RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 LTB4RQ15722 352 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 ZNF362Q5T0B9 420 aaPredicted RBP6.53□□□□□ -1.36
TDP1-213ENST00000555880 ZNF776Q68DI1 518 aaPredicted RBP6.53□□□□□ -1.36
TDP1-213ENST00000555880 HEPHL1Q6MZM0 1159 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 RPL13AP3Q6NVV1 102 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 ZNF322Q6U7Q0 402 aaPredicted RBP6.53□□□□□ -1.36
TDP1-213ENST00000555880 FRRS1Q6ZNA5 592 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 UTS2BQ765I0 119 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 GET4Q7L5D6 327 aaPredicted RBP6.53□□□□□ -1.36
TDP1-213ENST00000555880 ASPGQ86U10 573 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 NOXA1Q86UR1 476 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 BPHLQ86WA6 291 aaPredicted RBP6.53□□□□□ -1.36
TDP1-213ENST00000555880 AMIGO1Q86WK6 493 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 KLBQ86Z14 1044 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 CPOQ8IVL8 374 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 NKAIN4Q8IVV8 208 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 CDK20Q8IZL9 346 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 ARIH2OSQ8N7S6 290 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 ZNF485Q8NCK3 441 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 OR4K14Q8NGD5 310 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 OR4Q3Q8NH05 313 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 LILRB4Q8NHJ6 448 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 GRPEL2Q8TAA5 225 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 FANK1Q8TC84 345 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 TMEM255BQ8WV15 326 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 CDS1Q92903 461 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 SLC22A18Q96BI1 424 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 ZG16BQ96DA0 208 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 ZC3HAV1LQ96H79 300 aaKnown RBP6.53□□□□□ -1.36
TDP1-213ENST00000555880 ZNF681Q96N22 645 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 ATF6BQ99941 703 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 TTYH2Q9BSA4 534 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 JAM3Q9BX67 310 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 C1QTNF2Q9BXJ5 285 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 SLA2Q9H6Q3 261 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 KIR3DX1Q9H7L2 352 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 TRIM36Q9NQ86 728 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 RBFOX1Q9NWB1 397 aaKnown RBP6.53□□□□□ -1.36
TDP1-213ENST00000555880 SPHK1Q9NYA1 384 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 PTGFRNQ9P2B2 879 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 MALT1Q9UDY8 824 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 APOBEC3BQ9UH17 382 aaKnown RBP6.53□□□□□ -1.36
TDP1-213ENST00000555880 SLC7A7Q9UM01 511 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 C2orf16Q68DN1 1984 aa6.53□□□□□ -1.36
TDP1-213ENST00000555880 KIAA0100Q14667 2235 aaKnown RBP6.53□□□□□ -1.36
TDP1-213ENST00000555880 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 A0A1W2PQU0 124 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 A0A1W2PS29 197 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 TRAPPC13A5PLN9 417 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 FAM86C2PA6NEL3 165 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 URADA6NGE7 173 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 CD8B2A6NJW9 211 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 ARHGEF9O43307 516 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 LYRM1O43325 122 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 KLF4O43474 513 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 B3GALT2O43825 422 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 ORC5O43913 435 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 PIP5K1CO60331 668 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 FCMRO60667 390 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 CA3P07451 260 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 THBS1P07996 1170 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 CD8BP10966 210 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 MYOGP15173 224 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 BMP7P18075 431 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 F8A1P23610 371 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 APEX1P27695 318 aaKnown RBP6.52□□□□□ -1.37
TDP1-213ENST00000555880 CD79BP40259 229 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 KIR2DL3P43628 341 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 RNF144AP50876 292 aaPredicted RBP6.52□□□□□ -1.37
TDP1-213ENST00000555880 MADCAM1Q13477 382 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 CAMK1Q14012 370 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 SF3A2Q15428 464 aaKnown RBP6.52□□□□□ -1.37
TDP1-213ENST00000555880 ARHGAP11BQ3KRB8 267 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 C6orf183Q5T699 404 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 ZNF425Q6IV72 752 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 ZNF836Q6ZNA1 936 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 TRIM48Q8IWZ4 208 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 UBE2J2Q8N2K1 259 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 ACBD7Q8N6N7 88 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 SLC16A11Q8NCK7 471 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 OR7G2Q8NG99 324 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 OR4E2Q8NGC2 313 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 OR51G2Q8NGK0 314 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 OR14C36Q8NHC7 312 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 BRIX1Q8TDN6 353 aaKnown RBP6.52□□□□□ -1.37
TDP1-213ENST00000555880 DNAJA4Q8WW22 397 aaPredicted RBP6.52□□□□□ -1.37
TDP1-213ENST00000555880 SPRYD4Q8WW59 207 aaPredicted RBP6.52□□□□□ -1.37
TDP1-213ENST00000555880 TRIM63Q969Q1 353 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 NACC2Q96BF6 587 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 GIMAP5Q96F15 307 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 SLC35A4Q96G79 324 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 SAMD8Q96LT4 415 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 RIPOR3Q96MK2 946 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 SERINC2Q96SA4 455 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 CD180Q99467 661 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 TMEM246Q9BRR3 403 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 SLC17A9Q9BYT1 436 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 UBQLN3Q9H347 655 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 SRMSQ9H3Y6 488 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 FN3KQ9H479 309 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms