RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 CLCA3PQ9Y6N3 262 aa1.26□□□□□ -2.21
SRP54-207ENST00000555535 RAD54L2Q9Y4B4 1467 aa1.25□□□□□ -2.21
SRP54-207ENST00000555535 IGLV2-18A0A075B6J9 118 aa1.25□□□□□ -2.21
SRP54-207ENST00000555535 C11orf94C9JXX5 98 aa1.25□□□□□ -2.21
SRP54-207ENST00000555535 SLC28A1O00337 649 aa1.25□□□□□ -2.21
SRP54-207ENST00000555535 TM9SF1O15321 606 aa1.25□□□□□ -2.21
SRP54-207ENST00000555535 JCHAINP01591 159 aa1.25□□□□□ -2.21
SRP54-207ENST00000555535 IGKV1D-16P01601 117 aa1.25□□□□□ -2.21
SRP54-207ENST00000555535 APRTP07741 180 aa1.25□□□□□ -2.21
SRP54-207ENST00000555535 ADRB3P13945 408 aa1.25□□□□□ -2.21
SRP54-207ENST00000555535 GCKP35557 465 aa1.25□□□□□ -2.21
SRP54-207ENST00000555535 KIR2DS2P43631 304 aa1.25□□□□□ -2.21
SRP54-207ENST00000555535 NLRP11P59045 1033 aaKnown RBP1.25□□□□□ -2.21
SRP54-207ENST00000555535 FAM83EQ2M2I3 478 aa1.25□□□□□ -2.21
SRP54-207ENST00000555535 ACP7Q6ZNF0 438 aa1.25□□□□□ -2.21
SRP54-207ENST00000555535 HSD11B1LQ7Z5J1 315 aa1.25□□□□□ -2.21
SRP54-207ENST00000555535 PCGF5Q86SE9 256 aa1.25□□□□□ -2.21
SRP54-207ENST00000555535 MLKLQ8NB16 471 aa1.25□□□□□ -2.21
SRP54-207ENST00000555535 DUSP18Q8NEJ0 188 aa1.25□□□□□ -2.21
SRP54-207ENST00000555535 OR9A4Q8NGU2 314 aa1.25□□□□□ -2.21
SRP54-207ENST00000555535 OR2L8Q8NGY9 312 aa1.25□□□□□ -2.21
SRP54-207ENST00000555535 OR1E3Q8WZA6 343 aa1.25□□□□□ -2.21
SRP54-207ENST00000555535 RNF126Q9BV68 326 aa1.25□□□□□ -2.21
SRP54-207ENST00000555535 CHIAQ9BZP6 476 aa1.25□□□□□ -2.21
SRP54-207ENST00000555535 TPK1Q9H3S4 243 aa1.25□□□□□ -2.21
SRP54-207ENST00000555535 SWAP70Q9UH65 585 aa1.25□□□□□ -2.21
SRP54-207ENST00000555535 NRBP1Q9UHY1 535 aa1.25□□□□□ -2.21
SRP54-207ENST00000555535 SAMD4AQ9UPU9 718 aaKnown RBP1.25□□□□□ -2.21
SRP54-207ENST00000555535 WDR45Q9Y484 360 aa1.25□□□□□ -2.21
SRP54-207ENST00000555535 A0A0G2JLM5 398 aa1.24□□□□□ -2.21
SRP54-207ENST00000555535 SMIM28A0A1B0GU29 152 aa1.24□□□□□ -2.21
SRP54-207ENST00000555535 FAM189A1O60320 539 aa1.24□□□□□ -2.21
SRP54-207ENST00000555535 HCN1O60741 890 aa1.24□□□□□ -2.21
SRP54-207ENST00000555535 N4BP1O75113 896 aaKnown RBP1.24□□□□□ -2.21
SRP54-207ENST00000555535 STK17BO94768 372 aa1.24□□□□□ -2.21
SRP54-207ENST00000555535 HSPA4LO95757 839 aa1.24□□□□□ -2.21
SRP54-207ENST00000555535 MRPL3P09001 348 aaKnown RBP1.24□□□□□ -2.21
SRP54-207ENST00000555535 RNASE2P10153 161 aaKnown RBP1.24□□□□□ -2.21
SRP54-207ENST00000555535 DHPSP49366 369 aaPredicted RBP1.24□□□□□ -2.21
SRP54-207ENST00000555535 MTTPP55157 894 aa1.24□□□□□ -2.21
SRP54-207ENST00000555535 VLDLRP98155 873 aa1.24□□□□□ -2.21
SRP54-207ENST00000555535 NSDHLQ15738 373 aa1.24□□□□□ -2.21
SRP54-207ENST00000555535 DEFB116Q30KQ4 102 aa1.24□□□□□ -2.21
SRP54-207ENST00000555535 KRTAP6-3Q3LI67 103 aa1.24□□□□□ -2.21
SRP54-207ENST00000555535 C5orf47Q569G3 176 aa1.24□□□□□ -2.21
SRP54-207ENST00000555535 DNM1P46Q6ZS02 220 aa1.24□□□□□ -2.21
SRP54-207ENST00000555535 BNIPLQ7Z465 357 aa1.24□□□□□ -2.21
SRP54-207ENST00000555535 PRSS42Q7Z5A4 293 aa1.24□□□□□ -2.21
SRP54-207ENST00000555535 HMGN2P46Q86SG4 172 aa1.24□□□□□ -2.21
SRP54-207ENST00000555535 CCDC36Q8IYA8 594 aa1.24□□□□□ -2.21
SRP54-207ENST00000555535 BPIFB2Q8N4F0 458 aa1.24□□□□□ -2.21
SRP54-207ENST00000555535 OR10G2Q8NGC3 310 aa1.24□□□□□ -2.21
SRP54-207ENST00000555535 STARD8Q92502 1023 aa1.24□□□□□ -2.21
SRP54-207ENST00000555535 PIGCQ92535 297 aa1.24□□□□□ -2.21
SRP54-207ENST00000555535 TMEM45BQ96B21 275 aa1.24□□□□□ -2.21
SRP54-207ENST00000555535 OR2M2Q96R28 347 aa1.24□□□□□ -2.21
SRP54-207ENST00000555535 COQ7Q99807 217 aa1.24□□□□□ -2.21
SRP54-207ENST00000555535 SPIN2AQ99865 258 aa1.24□□□□□ -2.21
SRP54-207ENST00000555535 SPIN2BQ9BPZ2 258 aa1.24□□□□□ -2.21
SRP54-207ENST00000555535 PELOQ9BRX2 385 aaKnown RBP1.24□□□□□ -2.21
SRP54-207ENST00000555535 ZDHHC4Q9NPG8 344 aa1.24□□□□□ -2.21
SRP54-207ENST00000555535 ZCCHC3Q9NUD5 404 aaKnown RBP1.24□□□□□ -2.21
SRP54-207ENST00000555535 TERF2IPQ9NYB0 399 aa1.24□□□□□ -2.21
SRP54-207ENST00000555535 C6orf203Q9P0P8 240 aaPredicted RBP1.24□□□□□ -2.21
SRP54-207ENST00000555535 EXOSC1Q9Y3B2 195 aaKnown RBP1.24□□□□□ -2.21
SRP54-207ENST00000555535 NEUROG3Q9Y4Z2 214 aa1.24□□□□□ -2.21
SRP54-207ENST00000555535 USP16Q9Y5T5 823 aa1.24□□□□□ -2.21
SRP54-207ENST00000555535 FKBP7Q9Y680 259 aa1.24□□□□□ -2.21
SRP54-207ENST00000555535 GPR179Q6PRD1 2367 aa1.23□□□□□ -2.21
SRP54-207ENST00000555535 MAP3K15Q6ZN16 1313 aa1.23□□□□□ -2.21
SRP54-207ENST00000555535 A4D1N5 150 aa1.23□□□□□ -2.21
SRP54-207ENST00000555535 ZNF233A6NK53 670 aa1.23□□□□□ -2.21
SRP54-207ENST00000555535 HMGB1P1B2RPK0 211 aaPredicted RBP1.23□□□□□ -2.21
SRP54-207ENST00000555535 RBBP9O75884 186 aa1.23□□□□□ -2.21
SRP54-207ENST00000555535 DCNP07585 359 aaKnown RBP1.23□□□□□ -2.21
SRP54-207ENST00000555535 SCG2P13521 617 aa1.23□□□□□ -2.21
SRP54-207ENST00000555535 DLSTP36957 453 aa1.23□□□□□ -2.21
SRP54-207ENST00000555535 TFPI2P48307 235 aa1.23□□□□□ -2.21
SRP54-207ENST00000555535 ASIC1P78348 528 aa1.23□□□□□ -2.21
SRP54-207ENST00000555535 ARMC3Q5W041 872 aa1.23□□□□□ -2.21
SRP54-207ENST00000555535 AMZ2Q86W34 360 aa1.23□□□□□ -2.21
SRP54-207ENST00000555535 MYOCDQ8IZQ8 938 aa1.23□□□□□ -2.21
SRP54-207ENST00000555535 CENPSQ8N2Z9 138 aa1.23□□□□□ -2.21
SRP54-207ENST00000555535 RNASE8Q8TDE3 154 aaKnown RBP1.23□□□□□ -2.21
SRP54-207ENST00000555535 AENQ8WTP8 325 aaKnown RBP1.23□□□□□ -2.21
SRP54-207ENST00000555535 FAM151AQ8WW52 585 aa1.23□□□□□ -2.21
SRP54-207ENST00000555535 ART4Q93070 314 aa1.23□□□□□ -2.21
SRP54-207ENST00000555535 ERP27Q96DN0 273 aa1.23□□□□□ -2.21
SRP54-207ENST00000555535 CCDC51Q96ER9 411 aa1.23□□□□□ -2.21
SRP54-207ENST00000555535 CEP170P1Q96L14 293 aa1.23□□□□□ -2.21
SRP54-207ENST00000555535 TSNARE1Q96NA8 513 aa1.23□□□□□ -2.21
SRP54-207ENST00000555535 RIOK1Q9BRS2 568 aaKnown RBP1.23□□□□□ -2.21
SRP54-207ENST00000555535 CACNG6Q9BXT2 260 aa1.23□□□□□ -2.21
SRP54-207ENST00000555535 DUS2Q9NX74 493 aaKnown RBP1.23□□□□□ -2.21
SRP54-207ENST00000555535 GDAP2Q9NXN4 497 aa1.23□□□□□ -2.21
SRP54-207ENST00000555535 CNIH4Q9P003 139 aa1.23□□□□□ -2.21
SRP54-207ENST00000555535 RIMS3Q9UJD0 308 aa1.23□□□□□ -2.21
SRP54-207ENST00000555535 ZMYM6O95789 1325 aa1.22□□□□□ -2.21
SRP54-207ENST00000555535 TENM1Q9UKZ4 2725 aa1.22□□□□□ -2.21
SRP54-207ENST00000555535 CACNB4O00305 520 aaPredicted RBP1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms