RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 ARPC2O15144 300 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 PQBP1O60828 265 aaKnown RBP5.44□□□□□ -1.54
XRCC4-206ENST00000542685 LYPLA1O75608 230 aaPredicted RBP5.44□□□□□ -1.54
XRCC4-206ENST00000542685 DDNO94850 711 aaPredicted RBP5.44□□□□□ -1.54
XRCC4-206ENST00000542685 NSA2O95478 260 aaKnown RBP5.44□□□□□ -1.54
XRCC4-206ENST00000542685 RAB3DO95716 219 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 NDUFB10O96000 172 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 TOMM40O96008 361 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 MT-CYBP00156 380 aaPredicted RBP5.44□□□□□ -1.54
XRCC4-206ENST00000542685 C9P02748 559 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 CBSLP0DN79 551 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 MLNP12872 115 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 PEPDP12955 493 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 RNH1P13489 461 aaKnown RBP5.44□□□□□ -1.54
XRCC4-206ENST00000542685 ARSBP15848 533 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 IL7RP16871 459 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 CD58P19256 250 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 CYP2B6P20813 491 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 STOMP27105 288 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 HTR1EP28566 365 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 MAT2AP31153 395 aaKnown RBP5.44□□□□□ -1.54
XRCC4-206ENST00000542685 CBSP35520 551 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 PMELP40967 661 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 CRATP43155 626 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 KIR3DL2P43630 455 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 HTR6P50406 440 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 SNRPD2P62316 118 aaKnown RBP5.44□□□□□ -1.54
XRCC4-206ENST00000542685 B4GALNT1Q00973 533 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 GAGE1Q13065 139 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 RPA4Q13156 261 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 GPR17Q13304 367 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 PEX6Q13608 980 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 DDX39BQ13838 428 aaKnown RBP5.44□□□□□ -1.54
XRCC4-206ENST00000542685 GRB7Q14451 532 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 SF3A2Q15428 464 aaKnown RBP5.44□□□□□ -1.54
XRCC4-206ENST00000542685 SYT16Q17RD7 645 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 INO80DQ53TQ3 878 aaPredicted RBP5.44□□□□□ -1.54
XRCC4-206ENST00000542685 OR2B11Q5JQS5 317 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 GLRA4Q5JXX5 417 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 CELF3Q5SZQ8 465 aaKnown RBP5.44□□□□□ -1.54
XRCC4-206ENST00000542685 GPRC6AQ5T6X5 926 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 RIPPLY2Q5TAB7 128 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 LIPMQ5VYY2 423 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 STEAP4Q687X5 459 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 GLYATQ6IB77 296 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 CAPN13Q6MZZ7 669 aaPredicted RBP5.44□□□□□ -1.54
XRCC4-206ENST00000542685 ZNF852Q6ZMS4 543 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 C9orf47Q6ZRZ4 202 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 ZCCHC23Q6ZST2 131 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 PTAR1Q7Z6K3 402 aaPredicted RBP5.44□□□□□ -1.54
XRCC4-206ENST00000542685 MRPL52Q86TS9 123 aaKnown RBP5.44□□□□□ -1.54
XRCC4-206ENST00000542685 ISCA2Q86U28 154 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 TRIM69Q86WT6 500 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 METTL23Q86XA0 190 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 CBWD2Q8IUF1 395 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 SVBPQ8N300 66 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 ARL14Q8N4G2 192 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 MS4A15Q8N5U1 240 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 TRAM1L1Q8N609 369 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 MCPH1Q8NEM0 835 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 OR52E4Q8NGH9 312 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 OR8D4Q8NGM9 314 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 OR13C3Q8NGS6 347 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 OR2T11Q8NH01 316 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 ACTL9Q8TC94 416 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 SPPL3Q8TCT6 385 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 CHURC1Q8WUH1 139 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 ADAMTS14Q8WXS8 1223 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 NR4A3Q92570 626 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 KAT2AQ92830 837 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 MARK4Q96L34 752 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 ZNF558Q96NG5 402 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 OR2M2Q96R28 347 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 RAD9AQ99638 391 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 ZNF559Q9BR84 538 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 C11orf70Q9BRQ4 267 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 DPH7Q9BTV6 452 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.44□□□□□ -1.54
XRCC4-206ENST00000542685 GABARAPL1Q9H0R8 117 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 PCDHAC1Q9H158 963 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 SEMA4BQ9NPR2 832 aaPredicted RBP5.44□□□□□ -1.54
XRCC4-206ENST00000542685 GLRX2Q9NS18 164 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 MPP6Q9NZW5 540 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 POLLQ9UGP5 575 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 POLR3HQ9Y535 204 aaPredicted RBP5.44□□□□□ -1.54
XRCC4-206ENST00000542685 UBIAD1Q9Y5Z9 338 aa5.44□□□□□ -1.54
XRCC4-206ENST00000542685 MTCL1Q9Y4B5 1905 aaKnown RBP5.44□□□□□ -1.54
XRCC4-206ENST00000542685 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.43□□□□□ -1.54
XRCC4-206ENST00000542685 A0A0B4J293 547 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 IGLV5-39A0A0G2JS06 123 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 LOC100130705A0A1B0GUX0 176 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 C5orf52A6NGY3 159 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 ZNF879B4DU55 563 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 D6RAR5 112 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 PTGES3LE9PB15 166 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 BLOC1S5-TXNDC5H3BN57 136 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 I6L893 689 aaPredicted RBP5.43□□□□□ -1.54
XRCC4-206ENST00000542685 PDCD5O14737 125 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 BCKDKO14874 412 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 ANKRD28O15084 1053 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms