 DUSP19Q8WTR2 217 aa19.43■□□□□ 0.7
CASC4-204ENST00000557945 PMM1Q92871 262 aa19.43■□□□□ 0.7
CASC4-204ENST00000557945 FRMD6Q96NE9 622 aa19.43■□□□□ 0.7
CASC4-204ENST00000557945 ALG2Q9H553 416 aa19.43■□□□□ 0.7
CASC4-204ENST00000557945 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.43■□□□□ 0.7
CASC4-204ENST00000557945 SUCOQ9UBS9 1254 aaKnown RBP19.43■□□□□ 0.7
CASC4-204ENST00000557945 PACSIN3Q9UKS6 424 aa19.43■□□□□ 0.7
CASC4-204ENST00000557945 ELOVL7A1L3X0 281 aa19.42■□□□□ 0.7
CASC4-204ENST00000557945 TTLL8A6PVC2 850 aa19.42■□□□□ 0.7
CASC4-204ENST00000557945 FAM166BA8MTA8 275 aa19.42■□□□□ 0.7
CASC4-204ENST00000557945 GTPBP1O00178 669 aaKnown RBP19.42■□□□□ 0.7
CASC4-204ENST00000557945 SNPHO15079 494 aa19.42■□□□□ 0.7
CASC4-204ENST00000557945 SORBS2O94875 1100 aaKnown RBP19.42■□□□□ 0.7
CASC4-204ENST00000557945 DBIP07108 87 aaKnown RBP19.42■□□□□ 0.7
CASC4-204ENST00000557945 IL7RP16871 459 aa19.42■□□□□ 0.7
CASC4-204ENST00000557945 GSK3BP49841 420 aa19.42■□□□□ 0.7
CASC4-204ENST00000557945 C17orf67Q0P5P2 114 aa19.42■□□□□ 0.7
CASC4-204ENST00000557945 FOXO1Q12778 655 aa19.42■□□□□ 0.7
CASC4-204ENST00000557945 BNIP1Q12981 228 aa19.42■□□□□ 0.7
CASC4-204ENST00000557945 CD226Q15762 336 aa19.42■□□□□ 0.7
CASC4-204ENST00000557945 TIGD3Q6B0B8 471 aa19.42■□□□□ 0.7
CASC4-204ENST00000557945 FAM180AQ6UWF9 173 aa19.42■□□□□ 0.7
CASC4-204ENST00000557945 MICU2Q8IYU8 434 aa19.42■□□□□ 0.7
CASC4-204ENST00000557945 RNF148Q8N7C7 305 aa19.42■□□□□ 0.7
CASC4-204ENST00000557945 ZFP62Q8NB50 900 aaPredicted RBP19.42■□□□□ 0.7
CASC4-204ENST00000557945 OR52P1PQ8NH57 321 aa19.42■□□□□ 0.7
CASC4-204ENST00000557945 GNRHR2Q96P88 292 aa19.42■□□□□ 0.7
CASC4-204ENST00000557945 TAAR6Q96RI8 345 aa19.42■□□□□ 0.7
CASC4-204ENST00000557945 ZNF607Q96SK3 696 aa19.42■□□□□ 0.7
CASC4-204ENST00000557945 KCTD14Q9BQ13 255 aaPredicted RBP19.42■□□□□ 0.7
CASC4-204ENST00000557945 TTTY12Q9BZ98 90 aa19.42■□□□□ 0.7
CASC4-204ENST00000557945 TAS2R1Q9NYW7 299 aa19.42■□□□□ 0.7
CASC4-204ENST00000557945 IGSF10Q6WRI0 2623 aa19.42■□□□□ 0.7
CASC4-204ENST00000557945 DSPPQ9NZW4 1301 aa19.42■□□□□ 0.7
CASC4-204ENST00000557945 BOD1L1Q8NFC6 3051 aa19.41■□□□□ 0.7
CASC4-204ENST00000557945 SERINC4A6NH21 518 aa19.41■□□□□ 0.7
CASC4-204ENST00000557945 LRRC3CA6NJW4 275 aa19.41■□□□□ 0.7
CASC4-204ENST00000557945 ACOT7O00154 380 aa19.41■□□□□ 0.7
CASC4-204ENST00000557945 ADAM10O14672 748 aa19.41■□□□□ 0.7
CASC4-204ENST00000557945 GSTA4O15217 222 aa19.41■□□□□ 0.7
CASC4-204ENST00000557945 GMFGO60234 142 aa19.41■□□□□ 0.7
CASC4-204ENST00000557945 DNAJA2O60884 412 aa19.41■□□□□ 0.7
CASC4-204ENST00000557945 ELAVL4P26378 380 aaKnown RBP19.41■□□□□ 0.7
CASC4-204ENST00000557945 PPIAP62937 165 aaKnown RBP19.41■□□□□ 0.7
CASC4-204ENST00000557945 SAMD4BQ5PRF9 694 aaKnown RBP19.41■□□□□ 0.7
CASC4-204ENST00000557945 INTS11Q5TA45 600 aaKnown RBP19.41■□□□□ 0.7
CASC4-204ENST00000557945 BNC2Q6ZN30 1099 aaPredicted RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms