RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 SYT14Q8NB59 555 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 OR8J1Q8NGP2 316 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 OR52P1PQ8NH57 321 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 NANPQ8TBE9 248 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 TSACCQ96A04 125 aaPredicted RBP4.92□□□□□ -1.62
PROM1-220ENST00000540805 SLC25A36Q96CQ1 311 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 TCEAL4Q96EI5 215 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 WDR89Q96FK6 387 aaPredicted RBP4.92□□□□□ -1.62
PROM1-220ENST00000540805 DMRTA2Q96SC8 542 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 CLEC4MQ9H2X3 399 aaPredicted RBP4.92□□□□□ -1.62
PROM1-220ENST00000540805 PPP1R3EQ9H7J1 279 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 SLC22A11Q9NSA0 550 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 VPS29Q9UBQ0 182 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 ZNF222Q9UK12 451 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 EDDM13A0A1B0GTR0 161 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 RPS10-NUDT3A0A1W2PQS6 291 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 TRBC2A0A5B9 178 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 FAM227AF5H4B4 570 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 H7BY64 318 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 PTP4A3O75365 173 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 IFNA7P01567 189 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 NR2F6P10588 404 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 STOMP27105 288 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 AOAHP28039 575 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 CCKBRP32239 447 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 BDKRB1P46663 353 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 RNF144AP50876 292 aaPredicted RBP4.91□□□□□ -1.62
PROM1-220ENST00000540805 XKP51811 444 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 TAS2R50P59544 299 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 COX20Q5RI15 118 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 C12orf73Q69YU5 71 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 KIAA1211LQ6NV74 962 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 NCEH1Q6PIU2 408 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 TMIGD1Q6UXZ0 262 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 QSOX2Q6ZRP7 698 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 FAM98AQ8NCA5 519 aaKnown RBP4.91□□□□□ -1.62
PROM1-220ENST00000540805 OR10H5Q8NGA6 315 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 OR52N2Q8NGI0 321 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 OR5AK3PQ8NH89 298 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 UFD1Q92890 307 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 MR1Q95460 341 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 SLC6A18Q96N87 628 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 PRAP1Q96NZ9 151 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 NDC1Q9BTX1 674 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 HDHD2Q9H0R4 259 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 SLC6A17Q9H1V8 727 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 NT5DC2Q9H857 520 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 SFXN1Q9H9B4 322 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 EMC7Q9NPA0 242 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 PTTG3PQ9NZH4 202 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 COPS7AQ9UBW8 275 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 CLEC4AQ9UMR7 237 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 ASB4Q9Y574 426 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 OR1A2Q9Y585 309 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 CDH10Q9Y6N8 788 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 MUC22E2RYF6 1773 aaPredicted RBP4.91□□□□□ -1.62
PROM1-220ENST00000540805 DSPPQ9NZW4 1301 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 A0A1W2PRG6 482 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 GABRR3A8MPY1 467 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 MID1O15344 667 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 NDUFS4O43181 175 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 CHP2O43745 196 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 PRAMEF12O95522 483 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 DHFRP00374 187 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 DBIP07108 87 aaKnown RBP4.91□□□□□ -1.62
PROM1-220ENST00000540805 ANXA3P12429 323 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 HOXB3P14651 431 aaPredicted RBP4.91□□□□□ -1.62
PROM1-220ENST00000540805 SLC6A12P48065 614 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 WNT4P56705 351 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 SRP54P61011 504 aaKnown RBP4.91□□□□□ -1.62
PROM1-220ENST00000540805 WDR5P61964 334 aaKnown RBP4.91□□□□□ -1.62
PROM1-220ENST00000540805 CDK6Q00534 326 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 ILKQ13418 452 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 ADAM15Q13444 863 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 MELKQ14680 651 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 C11orf88Q6PI97 169 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 ZNF852Q6ZMS4 543 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 BCDIN3DQ7Z5W3 292 aaKnown RBP4.91□□□□□ -1.62
PROM1-220ENST00000540805 CCDC36Q8IYA8 594 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 OXR1Q8N573 874 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 COX18Q8N8Q8 333 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 GOT1L1Q8NHS2 421 aaPredicted RBP4.91□□□□□ -1.62
PROM1-220ENST00000540805 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.91□□□□□ -1.62
PROM1-220ENST00000540805 PMM1Q92871 262 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 FGF13Q92913 245 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 UCN3Q969E3 161 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 EID2BQ96D98 161 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 FBXO17Q96EF6 278 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 IL17FQ96PD4 163 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 ZNF607Q96SK3 696 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 SOSTQ9BQB4 213 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 SLC35A5Q9BS91 424 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 ADAT1Q9BUB4 502 aaKnown RBP4.91□□□□□ -1.62
PROM1-220ENST00000540805 JAM3Q9BX67 310 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 HEXA-AS1Q9H8Q6 139 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 SEMA3GQ9NS98 782 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 UBQLN2Q9UHD9 624 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 FBXL2Q9UKC9 423 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 MGAT4BQ9UQ53 548 aa4.91□□□□□ -1.62
PROM1-220ENST00000540805 TRBV4-1A0A0J9YWV2 114 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms