RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 CLCA3PQ9Y6N3 262 aa20.76■□□□□ 0.91
HOMER3-204ENST00000539827 SEC16AO15027 2179 aa20.76■□□□□ 0.91
HOMER3-204ENST00000539827 TCRBV16S1A1N1A0A5B0 115 aa20.76■□□□□ 0.91
HOMER3-204ENST00000539827 SLC37A1P57057 533 aa20.76■□□□□ 0.91
HOMER3-204ENST00000539827 NSDHLQ15738 373 aa20.76■□□□□ 0.91
HOMER3-204ENST00000539827 PHF19Q5T6S3 580 aa20.76■□□□□ 0.91
HOMER3-204ENST00000539827 RHBDD2Q6NTF9 364 aa20.76■□□□□ 0.91
HOMER3-204ENST00000539827 RRM2BQ7LG56 351 aa20.76■□□□□ 0.91
HOMER3-204ENST00000539827 SLC38A9Q8NBW4 561 aa20.76■□□□□ 0.91
HOMER3-204ENST00000539827 ZBTB44Q8NCP5 570 aa20.76■□□□□ 0.91
HOMER3-204ENST00000539827 TMEM255BQ8WV15 326 aa20.76■□□□□ 0.91
HOMER3-204ENST00000539827 FKBP10Q96AY3 582 aa20.76■□□□□ 0.91
HOMER3-204ENST00000539827 FAM46AQ96IP4 442 aaKnown RBP20.76■□□□□ 0.91
HOMER3-204ENST00000539827 LMF1Q96S06 567 aa20.76■□□□□ 0.91
HOMER3-204ENST00000539827 VN1R1Q9GZP7 353 aa20.76■□□□□ 0.91
HOMER3-204ENST00000539827 ARMC7Q9H6L4 198 aa20.76■□□□□ 0.91
HOMER3-204ENST00000539827 SLC24A3Q9HC58 644 aa20.76■□□□□ 0.91
HOMER3-204ENST00000539827 AMBNQ9NP70 447 aa20.76■□□□□ 0.91
HOMER3-204ENST00000539827 MKKSQ9NPJ1 570 aaPredicted RBP20.76■□□□□ 0.91
HOMER3-204ENST00000539827 RSL24D1Q9UHA3 163 aaKnown RBP20.76■□□□□ 0.91
HOMER3-204ENST00000539827 RARRES3Q9UL19 164 aa20.76■□□□□ 0.91
HOMER3-204ENST00000539827 ENO4A6NNW6 628 aa20.75■□□□□ 0.91
HOMER3-204ENST00000539827 PIP5K1CO60331 668 aa20.75■□□□□ 0.91
HOMER3-204ENST00000539827 NUDT6P53370 316 aa20.75■□□□□ 0.91
HOMER3-204ENST00000539827 ROR2Q01974 943 aaKnown RBP20.75■□□□□ 0.91
HOMER3-204ENST00000539827 COX10Q12887 443 aa20.75■□□□□ 0.91
HOMER3-204ENST00000539827 DECR1Q16698 335 aa20.75■□□□□ 0.91
HOMER3-204ENST00000539827 SLX4IPQ5VYV7 408 aa20.75■□□□□ 0.91
HOMER3-204ENST00000539827 TCEAL6Q6IPX3 200 aa20.75■□□□□ 0.91
HOMER3-204ENST00000539827 CD300LDQ6UXZ3 194 aa20.75■□□□□ 0.91
HOMER3-204ENST00000539827 PTCHD4Q6ZW05 846 aa20.75■□□□□ 0.91
HOMER3-204ENST00000539827 IQCF1Q8N6M8 205 aa20.75■□□□□ 0.91
HOMER3-204ENST00000539827 ZSCAN1Q8NBB4 408 aa20.75■□□□□ 0.91
HOMER3-204ENST00000539827 PIGXQ8TBF5 258 aa20.75■□□□□ 0.91
HOMER3-204ENST00000539827 SLC2A12Q8TD20 617 aa20.75■□□□□ 0.91
HOMER3-204ENST00000539827 ACOT11Q8WXI4 607 aaPredicted RBP20.75■□□□□ 0.91
HOMER3-204ENST00000539827 TCEAL3Q969E4 200 aa20.75■□□□□ 0.91
HOMER3-204ENST00000539827 CNIH4Q9P003 139 aa20.75■□□□□ 0.91
HOMER3-204ENST00000539827 DYRK3O43781 588 aa20.74■□□□□ 0.91
HOMER3-204ENST00000539827 DDAH2O95865 285 aa20.74■□□□□ 0.91
HOMER3-204ENST00000539827 MT-ND2P03891 347 aa20.74■□□□□ 0.91
HOMER3-204ENST00000539827 GUSBP08236 651 aa20.74■□□□□ 0.91
HOMER3-204ENST00000539827 DRD5P21918 477 aa20.74■□□□□ 0.91
HOMER3-204ENST00000539827 MAP2K4P45985 399 aa20.74■□□□□ 0.91
HOMER3-204ENST00000539827 FAAH2Q6GMR7 532 aa20.74■□□□□ 0.91
HOMER3-204ENST00000539827 PWWP2BQ6NUJ5 590 aa20.74■□□□□ 0.91
HOMER3-204ENST00000539827 AHSA2Q719I0 299 aa20.74■□□□□ 0.91
HOMER3-204ENST00000539827 KIF18BQ86Y91 864 aa20.74■□□□□ 0.91
HOMER3-204ENST00000539827 RNF217Q8TC41 542 aa20.74■□□□□ 0.91
HOMER3-204ENST00000539827 ZNF721Q8TF20 911 aa20.74■□□□□ 0.91
HOMER3-204ENST00000539827 GFM1Q96RP9 751 aaKnown RBP20.74■□□□□ 0.91
HOMER3-204ENST00000539827 G6PC3Q9BUM1 346 aa20.74■□□□□ 0.91
HOMER3-204ENST00000539827 LHPPQ9H008 270 aa20.74■□□□□ 0.91
HOMER3-204ENST00000539827 ARRDC1-AS1Q9H2J1 176 aa20.74■□□□□ 0.91
HOMER3-204ENST00000539827 DSN1Q9H410 356 aa20.74■□□□□ 0.91
HOMER3-204ENST00000539827 PCDHGA10Q9Y5H3 936 aa20.74■□□□□ 0.91
HOMER3-204ENST00000539827 TRAPPC13A5PLN9 417 aa20.74■□□□□ 0.91
HOMER3-204ENST00000539827 RGS10O43665 173 aa20.74■□□□□ 0.91
HOMER3-204ENST00000539827 SCRG1O75711 98 aa20.74■□□□□ 0.91
HOMER3-204ENST00000539827 PCMT1P22061 227 aa20.74■□□□□ 0.91
HOMER3-204ENST00000539827 IFNGR2P38484 337 aa20.74■□□□□ 0.91
HOMER3-204ENST00000539827 ALDH6A1Q02252 535 aaKnown RBP20.74■□□□□ 0.91
HOMER3-204ENST00000539827 ELAVL1Q15717 326 aaKnown RBP20.74■□□□□ 0.91
HOMER3-204ENST00000539827 GPR107Q5VW38 600 aa20.74■□□□□ 0.91
HOMER3-204ENST00000539827 ATOH1Q92858 354 aaPredicted RBP20.74■□□□□ 0.91
HOMER3-204ENST00000539827 PHOX2BQ99453 314 aa20.74■□□□□ 0.91
HOMER3-204ENST00000539827 NUDT9Q9BW91 350 aa20.74■□□□□ 0.91
HOMER3-204ENST00000539827 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.74■□□□□ 0.91
HOMER3-204ENST00000539827 OCIAD1Q9NX40 245 aa20.74■□□□□ 0.91
HOMER3-204ENST00000539827 TTC36A6NLP5 189 aa20.73■□□□□ 0.91
HOMER3-204ENST00000539827 RORAP35398 523 aa20.73■□□□□ 0.91
HOMER3-204ENST00000539827 OMPP47874 163 aa20.73■□□□□ 0.91
HOMER3-204ENST00000539827 DUSP3P51452 185 aaPredicted RBP20.73■□□□□ 0.91
HOMER3-204ENST00000539827 ATP12AP54707 1039 aa20.73■□□□□ 0.91
HOMER3-204ENST00000539827 ANGPT1Q15389 498 aa20.73■□□□□ 0.91
HOMER3-204ENST00000539827 ZNF141Q15928 474 aa20.73■□□□□ 0.91
HOMER3-204ENST00000539827 C12orf73Q69YU5 71 aa20.73■□□□□ 0.91
HOMER3-204ENST00000539827 LANCL3Q6ZV70 420 aa20.73■□□□□ 0.91
HOMER3-204ENST00000539827 NRMQ8IXM6 262 aa20.73■□□□□ 0.91
HOMER3-204ENST00000539827 EFHD2Q96C19 240 aaPredicted RBP20.73■□□□□ 0.91
HOMER3-204ENST00000539827 SLC46A1Q96NT5 459 aa20.73■□□□□ 0.91
HOMER3-204ENST00000539827 IL4I1Q96RQ9 567 aa20.73■□□□□ 0.91
HOMER3-204ENST00000539827 TUBA1CQ9BQE3 449 aa20.73■□□□□ 0.91
HOMER3-204ENST00000539827 PRSS27Q9BQR3 290 aa20.73■□□□□ 0.91
HOMER3-204ENST00000539827 EGLN3Q9H6Z9 239 aa20.73■□□□□ 0.91
HOMER3-204ENST00000539827 APMAPQ9HDC9 416 aa20.73■□□□□ 0.91
HOMER3-204ENST00000539827 NPIPB9F8W1W9 429 aa20.72■□□□□ 0.91
HOMER3-204ENST00000539827 GSTM3P21266 225 aa20.72■□□□□ 0.91
HOMER3-204ENST00000539827 CSNK2BP67870 215 aa20.72■□□□□ 0.91
HOMER3-204ENST00000539827 EMX1Q04741 257 aaPredicted RBP20.72■□□□□ 0.91
HOMER3-204ENST00000539827 MBOAT2Q6ZWT7 520 aa20.72■□□□□ 0.91
HOMER3-204ENST00000539827 AMER2Q8N7J2 671 aa20.72■□□□□ 0.91
HOMER3-204ENST00000539827 OR13F1Q8NGS4 319 aa20.72■□□□□ 0.91
HOMER3-204ENST00000539827 IPCEF1Q8WWN9 437 aaPredicted RBP20.72■□□□□ 0.91
HOMER3-204ENST00000539827 GGHQ92820 318 aa20.72■□□□□ 0.91
HOMER3-204ENST00000539827 NXF5Q9H1B4 397 aaKnown RBP20.72■□□□□ 0.91
HOMER3-204ENST00000539827 PLCXD1Q9NUJ7 323 aa20.72■□□□□ 0.91
HOMER3-204ENST00000539827 SIDT1Q9NXL6 827 aaKnown RBP20.72■□□□□ 0.91
HOMER3-204ENST00000539827 DNAJB12Q9NXW2 375 aaKnown RBP20.72■□□□□ 0.91
HOMER3-204ENST00000539827 TESQ9UGI8 421 aaKnown RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms