RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 ISG20L2Q9H9L3 353 aaKnown RBP13.34□□□□□ -0.27
USP44-203ENST00000537435 PLSCR3Q9NRY6 295 aa13.34□□□□□ -0.27
USP44-203ENST00000537435 PAQR5Q9NXK6 330 aaPredicted RBP13.34□□□□□ -0.27
USP44-203ENST00000537435 NTMQ9P121 344 aa13.34□□□□□ -0.27
USP44-203ENST00000537435 TBC1D29Q9UFV1 150 aa13.34□□□□□ -0.27
USP44-203ENST00000537435 ZC3H12DA2A288 527 aaKnown RBP13.34□□□□□ -0.27
USP44-203ENST00000537435 AGR2O95994 175 aa13.34□□□□□ -0.27
USP44-203ENST00000537435 PSKH1P11801 424 aa13.34□□□□□ -0.27
USP44-203ENST00000537435 FUT1P19526 365 aa13.34□□□□□ -0.27
USP44-203ENST00000537435 MLLT3P42568 568 aaPredicted RBP13.34□□□□□ -0.27
USP44-203ENST00000537435 ZNF136P52737 540 aa13.34□□□□□ -0.27
USP44-203ENST00000537435 SEC13P55735 322 aa13.34□□□□□ -0.27
USP44-203ENST00000537435 CD83Q01151 205 aa13.34□□□□□ -0.27
USP44-203ENST00000537435 ZNF776Q68DI1 518 aaPredicted RBP13.34□□□□□ -0.27
USP44-203ENST00000537435 MZT2AQ6P582 158 aa13.34□□□□□ -0.27
USP44-203ENST00000537435 NOXA1Q86UR1 476 aa13.34□□□□□ -0.27
USP44-203ENST00000537435 OR2L13Q8N349 312 aa13.34□□□□□ -0.27
USP44-203ENST00000537435 TOR1AIP2Q8NFQ8 470 aa13.34□□□□□ -0.27
USP44-203ENST00000537435 OR4K14Q8NGD5 310 aa13.34□□□□□ -0.27
USP44-203ENST00000537435 DOK4Q8TEW6 326 aa13.34□□□□□ -0.27
USP44-203ENST00000537435 RNF170Q96K19 258 aa13.34□□□□□ -0.27
USP44-203ENST00000537435 ART5Q96L15 291 aa13.34□□□□□ -0.27
USP44-203ENST00000537435 DPH1Q9BZG8 443 aa13.34□□□□□ -0.27
USP44-203ENST00000537435 SLC6A17Q9H1V8 727 aa13.34□□□□□ -0.27
USP44-203ENST00000537435 OR52D1Q9H346 318 aa13.34□□□□□ -0.27
USP44-203ENST00000537435 TRPV4Q9HBA0 871 aa13.34□□□□□ -0.27
USP44-203ENST00000537435 KRCC1Q9NPI7 259 aaPredicted RBP13.34□□□□□ -0.27
USP44-203ENST00000537435 GDE1Q9NZC3 331 aa13.34□□□□□ -0.27
USP44-203ENST00000537435 OR6C2Q9NZP2 312 aa13.34□□□□□ -0.27
USP44-203ENST00000537435 PCDHGB7Q9Y5F8 929 aa13.34□□□□□ -0.27
USP44-203ENST00000537435 HEBP2Q9Y5Z4 205 aa13.34□□□□□ -0.27
USP44-203ENST00000537435 TTC36A6NLP5 189 aa13.33□□□□□ -0.28
USP44-203ENST00000537435 C12orf71A8MTZ7 269 aa13.33□□□□□ -0.28
USP44-203ENST00000537435 J3QRE1 110 aa13.33□□□□□ -0.28
USP44-203ENST00000537435 SLC31A1O15431 190 aa13.33□□□□□ -0.28
USP44-203ENST00000537435 DNAJB6O75190 326 aa13.33□□□□□ -0.28
USP44-203ENST00000537435 PRG2P13727 222 aa13.33□□□□□ -0.28
USP44-203ENST00000537435 PAICSP22234 425 aaKnown RBP13.33□□□□□ -0.28
USP44-203ENST00000537435 EEF1A1P68104 462 aaKnown RBP13.33□□□□□ -0.28
USP44-203ENST00000537435 LILRB4Q8NHJ6 448 aa13.33□□□□□ -0.28
USP44-203ENST00000537435 PHOSPHO2Q8TCD6 241 aa13.33□□□□□ -0.28
USP44-203ENST00000537435 SDF2Q99470 211 aa13.33□□□□□ -0.28
USP44-203ENST00000537435 GDF15Q99988 308 aa13.33□□□□□ -0.28
USP44-203ENST00000537435 PRSS27Q9BQR3 290 aa13.33□□□□□ -0.28
USP44-203ENST00000537435 TMEM246Q9BRR3 403 aa13.33□□□□□ -0.28
USP44-203ENST00000537435 JAM3Q9BX67 310 aa13.33□□□□□ -0.28
USP44-203ENST00000537435 MKRN2Q9H000 416 aaKnown RBP13.33□□□□□ -0.28
USP44-203ENST00000537435 MED20Q9H944 212 aa13.33□□□□□ -0.28
USP44-203ENST00000537435 RBFOX1Q9NWB1 397 aaKnown RBP13.33□□□□□ -0.28
USP44-203ENST00000537435 KCMF1Q9P0J7 381 aa13.33□□□□□ -0.28
USP44-203ENST00000537435 PTGFRNQ9P2B2 879 aa13.33□□□□□ -0.28
USP44-203ENST00000537435 SCN3AQ9NY46 2000 aa13.33□□□□□ -0.28
USP44-203ENST00000537435 UNC119BA6NIH7 251 aa13.33□□□□□ -0.28
USP44-203ENST00000537435 GTPBP1O00178 669 aaKnown RBP13.33□□□□□ -0.28
USP44-203ENST00000537435 RNF13O43567 381 aa13.33□□□□□ -0.28
USP44-203ENST00000537435 YES1P07947 543 aa13.33□□□□□ -0.28
USP44-203ENST00000537435 GKN3PP0CG01 181 aa13.33□□□□□ -0.28
USP44-203ENST00000537435 PRKAR1AP10644 381 aa13.33□□□□□ -0.28
USP44-203ENST00000537435 AK4P27144 223 aaPredicted RBP13.33□□□□□ -0.28
USP44-203ENST00000537435 DBPQ10586 325 aaPredicted RBP13.33□□□□□ -0.28
USP44-203ENST00000537435 DUSP8Q13202 625 aa13.33□□□□□ -0.28
USP44-203ENST00000537435 MAPK14Q16539 360 aa13.33□□□□□ -0.28
USP44-203ENST00000537435 DEFB134Q4QY38 66 aa13.33□□□□□ -0.28
USP44-203ENST00000537435 MZT2BQ6NZ67 158 aa13.33□□□□□ -0.28
USP44-203ENST00000537435 FBXO42Q6P3S6 717 aa13.33□□□□□ -0.28
USP44-203ENST00000537435 SMARCD3Q6STE5 483 aa13.33□□□□□ -0.28
USP44-203ENST00000537435 WDR88Q6ZMY6 472 aa13.33□□□□□ -0.28
USP44-203ENST00000537435 YAF2Q8IY57 180 aa13.33□□□□□ -0.28
USP44-203ENST00000537435 NT5CQ8TCD5 201 aa13.33□□□□□ -0.28
USP44-203ENST00000537435 OR2M4Q96R27 311 aa13.33□□□□□ -0.28
USP44-203ENST00000537435 TBX5Q99593 518 aa13.33□□□□□ -0.28
USP44-203ENST00000537435 SFXN1Q9H9B4 322 aa13.33□□□□□ -0.28
USP44-203ENST00000537435 KLF15Q9UIH9 416 aa13.33□□□□□ -0.28
USP44-203ENST00000537435 NOX1Q9Y5S8 564 aa13.33□□□□□ -0.28
USP44-203ENST00000537435 TRBV23OR9-2A0A075B6M9 112 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 PRSS38A1L453 326 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 FAM25AB3EWG3 89 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 FAM25CB3EWG5 89 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 FAM25GB3EWG6 89 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 LYRM1O43325 122 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 PLRG1O43660 514 aaKnown RBP13.32□□□□□ -0.28
USP44-203ENST00000537435 SLC35G6P0C7Q6 338 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 MAKP20794 623 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 HLA-DMAP28067 261 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 HTR2AP28223 471 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 RNF144AP50876 292 aaPredicted RBP13.32□□□□□ -0.28
USP44-203ENST00000537435 FXYD6P3P58550 94 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 ID2Q02363 134 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 RUNX2Q13950 521 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 TATDN3Q17R31 274 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 TRMT12Q53H54 448 aaKnown RBP13.32□□□□□ -0.28
USP44-203ENST00000537435 EIPR1Q53HC9 387 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 NIPAL3Q6P499 406 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 PAMR1Q6UXH9 720 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 RANBP3LQ86VV4 465 aaPredicted RBP13.32□□□□□ -0.28
USP44-203ENST00000537435 GID4Q8IVV7 300 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 ACBD7Q8N6N7 88 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 PFN4Q8NHR9 129 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 FANK1Q8TC84 345 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 BRIX1Q8TDN6 353 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms