RNA–Protein interactions for RNA: ENST00000552491.5

LIMA1-212, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 2,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-212ENST00000552491 OR52N1Q8NH53 320 aa5.06□□□□□ -1.6
LIMA1-212ENST00000552491 CD99L2Q8TCZ2 262 aa5.06□□□□□ -1.6
LIMA1-212ENST00000552491 TMEM255BQ8WV15 326 aa5.06□□□□□ -1.6
LIMA1-212ENST00000552491 RFT1Q96AA3 541 aa5.06□□□□□ -1.6
LIMA1-212ENST00000552491 RGMAQ96B86 450 aa5.06□□□□□ -1.6
LIMA1-212ENST00000552491 PHF21AQ96BD5 680 aa5.06□□□□□ -1.6
LIMA1-212ENST00000552491 ARMC5Q96C12 935 aa5.06□□□□□ -1.6
LIMA1-212ENST00000552491 NUS1Q96E22 293 aa5.06□□□□□ -1.6
LIMA1-212ENST00000552491 ARSGQ96EG1 525 aa5.06□□□□□ -1.6
LIMA1-212ENST00000552491 CCDC120Q96HB5 630 aa5.06□□□□□ -1.6
LIMA1-212ENST00000552491 SAMD8Q96LT4 415 aa5.06□□□□□ -1.6
LIMA1-212ENST00000552491 ZSWIM3Q96MP5 696 aa5.06□□□□□ -1.6
LIMA1-212ENST00000552491 CAMK1GQ96NX5 476 aa5.06□□□□□ -1.6
LIMA1-212ENST00000552491 FCRL4Q96PJ5 515 aa5.06□□□□□ -1.6
LIMA1-212ENST00000552491 ARHGDIGQ99819 225 aa5.06□□□□□ -1.6
LIMA1-212ENST00000552491 TRMT61BQ9BVS5 477 aaKnown RBP5.06□□□□□ -1.6
LIMA1-212ENST00000552491 PINK1Q9BXM7 581 aa5.06□□□□□ -1.6
LIMA1-212ENST00000552491 ZCCHC2Q9C0B9 1178 aaKnown RBP5.06□□□□□ -1.6
LIMA1-212ENST00000552491 BTBD1Q9H0C5 482 aa5.06□□□□□ -1.6
LIMA1-212ENST00000552491 PIGUQ9H490 435 aa5.06□□□□□ -1.6
LIMA1-212ENST00000552491 OSGEPL1Q9H4B0 414 aa5.06□□□□□ -1.6
LIMA1-212ENST00000552491 COQ3Q9NZJ6 369 aa5.06□□□□□ -1.6
LIMA1-212ENST00000552491 PTGFRNQ9P2B2 879 aa5.06□□□□□ -1.6
LIMA1-212ENST00000552491 ING4Q9UNL4 249 aa5.06□□□□□ -1.6
LIMA1-212ENST00000552491 ATG4BQ9Y4P1 393 aa5.06□□□□□ -1.6
LIMA1-212ENST00000552491 IRAK3Q9Y616 596 aa5.06□□□□□ -1.6
LIMA1-212ENST00000552491 U3KQ87 197 aa5.06□□□□□ -1.6
LIMA1-212ENST00000552491 RPS10-NUDT3A0A1W2PQS6 291 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 LINC00862A6NCI5 91 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 LRIT2A6NDA9 550 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 MPC2O95563 127 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 FGBP02675 491 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 CD3GP09693 182 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 AHCYP23526 432 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 SSR2P43308 183 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 KHKP50053 298 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 CCR8P51685 355 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 EPHA5P54756 1037 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 CSNK1G2P78368 415 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 NTHL1P78549 312 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 SP3Q02447 781 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 GNA13Q14344 377 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 POU4F3Q15319 338 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 NTRK2Q16620 822 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 ARHGAP15Q53QZ3 475 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 TCEAL5Q5H9L2 206 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 HBMQ6B0K9 141 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 MTFR2Q6P444 385 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 PLBD1Q6P4A8 553 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 RPTNQ6XPR3 784 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 ESPNLQ6ZVH7 1005 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 GDF7Q7Z4P5 450 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 OAFQ86UD1 273 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 DCUN1D3Q8IWE4 304 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 C17orf47Q8NEP4 570 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 OR6C4Q8NGE1 309 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 OR4D9Q8NGE8 314 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 OR13C5Q8NGS8 318 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 OR8K5Q8NH50 307 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 ZNF431Q8TF32 576 aaPredicted RBP5.05□□□□□ -1.6
LIMA1-212ENST00000552491 NR4A3Q92570 626 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 NACC2Q96BF6 587 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 LRIG1Q96JA1 1093 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 ZNF514Q96K75 400 aaPredicted RBP5.05□□□□□ -1.6
LIMA1-212ENST00000552491 LRRC3BQ96PB8 259 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 OR7D2Q96RA2 312 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 LGR4Q9BXB1 951 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 XKR8Q9H6D3 395 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 RANBP3Q9H6Z4 567 aaPredicted RBP5.05□□□□□ -1.6
LIMA1-212ENST00000552491 ERVMER34-1Q9H9K5 563 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 PELI2Q9HAT8 420 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 ZDHHC4Q9NPG8 344 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 MED17Q9NVC6 651 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 EVA1BQ9NVM1 165 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 GLTPQ9NZD2 209 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 MARK1Q9P0L2 795 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 TNFRSF10DQ9UBN6 386 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 ZNF222Q9UK12 451 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 ZMIZ1Q9ULJ6 1067 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 CLEC4AQ9UMR7 237 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 AUP1Q9Y679 476 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 CACNG2Q9Y698 323 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 TP53BP1Q12888 1972 aaPredicted RBP5.05□□□□□ -1.6
LIMA1-212ENST00000552491 A0A0G2JPF8 293 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 SLC9B1P1A6NJY1 282 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 HNRNPCL2B2RXH8 293 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 HNRNPCL3B7ZW38 293 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 G3V3Q6 166 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 LATO43561 262 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 HYAL3O43820 417 aaPredicted RBP5.05□□□□□ -1.6
LIMA1-212ENST00000552491 REM1O75628 298 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 RGS9O75916 674 aaPredicted RBP5.05□□□□□ -1.6
LIMA1-212ENST00000552491 NFATC1O95644 943 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 DHFRP00374 187 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 CFDP00746 253 aaPredicted RBP5.05□□□□□ -1.6
LIMA1-212ENST00000552491 RAF1P04049 648 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 ANKRD34CP0C6C1 535 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 HNRNPCL4P0DMR1 293 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 IL9P15248 144 aa5.05□□□□□ -1.6
LIMA1-212ENST00000552491 FPR3P25089 353 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms