RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 WISP1O95388 367 aa11.88□□□□□ -0.51
CCDC42-202ENST00000539522 UTS2O95399 124 aa11.88□□□□□ -0.51
CCDC42-202ENST00000539522 OXSR1O95747 527 aaPredicted RBP11.88□□□□□ -0.51
CCDC42-202ENST00000539522 RFPL3SP0C7P2 107 aa11.88□□□□□ -0.51
CCDC42-202ENST00000539522 CNR1P21554 472 aa11.88□□□□□ -0.51
CCDC42-202ENST00000539522 MST1P26927 711 aa11.88□□□□□ -0.51
CCDC42-202ENST00000539522 CASRP41180 1078 aa11.88□□□□□ -0.51
CCDC42-202ENST00000539522 RFX3P48380 749 aa11.88□□□□□ -0.51
CCDC42-202ENST00000539522 KHKP50053 298 aa11.88□□□□□ -0.51
CCDC42-202ENST00000539522 MEOX1P50221 254 aa11.88□□□□□ -0.51
CCDC42-202ENST00000539522 CRYBA2P53672 197 aa11.88□□□□□ -0.51
CCDC42-202ENST00000539522 CHRNEQ04844 493 aa11.88□□□□□ -0.51
CCDC42-202ENST00000539522 FLOT2Q14254 428 aa11.88□□□□□ -0.51
CCDC42-202ENST00000539522 CD226Q15762 336 aa11.88□□□□□ -0.51
CCDC42-202ENST00000539522 DECR1Q16698 335 aa11.88□□□□□ -0.51
CCDC42-202ENST00000539522 SLC22A10Q63ZE4 541 aa11.88□□□□□ -0.51
CCDC42-202ENST00000539522 AAGABQ6PD74 315 aa11.88□□□□□ -0.51
CCDC42-202ENST00000539522 SERPINA11Q86U17 422 aa11.88□□□□□ -0.51
CCDC42-202ENST00000539522 IFNEQ86WN2 208 aa11.88□□□□□ -0.51
CCDC42-202ENST00000539522 DND1Q8IYX4 353 aaKnown RBP11.88□□□□□ -0.51
CCDC42-202ENST00000539522 WDSUB1Q8N9V3 476 aa11.88□□□□□ -0.51
CCDC42-202ENST00000539522 ZFP62Q8NB50 900 aaPredicted RBP11.88□□□□□ -0.51
CCDC42-202ENST00000539522 OR10A6Q8NH74 314 aa11.88□□□□□ -0.51
CCDC42-202ENST00000539522 SLC38A5Q8WUX1 472 aa11.88□□□□□ -0.51
CCDC42-202ENST00000539522 XAGE5Q8WWM1 108 aa11.88□□□□□ -0.51
CCDC42-202ENST00000539522 SECISBP2Q96T21 854 aaKnown RBP11.88□□□□□ -0.51
CCDC42-202ENST00000539522 SPATA9Q9BWV2 254 aa11.88□□□□□ -0.51
CCDC42-202ENST00000539522 TRIM15Q9C019 465 aa11.88□□□□□ -0.51
CCDC42-202ENST00000539522 QRSL1Q9H0R6 528 aaKnown RBP11.88□□□□□ -0.51
CCDC42-202ENST00000539522 ACTR3BQ9P1U1 418 aa11.88□□□□□ -0.51
CCDC42-202ENST00000539522 CHST2Q9Y4C5 530 aa11.88□□□□□ -0.51
CCDC42-202ENST00000539522 FAM208BQ5VWN6 2430 aa11.88□□□□□ -0.51
CCDC42-202ENST00000539522 COL6A6A6NMZ7 2263 aa11.88□□□□□ -0.51
CCDC42-202ENST00000539522 ELOVL7A1L3X0 281 aa11.87□□□□□ -0.51
CCDC42-202ENST00000539522 GSTA4O15217 222 aa11.87□□□□□ -0.51
CCDC42-202ENST00000539522 KIAA0513O60268 411 aa11.87□□□□□ -0.51
CCDC42-202ENST00000539522 FKBP6O75344 327 aa11.87□□□□□ -0.51
CCDC42-202ENST00000539522 UGT2B17O75795 530 aa11.87□□□□□ -0.51
CCDC42-202ENST00000539522 H6PDO95479 791 aa11.87□□□□□ -0.51
CCDC42-202ENST00000539522 GUSBP08236 651 aa11.87□□□□□ -0.51
CCDC42-202ENST00000539522 CD46P15529 392 aa11.87□□□□□ -0.51
CCDC42-202ENST00000539522 EVI2BP34910 448 aa11.87□□□□□ -0.51
CCDC42-202ENST00000539522 CRATP43155 626 aa11.87□□□□□ -0.51
CCDC42-202ENST00000539522 MAGEA8P43361 318 aa11.87□□□□□ -0.51
CCDC42-202ENST00000539522 DSTNP60981 165 aa11.87□□□□□ -0.51
CCDC42-202ENST00000539522 PSPHP78330 225 aa11.87□□□□□ -0.51
CCDC42-202ENST00000539522 TXNL4AP83876 142 aaKnown RBP11.87□□□□□ -0.51
CCDC42-202ENST00000539522 FXNQ16595 210 aa11.87□□□□□ -0.51
CCDC42-202ENST00000539522 KLHL26Q53HC5 615 aa11.87□□□□□ -0.51
CCDC42-202ENST00000539522 RPS26P11Q5JNZ5 115 aaPredicted RBP11.87□□□□□ -0.51
CCDC42-202ENST00000539522 ERICH5Q6P6B1 374 aa11.87□□□□□ -0.51
CCDC42-202ENST00000539522 ANGPTL8Q6UXH0 198 aa11.87□□□□□ -0.51
CCDC42-202ENST00000539522 MARCH3Q86UD3 253 aa11.87□□□□□ -0.51
CCDC42-202ENST00000539522 COMTD1Q86VU5 262 aa11.87□□□□□ -0.51
CCDC42-202ENST00000539522 SIAH3Q8IW03 269 aa11.87□□□□□ -0.51
CCDC42-202ENST00000539522 ZZZ3Q8IYH5 903 aa11.87□□□□□ -0.51
CCDC42-202ENST00000539522 CISD2Q8N5K1 135 aaKnown RBP11.87□□□□□ -0.51
CCDC42-202ENST00000539522 TEX19Q8NA77 164 aa11.87□□□□□ -0.51
CCDC42-202ENST00000539522 FAM156AQ8NDB6 213 aa11.87□□□□□ -0.51
CCDC42-202ENST00000539522 OR2T12Q8NG77 320 aa11.87□□□□□ -0.51
CCDC42-202ENST00000539522 STMN2Q93045 179 aa11.87□□□□□ -0.51
CCDC42-202ENST00000539522 POP5Q969H6 163 aaKnown RBP11.87□□□□□ -0.51
CCDC42-202ENST00000539522 SNRNP40Q96DI7 357 aaKnown RBP11.87□□□□□ -0.51
CCDC42-202ENST00000539522 REXO5Q96IC2 774 aaKnown RBP11.87□□□□□ -0.51
CCDC42-202ENST00000539522 LRGUKQ96M69 825 aa11.87□□□□□ -0.51
CCDC42-202ENST00000539522 PCDHAC1Q9H158 963 aa11.87□□□□□ -0.51
CCDC42-202ENST00000539522 DCLRE1BQ9H816 532 aa11.87□□□□□ -0.51
CCDC42-202ENST00000539522 A4GALTQ9NPC4 353 aa11.87□□□□□ -0.51
CCDC42-202ENST00000539522 TIMMDC1Q9NPL8 285 aa11.87□□□□□ -0.51
CCDC42-202ENST00000539522 SACM1LQ9NTJ5 587 aa11.87□□□□□ -0.51
CCDC42-202ENST00000539522 RYDENQ9NUL5 291 aaKnown RBP11.87□□□□□ -0.51
CCDC42-202ENST00000539522 CNIH4Q9P003 139 aa11.87□□□□□ -0.51
CCDC42-202ENST00000539522 MKLN1Q9UL63 735 aa11.87□□□□□ -0.51
CCDC42-202ENST00000539522 FREM3P0C091 2139 aa11.86□□□□□ -0.51
CCDC42-202ENST00000539522 PRAMEF25A6NGN4 478 aa11.86□□□□□ -0.51
CCDC42-202ENST00000539522 DUXAA6NLW8 204 aa11.86□□□□□ -0.51
CCDC42-202ENST00000539522 AQP12BA6NM10 295 aa11.86□□□□□ -0.51
CCDC42-202ENST00000539522 CLDN24A6NM45 220 aa11.86□□□□□ -0.51
CCDC42-202ENST00000539522 FAM220BPB1ANY3 271 aa11.86□□□□□ -0.51
CCDC42-202ENST00000539522 SOX30O94993 753 aa11.86□□□□□ -0.51
CCDC42-202ENST00000539522 NGFRP08138 427 aa11.86□□□□□ -0.51
CCDC42-202ENST00000539522 CELA3AP09093 270 aa11.86□□□□□ -0.51
CCDC42-202ENST00000539522 ARAFP10398 606 aa11.86□□□□□ -0.51
CCDC42-202ENST00000539522 TBXA2RP21731 343 aa11.86□□□□□ -0.51
CCDC42-202ENST00000539522 RPS4Y1P22090 263 aaKnown RBP11.86□□□□□ -0.51
CCDC42-202ENST00000539522 IL12BP29460 328 aa11.86□□□□□ -0.51
CCDC42-202ENST00000539522 TMED10P49755 219 aaKnown RBP11.86□□□□□ -0.51
CCDC42-202ENST00000539522 TDGF1P3P51864 188 aa11.86□□□□□ -0.51
CCDC42-202ENST00000539522 MLLT10P55197 1068 aa11.86□□□□□ -0.51
CCDC42-202ENST00000539522 FADDQ13158 208 aa11.86□□□□□ -0.51
CCDC42-202ENST00000539522 CCNIQ14094 377 aa11.86□□□□□ -0.51
CCDC42-202ENST00000539522 EFR3AQ14156 821 aa11.86□□□□□ -0.51
CCDC42-202ENST00000539522 HYAL4Q2M3T9 481 aa11.86□□□□□ -0.51
CCDC42-202ENST00000539522 NDUFAF6Q330K2 333 aa11.86□□□□□ -0.51
CCDC42-202ENST00000539522 GLYATQ6IB77 296 aa11.86□□□□□ -0.51
CCDC42-202ENST00000539522 CHERPQ8IWX8 916 aaKnown RBP11.86□□□□□ -0.51
CCDC42-202ENST00000539522 AQP12AQ8IXF9 295 aa11.86□□□□□ -0.51
CCDC42-202ENST00000539522 MICU2Q8IYU8 434 aa11.86□□□□□ -0.51
CCDC42-202ENST00000539522 ARSGQ96EG1 525 aa11.86□□□□□ -0.51
CCDC42-202ENST00000539522 TMEM19Q96HH6 336 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms