RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 HTR1EP28566 365 aa13.78□□□□□ -0.2
ACTN1-217ENST00000556203 DCTP40126 519 aa13.78□□□□□ -0.2
ACTN1-217ENST00000556203 ZFP36L2P47974 494 aaKnown RBP13.78□□□□□ -0.2
ACTN1-217ENST00000556203 STARP49675 285 aa13.78□□□□□ -0.2
ACTN1-217ENST00000556203 POLR2JP52435 117 aaKnown RBP13.78□□□□□ -0.2
ACTN1-217ENST00000556203 GFRA1P56159 465 aa13.78□□□□□ -0.2
ACTN1-217ENST00000556203 STX1BP61266 288 aa13.78□□□□□ -0.2
ACTN1-217ENST00000556203 ACSF3Q4G176 576 aaPredicted RBP13.78□□□□□ -0.2
ACTN1-217ENST00000556203 FLYWCH1Q4VC44 716 aa13.78□□□□□ -0.2
ACTN1-217ENST00000556203 RAET1LQ5VY80 246 aa13.78□□□□□ -0.2
ACTN1-217ENST00000556203 AAGABQ6PD74 315 aa13.78□□□□□ -0.2
ACTN1-217ENST00000556203 ENPP6Q6UWR7 440 aa13.78□□□□□ -0.2
ACTN1-217ENST00000556203 DNAJC14Q6Y2X3 702 aaPredicted RBP13.78□□□□□ -0.2
ACTN1-217ENST00000556203 ZNF621Q6ZSS3 439 aa13.78□□□□□ -0.2
ACTN1-217ENST00000556203 CCDC71Q8IV32 467 aaPredicted RBP13.78□□□□□ -0.2
ACTN1-217ENST00000556203 TRIML2Q8N7C3 387 aa13.78□□□□□ -0.2
ACTN1-217ENST00000556203 OR10Q1Q8NGQ4 319 aa13.78□□□□□ -0.2
ACTN1-217ENST00000556203 CA5BP1Q8WTZ4 195 aa13.78□□□□□ -0.2
ACTN1-217ENST00000556203 SDF2Q99470 211 aa13.78□□□□□ -0.2
ACTN1-217ENST00000556203 HOXD1Q9GZZ0 328 aa13.78□□□□□ -0.2
ACTN1-217ENST00000556203 RNF6Q9Y252 685 aa13.78□□□□□ -0.2
ACTN1-217ENST00000556203 KLF2Q9Y5W3 355 aaPredicted RBP13.78□□□□□ -0.2
ACTN1-217ENST00000556203 ASH1LQ9NR48 2969 aaKnown RBP13.78□□□□□ -0.2
ACTN1-217ENST00000556203 GTF3C1Q12789 2109 aa13.78□□□□□ -0.2
ACTN1-217ENST00000556203 PTPN13Q12923 2485 aa13.78□□□□□ -0.2
ACTN1-217ENST00000556203 HECTD1Q9ULT8 2610 aa13.77□□□□□ -0.2
ACTN1-217ENST00000556203 A0A1W2PQD3 144 aa13.77□□□□□ -0.21
ACTN1-217ENST00000556203 FAM234BA2RU67 622 aa13.77□□□□□ -0.21
ACTN1-217ENST00000556203 EDF1O60869 148 aaKnown RBP13.77□□□□□ -0.21
ACTN1-217ENST00000556203 DNAJC13O75165 2243 aa13.77□□□□□ -0.21
ACTN1-217ENST00000556203 AK1P00568 194 aa13.77□□□□□ -0.21
ACTN1-217ENST00000556203 C1QCP02747 245 aa13.77□□□□□ -0.21
ACTN1-217ENST00000556203 GRNP28799 593 aaKnown RBP13.77□□□□□ -0.21
ACTN1-217ENST00000556203 KHKP50053 298 aa13.77□□□□□ -0.21
ACTN1-217ENST00000556203 RNF144AP50876 292 aaPredicted RBP13.77□□□□□ -0.21
ACTN1-217ENST00000556203 B3GALT5-AS1P59052 145 aa13.77□□□□□ -0.21
ACTN1-217ENST00000556203 SRYQ05066 204 aa13.77□□□□□ -0.21
ACTN1-217ENST00000556203 CD226Q15762 336 aa13.77□□□□□ -0.21
ACTN1-217ENST00000556203 TIGD2Q4W5G0 525 aa13.77□□□□□ -0.21
ACTN1-217ENST00000556203 HSP90B2PQ58FF3 399 aa13.77□□□□□ -0.21
ACTN1-217ENST00000556203 ATAD3BQ5T9A4 648 aa13.77□□□□□ -0.21
ACTN1-217ENST00000556203 C16orf62Q7Z3J2 963 aa13.77□□□□□ -0.21
ACTN1-217ENST00000556203 RNF130Q86XS8 419 aa13.77□□□□□ -0.21
ACTN1-217ENST00000556203 MISPQ8IVT2 679 aa13.77□□□□□ -0.21
ACTN1-217ENST00000556203 ZNF527Q8NB42 609 aa13.77□□□□□ -0.21
ACTN1-217ENST00000556203 CHDHQ8NE62 594 aaPredicted RBP13.77□□□□□ -0.21
ACTN1-217ENST00000556203 XAGE5Q8WWM1 108 aa13.77□□□□□ -0.21
ACTN1-217ENST00000556203 RAB8BQ92930 207 aa13.77□□□□□ -0.21
ACTN1-217ENST00000556203 RMND5AQ9H871 391 aa13.77□□□□□ -0.21
ACTN1-217ENST00000556203 HHATLQ9HCP6 504 aa13.77□□□□□ -0.21
ACTN1-217ENST00000556203 EXD2Q9NVH0 621 aa13.77□□□□□ -0.21
ACTN1-217ENST00000556203 FLNBO75369 2602 aaKnown RBP13.77□□□□□ -0.21
ACTN1-217ENST00000556203 USP9YO00507 2555 aaPredicted RBP13.77□□□□□ -0.21
ACTN1-217ENST00000556203 A0A0G2JNJ9 132 aa13.76□□□□□ -0.21
ACTN1-217ENST00000556203 KDM4EB2RXH2 506 aaPredicted RBP13.76□□□□□ -0.21
ACTN1-217ENST00000556203 NPIPB9F8W1W9 429 aa13.76□□□□□ -0.21
ACTN1-217ENST00000556203 H0Y3Z8 333 aa13.76□□□□□ -0.21
ACTN1-217ENST00000556203 STX11O75558 287 aa13.76□□□□□ -0.21
ACTN1-217ENST00000556203 AGR2O95994 175 aa13.76□□□□□ -0.21
ACTN1-217ENST00000556203 CPN1P15169 458 aa13.76□□□□□ -0.21
ACTN1-217ENST00000556203 CHMP24386 653 aa13.76□□□□□ -0.21
ACTN1-217ENST00000556203 CHRNB4P30926 498 aa13.76□□□□□ -0.21
ACTN1-217ENST00000556203 ADH7P40394 386 aa13.76□□□□□ -0.21
ACTN1-217ENST00000556203 MRPL19P49406 292 aaKnown RBP13.76□□□□□ -0.21
ACTN1-217ENST00000556203 LHX2P50458 406 aa13.76□□□□□ -0.21
ACTN1-217ENST00000556203 ATP12AP54707 1039 aa13.76□□□□□ -0.21
ACTN1-217ENST00000556203 SF3B4Q15427 424 aaKnown RBP eCLIP13.76□□□□□ -0.21
ACTN1-217ENST00000556203 GPR68Q15743 365 aa13.76□□□□□ -0.21
ACTN1-217ENST00000556203 ZNF630Q2M218 657 aaPredicted RBP13.76□□□□□ -0.21
ACTN1-217ENST00000556203 ARHGAP11BQ3KRB8 267 aa13.76□□□□□ -0.21
ACTN1-217ENST00000556203 KLHL26Q53HC5 615 aa13.76□□□□□ -0.21
ACTN1-217ENST00000556203 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.76□□□□□ -0.21
ACTN1-217ENST00000556203 HEPHL1Q6MZM0 1159 aa13.76□□□□□ -0.21
ACTN1-217ENST00000556203 ARSKQ6UWY0 536 aa13.76□□□□□ -0.21
ACTN1-217ENST00000556203 MSANTD1Q6ZTZ1 278 aa13.76□□□□□ -0.21
ACTN1-217ENST00000556203 SEM1Q6ZVN7 128 aa13.76□□□□□ -0.21
ACTN1-217ENST00000556203 OLIG3Q7RTU3 272 aa13.76□□□□□ -0.21
ACTN1-217ENST00000556203 ARFGAP2Q8N6H7 521 aa13.76□□□□□ -0.21
ACTN1-217ENST00000556203 ZNF614Q8N883 585 aa13.76□□□□□ -0.21
ACTN1-217ENST00000556203 OR5M1Q8NGP8 315 aa13.76□□□□□ -0.21
ACTN1-217ENST00000556203 RFWD2Q8NHY2 731 aa13.76□□□□□ -0.21
ACTN1-217ENST00000556203 PHOSPHO1Q8TCT1 267 aa13.76□□□□□ -0.21
ACTN1-217ENST00000556203 ASB5Q8WWX0 329 aa13.76□□□□□ -0.21
ACTN1-217ENST00000556203 VPS33AQ96AX1 596 aa13.76□□□□□ -0.21
ACTN1-217ENST00000556203 SH3YL1Q96HL8 342 aaPredicted RBP13.76□□□□□ -0.21
ACTN1-217ENST00000556203 ITCHQ96J02 903 aa13.76□□□□□ -0.21
ACTN1-217ENST00000556203 TRIB1Q96RU8 372 aa13.76□□□□□ -0.21
ACTN1-217ENST00000556203 ZNF350Q9GZX5 532 aa13.76□□□□□ -0.21
ACTN1-217ENST00000556203 NPHS2Q9NP85 383 aa13.76□□□□□ -0.21
ACTN1-217ENST00000556203 Q9UFV3 132 aa13.76□□□□□ -0.21
ACTN1-217ENST00000556203 DCTN4Q9UJW0 460 aa13.76□□□□□ -0.21
ACTN1-217ENST00000556203 SPTAN1Q13813 2472 aaKnown RBP13.75□□□□□ -0.21
ACTN1-217ENST00000556203 FAM90A27PA6NNH2 459 aa13.75□□□□□ -0.21
ACTN1-217ENST00000556203 FAM47E-STBD1D6RA91 191 aa13.75□□□□□ -0.21
ACTN1-217ENST00000556203 H3BNH8 94 aa13.75□□□□□ -0.21
ACTN1-217ENST00000556203 HCRTR2O43614 444 aa13.75□□□□□ -0.21
ACTN1-217ENST00000556203 FCMRO60667 390 aa13.75□□□□□ -0.21
ACTN1-217ENST00000556203 ANP32DO95626 131 aa13.75□□□□□ -0.21
ACTN1-217ENST00000556203 EPPINO95925 133 aa13.75□□□□□ -0.21
ACTN1-217ENST00000556203 ZNF708P17019 499 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms