RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 PLGLB1Q02325 96 aa11.91□□□□□ -0.5
CHFR-216ENST00000538235 ZNF117Q03924 483 aa11.91□□□□□ -0.5
CHFR-216ENST00000538235 LRRC74AQ0VAA2 488 aa11.91□□□□□ -0.5
CHFR-216ENST00000538235 C3AR1Q16581 482 aa11.91□□□□□ -0.5
CHFR-216ENST00000538235 KLHL26Q53HC5 615 aa11.91□□□□□ -0.5
CHFR-216ENST00000538235 EMC4Q5J8M3 183 aa11.91□□□□□ -0.5
CHFR-216ENST00000538235 PDZK1Q5T2W1 519 aa11.91□□□□□ -0.5
CHFR-216ENST00000538235 AP1ARQ63HQ0 302 aa11.91□□□□□ -0.5
CHFR-216ENST00000538235 SLC30A6Q6NXT4 461 aa11.91□□□□□ -0.5
CHFR-216ENST00000538235 C8orf82Q6P1X6 216 aaPredicted RBP11.91□□□□□ -0.5
CHFR-216ENST00000538235 CPLX4Q7Z7G2 160 aa11.91□□□□□ -0.5
CHFR-216ENST00000538235 FAM109AQ8N4B1 249 aa11.91□□□□□ -0.5
CHFR-216ENST00000538235 ST6GALNAC3Q8NDV1 305 aa11.91□□□□□ -0.5
CHFR-216ENST00000538235 DNAJB8Q8NHS0 232 aa11.91□□□□□ -0.5
CHFR-216ENST00000538235 TSPEARQ8WU66 669 aa11.91□□□□□ -0.5
CHFR-216ENST00000538235 SLC38A5Q8WUX1 472 aa11.91□□□□□ -0.5
CHFR-216ENST00000538235 TMEM19Q96HH6 336 aa11.91□□□□□ -0.5
CHFR-216ENST00000538235 DOCK7Q96N67 2140 aa11.91□□□□□ -0.5
CHFR-216ENST00000538235 ANKRD27Q96NW4 1050 aa11.91□□□□□ -0.5
CHFR-216ENST00000538235 NSRP1Q9H0G5 558 aaKnown RBP11.91□□□□□ -0.5
CHFR-216ENST00000538235 ARL8BQ9NVJ2 186 aa11.91□□□□□ -0.5
CHFR-216ENST00000538235 MED11Q9P086 117 aa11.91□□□□□ -0.5
CHFR-216ENST00000538235 ABCG2Q9UNQ0 655 aa11.91□□□□□ -0.5
CHFR-216ENST00000538235 L3MBTL1Q9Y468 752 aa11.91□□□□□ -0.5
CHFR-216ENST00000538235 MYO7BQ6PIF6 2116 aa11.9□□□□□ -0.5
CHFR-216ENST00000538235 IGLV3-32A0A0A0MS00 114 aa11.9□□□□□ -0.5
CHFR-216ENST00000538235 A0A1B0GTH9 108 aa11.9□□□□□ -0.5
CHFR-216ENST00000538235 ANGPT2O15123 496 aa11.9□□□□□ -0.5
CHFR-216ENST00000538235 EPPINO95925 133 aa11.9□□□□□ -0.5
CHFR-216ENST00000538235 FAM107AO95990 144 aa11.9□□□□□ -0.5
CHFR-216ENST00000538235 KRT16P08779 473 aa11.9□□□□□ -0.5
CHFR-216ENST00000538235 ARAFP10398 606 aa11.9□□□□□ -0.5
CHFR-216ENST00000538235 EDN3P14138 238 aa11.9□□□□□ -0.5
CHFR-216ENST00000538235 GPX2P18283 190 aa11.9□□□□□ -0.5
CHFR-216ENST00000538235 KRT20P35900 424 aa11.9□□□□□ -0.5
CHFR-216ENST00000538235 CRATP43155 626 aa11.9□□□□□ -0.5
CHFR-216ENST00000538235 CPA2P48052 419 aa11.9□□□□□ -0.5
CHFR-216ENST00000538235 CRYBA2P53672 197 aa11.9□□□□□ -0.5
CHFR-216ENST00000538235 PSPHP78330 225 aa11.9□□□□□ -0.5
CHFR-216ENST00000538235 SNTA1Q13424 505 aa11.9□□□□□ -0.5
CHFR-216ENST00000538235 NFYCQ13952 458 aa11.9□□□□□ -0.5
CHFR-216ENST00000538235 GPR68Q15743 365 aa11.9□□□□□ -0.5
CHFR-216ENST00000538235 ZNF141Q15928 474 aa11.9□□□□□ -0.5
CHFR-216ENST00000538235 TRMT5Q32P41 509 aaKnown RBP11.9□□□□□ -0.5
CHFR-216ENST00000538235 FLYWCH1Q4VC44 716 aa11.9□□□□□ -0.5
CHFR-216ENST00000538235 WIPI1Q5MNZ9 446 aaPredicted RBP11.9□□□□□ -0.5
CHFR-216ENST00000538235 TBCELQ5QJ74 424 aa11.9□□□□□ -0.5
CHFR-216ENST00000538235 BHLHB9Q6PI77 547 aa11.9□□□□□ -0.5
CHFR-216ENST00000538235 YRDCQ86U90 279 aaKnown RBP11.9□□□□□ -0.5
CHFR-216ENST00000538235 RPRMLQ8N4K4 120 aa11.9□□□□□ -0.5
CHFR-216ENST00000538235 TRIML2Q8N7C3 387 aa11.9□□□□□ -0.5
CHFR-216ENST00000538235 FAM83FQ8NEG4 500 aaPredicted RBP11.9□□□□□ -0.5
CHFR-216ENST00000538235 OR5M1Q8NGP8 315 aa11.9□□□□□ -0.5
CHFR-216ENST00000538235 TMCO6Q96DC7 493 aa11.9□□□□□ -0.5
CHFR-216ENST00000538235 PCNX1Q96RV3 2341 aa11.9□□□□□ -0.5
CHFR-216ENST00000538235 OR2B2Q9GZK3 357 aa11.9□□□□□ -0.5
CHFR-216ENST00000538235 DSN1Q9H410 356 aa11.9□□□□□ -0.5
CHFR-216ENST00000538235 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.9□□□□□ -0.5
CHFR-216ENST00000538235 BOKQ9UMX3 212 aaPredicted RBP11.9□□□□□ -0.5
CHFR-216ENST00000538235 SLC6A5Q9Y345 797 aa11.9□□□□□ -0.5
CHFR-216ENST00000538235 DIDO1Q9BTC0 2240 aaKnown RBP11.9□□□□□ -0.51
CHFR-216ENST00000538235 MED12LQ86YW9 2145 aa11.89□□□□□ -0.51
CHFR-216ENST00000538235 SLC22A2O15244 555 aa11.89□□□□□ -0.51
CHFR-216ENST00000538235 ZIC3O60481 467 aa11.89□□□□□ -0.51
CHFR-216ENST00000538235 CDC40O60508 579 aaKnown RBP eCLIP11.89□□□□□ -0.51
CHFR-216ENST00000538235 SNX4O95219 450 aa11.89□□□□□ -0.51
CHFR-216ENST00000538235 KRT75O95678 551 aa11.89□□□□□ -0.51
CHFR-216ENST00000538235 CRYABP02511 175 aaKnown RBP11.89□□□□□ -0.51
CHFR-216ENST00000538235 HPNP05981 417 aa11.89□□□□□ -0.51
CHFR-216ENST00000538235 GDF1P27539 372 aa11.89□□□□□ -0.51
CHFR-216ENST00000538235 MASP1P48740 699 aa11.89□□□□□ -0.51
CHFR-216ENST00000538235 ATP12AP54707 1039 aa11.89□□□□□ -0.51
CHFR-216ENST00000538235 TOMM34Q15785 309 aaPredicted RBP11.89□□□□□ -0.51
CHFR-216ENST00000538235 EIF2S3LQ2VIR3 472 aaKnown RBP11.89□□□□□ -0.51
CHFR-216ENST00000538235 NANOGP8Q6NSW7 305 aa11.89□□□□□ -0.51
CHFR-216ENST00000538235 ARSKQ6UWY0 536 aa11.89□□□□□ -0.51
CHFR-216ENST00000538235 C16orf62Q7Z3J2 963 aa11.89□□□□□ -0.51
CHFR-216ENST00000538235 PLCZ1Q86YW0 608 aa11.89□□□□□ -0.51
CHFR-216ENST00000538235 ZZZ3Q8IYH5 903 aa11.89□□□□□ -0.51
CHFR-216ENST00000538235 ZNF619Q8N2I2 560 aa11.89□□□□□ -0.51
CHFR-216ENST00000538235 FITM2Q8N6M3 262 aa11.89□□□□□ -0.51
CHFR-216ENST00000538235 FAM98AQ8NCA5 519 aaKnown RBP11.89□□□□□ -0.51
CHFR-216ENST00000538235 GALNT11Q8NCW6 608 aa11.89□□□□□ -0.51
CHFR-216ENST00000538235 FAM71CQ8NEG0 241 aa11.89□□□□□ -0.51
CHFR-216ENST00000538235 NFKBIDQ8NI38 313 aa11.89□□□□□ -0.51
CHFR-216ENST00000538235 POC1BQ8TC44 478 aa11.89□□□□□ -0.51
CHFR-216ENST00000538235 DUSP19Q8WTR2 217 aa11.89□□□□□ -0.51
CHFR-216ENST00000538235 LRRC58Q96CX6 371 aa11.89□□□□□ -0.51
CHFR-216ENST00000538235 SH3YL1Q96HL8 342 aaPredicted RBP11.89□□□□□ -0.51
CHFR-216ENST00000538235 WFDC6Q9BQY6 131 aa11.89□□□□□ -0.51
CHFR-216ENST00000538235 GPATCH1Q9BRR8 931 aaKnown RBP11.89□□□□□ -0.51
CHFR-216ENST00000538235 NANOGQ9H9S0 305 aa11.89□□□□□ -0.51
CHFR-216ENST00000538235 A4GALTQ9NPC4 353 aa11.89□□□□□ -0.51
CHFR-216ENST00000538235 RYDENQ9NUL5 291 aaKnown RBP11.89□□□□□ -0.51
CHFR-216ENST00000538235 CMTM6Q9NX76 183 aa11.89□□□□□ -0.51
CHFR-216ENST00000538235 SEC14L3Q9UDX4 400 aa11.89□□□□□ -0.51
CHFR-216ENST00000538235 ZNF835Q9Y2P0 537 aa11.89□□□□□ -0.51
CHFR-216ENST00000538235 ARL2BPQ9Y2Y0 163 aa11.89□□□□□ -0.51
CHFR-216ENST00000538235 WDR45Q9Y484 360 aa11.89□□□□□ -0.51
CHFR-216ENST00000538235 A0A1B0GVC2 190 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms