RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 SCO2O43819 266 aa13.17□□□□□ -0.3
DDX54-203ENST00000546869 KIAA0513O60268 411 aa13.17□□□□□ -0.3
DDX54-203ENST00000546869 SLC19A2O60779 497 aa13.17□□□□□ -0.3
DDX54-203ENST00000546869 TNFRSF21O75509 655 aa13.17□□□□□ -0.3
DDX54-203ENST00000546869 UGT2B17O75795 530 aa13.17□□□□□ -0.3
DDX54-203ENST00000546869 PTGS2P35354 604 aa13.17□□□□□ -0.3
DDX54-203ENST00000546869 CRATP43155 626 aa13.17□□□□□ -0.3
DDX54-203ENST00000546869 DSTNP60981 165 aa13.17□□□□□ -0.3
DDX54-203ENST00000546869 SF3A3Q12874 501 aaKnown RBP eCLIP13.17□□□□□ -0.3
DDX54-203ENST00000546869 CYLC2Q14093 348 aaPredicted RBP13.17□□□□□ -0.3
DDX54-203ENST00000546869 MAPK11Q15759 364 aa13.17□□□□□ -0.3
DDX54-203ENST00000546869 PRAMEF8Q5VWM4 474 aa13.17□□□□□ -0.3
DDX54-203ENST00000546869 PRAMEF7Q5VXH5 474 aa13.17□□□□□ -0.3
DDX54-203ENST00000546869 FRRS1Q6ZNA5 592 aa13.17□□□□□ -0.3
DDX54-203ENST00000546869 ANKS4BQ8N8V4 417 aa13.17□□□□□ -0.3
DDX54-203ENST00000546869 OR2M3Q8NG83 312 aa13.17□□□□□ -0.3
DDX54-203ENST00000546869 FAM57AQ8TBR7 257 aa13.17□□□□□ -0.3
DDX54-203ENST00000546869 PNPT1Q8TCS8 783 aaKnown RBP13.17□□□□□ -0.3
DDX54-203ENST00000546869 SARAFQ96BY9 339 aa13.17□□□□□ -0.3
DDX54-203ENST00000546869 AURKBQ96GD4 344 aaPredicted RBP13.17□□□□□ -0.3
DDX54-203ENST00000546869 ANKRD27Q96NW4 1050 aa13.17□□□□□ -0.3
DDX54-203ENST00000546869 CGREF1Q99674 301 aa13.17□□□□□ -0.3
DDX54-203ENST00000546869 CCDC106Q9BWC9 280 aa13.17□□□□□ -0.3
DDX54-203ENST00000546869 P2RX2Q9UBL9 471 aa13.17□□□□□ -0.3
DDX54-203ENST00000546869 SUCOQ9UBS9 1254 aaKnown RBP13.17□□□□□ -0.3
DDX54-203ENST00000546869 KCNE5Q9UJ90 142 aa13.17□□□□□ -0.3
DDX54-203ENST00000546869 FBXL2Q9UKC9 423 aa13.17□□□□□ -0.3
DDX54-203ENST00000546869 ADAM21Q9UKJ8 722 aa13.17□□□□□ -0.3
DDX54-203ENST00000546869 PRDM4Q9UKN5 801 aa13.17□□□□□ -0.3
DDX54-203ENST00000546869 MKLN1Q9UL63 735 aa13.17□□□□□ -0.3
DDX54-203ENST00000546869 WDR45Q9Y484 360 aa13.17□□□□□ -0.3
DDX54-203ENST00000546869 NBASA2RRP1 2371 aa13.17□□□□□ -0.3
DDX54-203ENST00000546869 UBR5O95071 2799 aaPredicted RBP13.16□□□□□ -0.3
DDX54-203ENST00000546869 EML6Q6ZMW3 1958 aa13.16□□□□□ -0.3
DDX54-203ENST00000546869 HELZ2Q9BYK8 2649 aaKnown RBP13.16□□□□□ -0.3
DDX54-203ENST00000546869 A0A1B0GUH1 482 aa13.16□□□□□ -0.3
DDX54-203ENST00000546869 EVPLLA8MZ36 301 aa13.16□□□□□ -0.3
DDX54-203ENST00000546869 LINC01387J3KSC0 135 aa13.16□□□□□ -0.3
DDX54-203ENST00000546869 ZIC3O60481 467 aa13.16□□□□□ -0.3
DDX54-203ENST00000546869 CDC40O60508 579 aaKnown RBP eCLIP13.16□□□□□ -0.3
DDX54-203ENST00000546869 EIF4E2O60573 245 aaKnown RBP13.16□□□□□ -0.3
DDX54-203ENST00000546869 SHOX2O60902 331 aaPredicted RBP13.16□□□□□ -0.3
DDX54-203ENST00000546869 TRAPPC6AO75865 159 aa13.16□□□□□ -0.3
DDX54-203ENST00000546869 PDE9AO76083 593 aa13.16□□□□□ -0.3
DDX54-203ENST00000546869 ZIC2O95409 532 aaPredicted RBP13.16□□□□□ -0.3
DDX54-203ENST00000546869 H6PDO95479 791 aa13.16□□□□□ -0.3
DDX54-203ENST00000546869 ETFAP13804 333 aa13.16□□□□□ -0.3
DDX54-203ENST00000546869 HPCAP84074 193 aa13.16□□□□□ -0.3
DDX54-203ENST00000546869 HSF1Q00613 529 aa13.16□□□□□ -0.3
DDX54-203ENST00000546869 GPR68Q15743 365 aa13.16□□□□□ -0.3
DDX54-203ENST00000546869 SYPL1Q16563 259 aa13.16□□□□□ -0.3
DDX54-203ENST00000546869 ZNF630Q2M218 657 aaPredicted RBP13.16□□□□□ -0.3
DDX54-203ENST00000546869 GPAT3Q53EU6 434 aa13.16□□□□□ -0.3
DDX54-203ENST00000546869 C4orf17Q53FE4 359 aa13.16□□□□□ -0.3
DDX54-203ENST00000546869 DHDDSQ86SQ9 333 aa13.16□□□□□ -0.3
DDX54-203ENST00000546869 MTDHQ86UE4 582 aaKnown RBP13.16□□□□□ -0.3
DDX54-203ENST00000546869 ZNF619Q8N2I2 560 aa13.16□□□□□ -0.3
DDX54-203ENST00000546869 ANKFN1Q8N957 763 aa13.16□□□□□ -0.3
DDX54-203ENST00000546869 FAM83FQ8NEG4 500 aaPredicted RBP13.16□□□□□ -0.3
DDX54-203ENST00000546869 OR4K17Q8NGC6 315 aa13.16□□□□□ -0.3
DDX54-203ENST00000546869 PRR7Q8TB68 274 aa13.16□□□□□ -0.3
DDX54-203ENST00000546869 SLC38A5Q8WUX1 472 aa13.16□□□□□ -0.3
DDX54-203ENST00000546869 FAM107BQ9H098 131 aa13.16□□□□□ -0.3
DDX54-203ENST00000546869 SLC38A1Q9H2H9 487 aa13.16□□□□□ -0.3
DDX54-203ENST00000546869 DSN1Q9H410 356 aa13.16□□□□□ -0.3
DDX54-203ENST00000546869 LDAHQ9H6V9 325 aa13.16□□□□□ -0.3
DDX54-203ENST00000546869 BCL2L10Q9HD36 194 aa13.16□□□□□ -0.3
DDX54-203ENST00000546869 A4GALTQ9NPC4 353 aa13.16□□□□□ -0.3
DDX54-203ENST00000546869 MED11Q9P086 117 aa13.16□□□□□ -0.3
DDX54-203ENST00000546869 OSGIN2Q9Y236 505 aa13.16□□□□□ -0.3
DDX54-203ENST00000546869 HRH3Q9Y5N1 445 aa13.16□□□□□ -0.3
DDX54-203ENST00000546869 LIPGQ9Y5X9 500 aa13.16□□□□□ -0.3
DDX54-203ENST00000546869 DSPPQ9NZW4 1301 aa13.15□□□□□ -0.3
DDX54-203ENST00000546869 RP1L1Q8IWN7 2480 aaPredicted RBP13.15□□□□□ -0.3
DDX54-203ENST00000546869 A0A087WZY1 265 aa13.15□□□□□ -0.3
DDX54-203ENST00000546869 A0A0G2JPF8 293 aa13.15□□□□□ -0.3
DDX54-203ENST00000546869 TMEM247A6NEH6 219 aa13.15□□□□□ -0.3
DDX54-203ENST00000546869 SERINC4A6NH21 518 aa13.15□□□□□ -0.3
DDX54-203ENST00000546869 AGAP5A6NIR3 686 aa13.15□□□□□ -0.3
DDX54-203ENST00000546869 HNRNPCL2B2RXH8 293 aa13.15□□□□□ -0.3
DDX54-203ENST00000546869 HNRNPCL3B7ZW38 293 aa13.15□□□□□ -0.3
DDX54-203ENST00000546869 PRRG2O14669 202 aa13.15□□□□□ -0.3
DDX54-203ENST00000546869 HNRNPCL1O60812 293 aaKnown RBP13.15□□□□□ -0.3
DDX54-203ENST00000546869 DNAJA2O60884 412 aa13.15□□□□□ -0.3
DDX54-203ENST00000546869 ACTL6AO96019 429 aa13.15□□□□□ -0.3
DDX54-203ENST00000546869 HNRNPCL4P0DMR1 293 aa13.15□□□□□ -0.3
DDX54-203ENST00000546869 NR2F1P10589 423 aa13.15□□□□□ -0.3
DDX54-203ENST00000546869 ABOP16442 354 aa13.15□□□□□ -0.3
DDX54-203ENST00000546869 CHMP24386 653 aa13.15□□□□□ -0.3
DDX54-203ENST00000546869 DPP4P27487 766 aa13.15□□□□□ -0.3
DDX54-203ENST00000546869 CA7P43166 264 aa13.15□□□□□ -0.3
DDX54-203ENST00000546869 CRISP3P54108 245 aa13.15□□□□□ -0.3
DDX54-203ENST00000546869 CASP6P55212 293 aa13.15□□□□□ -0.3
DDX54-203ENST00000546869 SUMO3P55854 103 aaPredicted RBP13.15□□□□□ -0.3
DDX54-203ENST00000546869 GFRA1P56159 465 aa13.15□□□□□ -0.3
DDX54-203ENST00000546869 CHRNEQ04844 493 aa13.15□□□□□ -0.3
DDX54-203ENST00000546869 NFYCQ13952 458 aa13.15□□□□□ -0.3
DDX54-203ENST00000546869 CD226Q15762 336 aa13.15□□□□□ -0.3
DDX54-203ENST00000546869 TRMT5Q32P41 509 aaKnown RBP13.15□□□□□ -0.3
DDX54-203ENST00000546869 VASNQ6EMK4 673 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms