RNA–Protein interactions for RNA: ENST00000555244.1

CPSF2-204, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 3

Gene CPSF2, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-204ENST00000555244 UQCRFS1P47985 274 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 CLK3P49761 638 aaKnown RBP3.82□□□□□ -1.8
CPSF2-204ENST00000555244 SERPINB8P50452 374 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 ZNF84P51523 738 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 LIM2P55344 173 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 OR4D2P58180 307 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 MLF1P58340 268 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 VAMP2P63027 116 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 BTN3A2P78410 334 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 BTG2P78543 158 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 COL10A1Q03692 680 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 EEF1A2Q05639 463 aaKnown RBP3.82□□□□□ -1.8
CPSF2-204ENST00000555244 ZNF33BQ06732 778 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 TGM3Q08188 693 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 CHIT1Q13231 466 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 ALKBH1Q13686 389 aaKnown RBP3.82□□□□□ -1.8
CPSF2-204ENST00000555244 RAPSNQ13702 412 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 SERTAD2Q14140 314 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 RBBP5Q15291 538 aaKnown RBP3.82□□□□□ -1.8
CPSF2-204ENST00000555244 HIST2H2ACQ16777 129 aaPredicted RBP3.82□□□□□ -1.8
CPSF2-204ENST00000555244 ANXA2RQ3ZCQ2 193 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 KRTCAP3Q53RY4 240 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 PRR30Q53SZ7 412 aaPredicted RBP3.82□□□□□ -1.8
CPSF2-204ENST00000555244 SFT2D3Q587I9 215 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 RUNDC3AQ59EK9 446 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 XKR6Q5GH73 641 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 TOR1AIP1Q5JTV8 583 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 UBAP2Q5T6F2 1119 aaKnown RBP3.82□□□□□ -1.8
CPSF2-204ENST00000555244 KHDRBS2Q5VWX1 349 aaKnown RBP3.82□□□□□ -1.8
CPSF2-204ENST00000555244 HIST2H2AA3Q6FI13 130 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 MED27Q6P2C8 311 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 TRIM40Q6P9F5 258 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 ZNF793Q6ZN11 406 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 Q6ZPB1 254 aaPredicted RBP3.82□□□□□ -1.8
CPSF2-204ENST00000555244 LINC00696Q6ZRV3 163 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 SH2D5Q6ZV89 423 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 RAPH1Q70E73 1250 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.82□□□□□ -1.8
CPSF2-204ENST00000555244 CCDC25Q86WR0 208 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 RPS19BP1Q86WX3 136 aaKnown RBP3.82□□□□□ -1.8
CPSF2-204ENST00000555244 TDRPQ86YL5 185 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 CRLF3Q8IUI8 442 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 SIAH3Q8IW03 269 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 GPALPP1Q8IXQ4 340 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 IFT20Q8IY31 132 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 SLC5A8Q8N695 610 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 HORMAD2Q8N7B1 307 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 ACOT4Q8N9L9 421 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 MORN4Q8NDC4 146 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 CATSPER1Q8NEC5 780 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 B3GNT7Q8NFL0 401 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 SEMA6DQ8NFY4 1073 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 C16orf52Q8NHV5 167 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 ZCCHC10Q8TBK6 192 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 ACMSDQ8TDX5 336 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 GRHL3Q8TE85 626 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 TRPC4APQ8TEL6 797 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 SSC4DQ8WTU2 575 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 PTPMT1Q8WUK0 201 aaPredicted RBP3.82□□□□□ -1.8
CPSF2-204ENST00000555244 KCTD4Q8WVF5 259 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 TSLPQ969D9 159 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 ESAMQ96AP7 390 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 NTNG2Q96CW9 530 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 ZG16BQ96DA0 208 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 MTBPQ96DY7 904 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 CMTM7Q96FZ5 175 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 PAFAH2Q99487 392 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 MRPL57Q9BQC6 102 aaKnown RBP3.82□□□□□ -1.8
CPSF2-204ENST00000555244 ADAP2Q9NPF8 381 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 MS4A12Q9NXJ0 267 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 WWOXQ9NZC7 414 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 CD274Q9NZQ7 290 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 PTGFRNQ9P2B2 879 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 OPTCQ9UBM4 332 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 ZNF223Q9UK11 482 aaPredicted RBP3.82□□□□□ -1.8
CPSF2-204ENST00000555244 MRPS33Q9Y291 106 aaKnown RBP3.82□□□□□ -1.8
CPSF2-204ENST00000555244 ZNF835Q9Y2P0 537 aa3.82□□□□□ -1.8
CPSF2-204ENST00000555244 MYO9AB2RTY4 2548 aa3.81□□□□□ -1.8
CPSF2-204ENST00000555244 PCNX1Q96RV3 2341 aa3.81□□□□□ -1.8
CPSF2-204ENST00000555244 A0A0A6YYD5 115 aa3.81□□□□□ -1.8
CPSF2-204ENST00000555244 IGHV3-20A0A0C4DH32 117 aa3.81□□□□□ -1.8
CPSF2-204ENST00000555244 A0A1B0GUH1 482 aa3.81□□□□□ -1.8
CPSF2-204ENST00000555244 ZNF860A6NHJ4 632 aa3.81□□□□□ -1.8
CPSF2-204ENST00000555244 NCF1BA6NI72 391 aaPredicted RBP3.81□□□□□ -1.8
CPSF2-204ENST00000555244 LINC01548A6NM66 108 aa3.81□□□□□ -1.8
CPSF2-204ENST00000555244 GABRR3A8MPY1 467 aa3.81□□□□□ -1.8
CPSF2-204ENST00000555244 NCF1CA8MVU1 366 aaPredicted RBP3.81□□□□□ -1.8
CPSF2-204ENST00000555244 H3BQF6 201 aa3.81□□□□□ -1.8
CPSF2-204ENST00000555244 PSMD12O00232 456 aaPredicted RBP3.81□□□□□ -1.8
CPSF2-204ENST00000555244 PLPP1O14494 284 aa3.81□□□□□ -1.8
CPSF2-204ENST00000555244 OR7A17O14581 309 aa3.81□□□□□ -1.8
CPSF2-204ENST00000555244 RIPK2O43353 540 aa3.81□□□□□ -1.8
CPSF2-204ENST00000555244 ERI3O43414 337 aaKnown RBP3.81□□□□□ -1.8
CPSF2-204ENST00000555244 B4GALT2O60909 372 aa3.81□□□□□ -1.8
CPSF2-204ENST00000555244 ZFAND5O76080 213 aa3.81□□□□□ -1.8
CPSF2-204ENST00000555244 CLDN9O95484 217 aa3.81□□□□□ -1.8
CPSF2-204ENST00000555244 IGKV3-11P04433 115 aa3.81□□□□□ -1.8
CPSF2-204ENST00000555244 SP1P08047 785 aa3.81□□□□□ -1.8
CPSF2-204ENST00000555244 GSTA1P08263 222 aa3.81□□□□□ -1.8
CPSF2-204ENST00000555244 INHBAP08476 426 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms