RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 LCA5Q86VQ0 697 aa4.19□□□□□ -1.74
VRK1-205ENST00000555402 IFNEQ86WN2 208 aa4.19□□□□□ -1.74
VRK1-205ENST00000555402 MCOLN2Q8IZK6 566 aa4.19□□□□□ -1.74
VRK1-205ENST00000555402 BPIFB2Q8N4F0 458 aa4.19□□□□□ -1.74
VRK1-205ENST00000555402 FBXO30Q8TB52 745 aa4.19□□□□□ -1.74
VRK1-205ENST00000555402 NANPQ8TBE9 248 aa4.19□□□□□ -1.74
VRK1-205ENST00000555402 TFB1MQ8WVM0 346 aaKnown RBP4.19□□□□□ -1.74
VRK1-205ENST00000555402 SPRYD4Q8WW59 207 aaPredicted RBP4.19□□□□□ -1.74
VRK1-205ENST00000555402 ATOH8Q96SQ7 321 aa4.19□□□□□ -1.74
VRK1-205ENST00000555402 CRACR2AQ9BSW2 395 aa4.19□□□□□ -1.74
VRK1-205ENST00000555402 HCAR1Q9BXC0 346 aa4.19□□□□□ -1.74
VRK1-205ENST00000555402 POLR1EQ9GZS1 481 aaKnown RBP4.19□□□□□ -1.74
VRK1-205ENST00000555402 RNF14Q9UBS8 474 aa4.19□□□□□ -1.74
VRK1-205ENST00000555402 CYTH4Q9UIA0 394 aa4.19□□□□□ -1.74
VRK1-205ENST00000555402 ANAPC7Q9UJX3 599 aa4.19□□□□□ -1.74
VRK1-205ENST00000555402 GSTK1Q9Y2Q3 226 aa4.19□□□□□ -1.74
VRK1-205ENST00000555402 USP6P35125 1406 aa4.19□□□□□ -1.74
VRK1-205ENST00000555402 METP08581 1390 aa4.18□□□□□ -1.74
VRK1-205ENST00000555402 PCNX3Q9H6A9 2034 aa4.18□□□□□ -1.74
VRK1-205ENST00000555402 SRPX2O60687 465 aaPredicted RBP4.18□□□□□ -1.74
VRK1-205ENST00000555402 RAMP1O60894 148 aa4.18□□□□□ -1.74
VRK1-205ENST00000555402 NEBLO76041 1014 aa4.18□□□□□ -1.74
VRK1-205ENST00000555402 ADCY5O95622 1261 aa4.18□□□□□ -1.74
VRK1-205ENST00000555402 HBQ1P09105 142 aa4.18□□□□□ -1.74
VRK1-205ENST00000555402 H2AFZP0C0S5 128 aa4.18□□□□□ -1.74
VRK1-205ENST00000555402 CDH5P33151 784 aaPredicted RBP4.18□□□□□ -1.74
VRK1-205ENST00000555402 BDKRB1P46663 353 aa4.18□□□□□ -1.74
VRK1-205ENST00000555402 CBX1P83916 185 aa4.18□□□□□ -1.74
VRK1-205ENST00000555402 COX10Q12887 443 aa4.18□□□□□ -1.74
VRK1-205ENST00000555402 CYP51A1Q16850 503 aa4.18□□□□□ -1.74
VRK1-205ENST00000555402 CCDC152Q4G0S7 254 aa4.18□□□□□ -1.74
VRK1-205ENST00000555402 LRRC23Q53EV4 343 aaPredicted RBP4.18□□□□□ -1.74
VRK1-205ENST00000555402 ZNF600Q6ZNG1 722 aa4.18□□□□□ -1.74
VRK1-205ENST00000555402 ACOT1Q86TX2 421 aa4.18□□□□□ -1.74
VRK1-205ENST00000555402 FGFRL1Q8N441 504 aa4.18□□□□□ -1.74
VRK1-205ENST00000555402 M1APQ8TC57 530 aa4.18□□□□□ -1.74
VRK1-205ENST00000555402 VN1R17PQ8TDU5 208 aa4.18□□□□□ -1.74
VRK1-205ENST00000555402 ZSCAN5AQ9BUG6 496 aa4.18□□□□□ -1.74
VRK1-205ENST00000555402 MEAF6Q9HAF1 191 aa4.18□□□□□ -1.74
VRK1-205ENST00000555402 ELOVL3Q9HB03 270 aa4.18□□□□□ -1.74
VRK1-205ENST00000555402 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.18□□□□□ -1.74
VRK1-205ENST00000555402 SLC2A6Q9UGQ3 507 aa4.18□□□□□ -1.74
VRK1-205ENST00000555402 MRPS33Q9Y291 106 aaKnown RBP4.18□□□□□ -1.74
VRK1-205ENST00000555402 WDR45Q9Y484 360 aa4.18□□□□□ -1.74
VRK1-205ENST00000555402 MAD1L1Q9Y6D9 718 aa4.18□□□□□ -1.74
VRK1-205ENST00000555402 ZNF840PA6NDX5 716 aa4.17□□□□□ -1.74
VRK1-205ENST00000555402 OR6C65A6NJZ3 312 aa4.17□□□□□ -1.74
VRK1-205ENST00000555402 ZSCAN12O43309 604 aa4.17□□□□□ -1.74
VRK1-205ENST00000555402 ZNF253O75346 499 aa4.17□□□□□ -1.74
VRK1-205ENST00000555402 OPN1LWP04000 364 aa4.17□□□□□ -1.74
VRK1-205ENST00000555402 UMPSP11172 480 aa4.17□□□□□ -1.74
VRK1-205ENST00000555402 UQCRC2P22695 453 aa4.17□□□□□ -1.74
VRK1-205ENST00000555402 IGFBP5P24593 272 aa4.17□□□□□ -1.74
VRK1-205ENST00000555402 PTBP1P26599 531 aaKnown RBP eCLIP4.17□□□□□ -1.74
VRK1-205ENST00000555402 OR1D4P47884 311 aa4.17□□□□□ -1.74
VRK1-205ENST00000555402 ALDH3B2P48448 385 aa4.17□□□□□ -1.74
VRK1-205ENST00000555402 GBX2P52951 348 aaPredicted RBP4.17□□□□□ -1.74
VRK1-205ENST00000555402 PLA2G16P53816 162 aa4.17□□□□□ -1.74
VRK1-205ENST00000555402 SPIBQ01892 262 aa4.17□□□□□ -1.74
VRK1-205ENST00000555402 HIGD2BQ4VC39 106 aa4.17□□□□□ -1.74
VRK1-205ENST00000555402 TEX44Q53QW1 395 aa4.17□□□□□ -1.74
VRK1-205ENST00000555402 KCNIP4Q6PIL6 250 aa4.17□□□□□ -1.74
VRK1-205ENST00000555402 STAC2Q6ZMT1 411 aa4.17□□□□□ -1.74
VRK1-205ENST00000555402 GTSCR1Q86UQ5 136 aa4.17□□□□□ -1.74
VRK1-205ENST00000555402 VASH2Q86V25 355 aa4.17□□□□□ -1.74
VRK1-205ENST00000555402 APOL2Q9BQE5 337 aa4.17□□□□□ -1.74
VRK1-205ENST00000555402 GORASP2Q9H8Y8 452 aa4.17□□□□□ -1.74
VRK1-205ENST00000555402 ZNF581Q9P0T4 197 aa4.17□□□□□ -1.74
VRK1-205ENST00000555402 GNG12Q9UBI6 72 aa4.17□□□□□ -1.74
VRK1-205ENST00000555402 ATAD2BQ9ULI0 1458 aa4.17□□□□□ -1.74
VRK1-205ENST00000555402 ATP10DQ9P241 1426 aa4.16□□□□□ -1.74
VRK1-205ENST00000555402 C15orf38-AP3S2A0A0A6YYH1 394 aa4.16□□□□□ -1.74
VRK1-205ENST00000555402 CRLF1O75462 422 aa4.16□□□□□ -1.74
VRK1-205ENST00000555402 B3GAT3O94766 335 aa4.16□□□□□ -1.74
VRK1-205ENST00000555402 GJB5O95377 273 aa4.16□□□□□ -1.74
VRK1-205ENST00000555402 IGF1P05019 195 aa4.16□□□□□ -1.74
VRK1-205ENST00000555402 IQCF3P0C7M6 154 aa4.16□□□□□ -1.74
VRK1-205ENST00000555402 CT45A10P0DMU9 189 aa4.16□□□□□ -1.74
VRK1-205ENST00000555402 FOLR2P14207 255 aa4.16□□□□□ -1.74
VRK1-205ENST00000555402 NT5EP21589 574 aa4.16□□□□□ -1.74
VRK1-205ENST00000555402 GLRA2P23416 452 aa4.16□□□□□ -1.74
VRK1-205ENST00000555402 MAGEA9P43362 315 aa4.16□□□□□ -1.74
VRK1-205ENST00000555402 RPL8P62917 257 aaKnown RBP4.16□□□□□ -1.74
VRK1-205ENST00000555402 EWSR1Q01844 656 aaKnown RBP eCLIP4.16□□□□□ -1.74
VRK1-205ENST00000555402 RUNX3Q13761 415 aa4.16□□□□□ -1.74
VRK1-205ENST00000555402 TMEM52BQ4KMG9 183 aa4.16□□□□□ -1.74
VRK1-205ENST00000555402 ATF7IP2Q5U623 682 aa4.16□□□□□ -1.74
VRK1-205ENST00000555402 ZNF57Q68EA5 555 aaPredicted RBP4.16□□□□□ -1.74
VRK1-205ENST00000555402 ACSM5Q6NUN0 579 aa4.16□□□□□ -1.74
VRK1-205ENST00000555402 KDELC1Q6UW63 502 aa4.16□□□□□ -1.74
VRK1-205ENST00000555402 CCBE1Q6UXH8 406 aaPredicted RBP4.16□□□□□ -1.74
VRK1-205ENST00000555402 APTXQ7Z2E3 356 aaKnown RBP4.16□□□□□ -1.74
VRK1-205ENST00000555402 LRRC43Q8N309 656 aa4.16□□□□□ -1.74
VRK1-205ENST00000555402 STXBP6Q8NFX7 210 aa4.16□□□□□ -1.74
VRK1-205ENST00000555402 OR2T33Q8NG76 320 aa4.16□□□□□ -1.74
VRK1-205ENST00000555402 OR52M1Q8NGK5 317 aa4.16□□□□□ -1.74
VRK1-205ENST00000555402 OR2T3Q8NH03 318 aa4.16□□□□□ -1.74
VRK1-205ENST00000555402 TRMT10AQ8TBZ6 339 aaKnown RBP4.16□□□□□ -1.74
VRK1-205ENST00000555402 AGAP11Q8TF27 550 aa4.16□□□□□ -1.74
VRK1-205ENST00000555402 TRUB1Q8WWH5 349 aaKnown RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms