RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 PTCHD4Q6ZW05 846 aa12.05□□□□□ -0.48
CDK5RAP3-202ENST00000536708 AKAP14Q86UN6 197 aa12.05□□□□□ -0.48
CDK5RAP3-202ENST00000536708 LYSMD2Q8IV50 215 aa12.05□□□□□ -0.48
CDK5RAP3-202ENST00000536708 GPR135Q8IZ08 494 aa12.05□□□□□ -0.48
CDK5RAP3-202ENST00000536708 PEX11GQ96HA9 241 aa12.05□□□□□ -0.48
CDK5RAP3-202ENST00000536708 ZNF607Q96SK3 696 aa12.05□□□□□ -0.48
CDK5RAP3-202ENST00000536708 FAIM2Q9BWQ8 316 aa12.05□□□□□ -0.48
CDK5RAP3-202ENST00000536708 CDADC1Q9BWV3 514 aa12.05□□□□□ -0.48
CDK5RAP3-202ENST00000536708 ROGDIQ9GZN7 287 aa12.05□□□□□ -0.48
CDK5RAP3-202ENST00000536708 RACGAP1Q9H0H5 632 aa12.05□□□□□ -0.48
CDK5RAP3-202ENST00000536708 CES1P1Q9UKY3 287 aa12.05□□□□□ -0.48
CDK5RAP3-202ENST00000536708 CYR61O00622 381 aa12.04□□□□□ -0.48
CDK5RAP3-202ENST00000536708 LRP3O75074 770 aa12.04□□□□□ -0.48
CDK5RAP3-202ENST00000536708 SEMA7AO75326 666 aa12.04□□□□□ -0.48
CDK5RAP3-202ENST00000536708 NSA2O95478 260 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-202ENST00000536708 MSL3P1P0C860 447 aa12.04□□□□□ -0.48
CDK5RAP3-202ENST00000536708 ALAS2P22557 587 aa12.04□□□□□ -0.48
CDK5RAP3-202ENST00000536708 ELAVL4P26378 380 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-202ENST00000536708 BUD31P41223 144 aaPredicted RBP12.04□□□□□ -0.48
CDK5RAP3-202ENST00000536708 CCT3P49368 545 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-202ENST00000536708 RHAGQ02094 409 aa12.04□□□□□ -0.48
CDK5RAP3-202ENST00000536708 ZNF45Q02386 682 aa12.04□□□□□ -0.48
CDK5RAP3-202ENST00000536708 ZFP36L1Q07352 338 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-202ENST00000536708 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.04□□□□□ -0.48
CDK5RAP3-202ENST00000536708 ERV3-1Q14264 604 aa12.04□□□□□ -0.48
CDK5RAP3-202ENST00000536708 ZNF181Q2M3W8 571 aa12.04□□□□□ -0.48
CDK5RAP3-202ENST00000536708 TIMM50Q3ZCQ8 353 aa12.04□□□□□ -0.48
CDK5RAP3-202ENST00000536708 RPS26P11Q5JNZ5 115 aaPredicted RBP12.04□□□□□ -0.48
CDK5RAP3-202ENST00000536708 DCST1Q5T197 706 aa12.04□□□□□ -0.48
CDK5RAP3-202ENST00000536708 CD300LDQ6UXZ3 194 aa12.04□□□□□ -0.48
CDK5RAP3-202ENST00000536708 ASCL5Q7RTU5 278 aa12.04□□□□□ -0.48
CDK5RAP3-202ENST00000536708 TMEM151BQ8IW70 566 aa12.04□□□□□ -0.48
CDK5RAP3-202ENST00000536708 SLC7A5P1Q8MH63 180 aa12.04□□□□□ -0.48
CDK5RAP3-202ENST00000536708 SLC38A9Q8NBW4 561 aa12.04□□□□□ -0.48
CDK5RAP3-202ENST00000536708 SUN3Q8TAQ9 357 aa12.04□□□□□ -0.48
CDK5RAP3-202ENST00000536708 DOK4Q8TEW6 326 aa12.04□□□□□ -0.48
CDK5RAP3-202ENST00000536708 Q96MT0 163 aa12.04□□□□□ -0.48
CDK5RAP3-202ENST00000536708 TAPBPLQ9BX59 468 aa12.04□□□□□ -0.48
CDK5RAP3-202ENST00000536708 SIAEQ9HAT2 523 aa12.04□□□□□ -0.48
CDK5RAP3-202ENST00000536708 SLC35C2Q9NQQ7 365 aa12.04□□□□□ -0.48
CDK5RAP3-202ENST00000536708 RHCGQ9UBD6 479 aa12.04□□□□□ -0.48
CDK5RAP3-202ENST00000536708 PHF11Q9UIL8 331 aa12.04□□□□□ -0.48
CDK5RAP3-202ENST00000536708 MKLN1Q9UL63 735 aa12.04□□□□□ -0.48
CDK5RAP3-202ENST00000536708 CLCA2Q9UQC9 943 aa12.04□□□□□ -0.48
CDK5RAP3-202ENST00000536708 ASPMQ8IZT6 3477 aa12.04□□□□□ -0.48
CDK5RAP3-202ENST00000536708 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 EFCAB7A8K855 629 aa12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 FGF17O60258 216 aa12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 H1F0P07305 194 aaKnown RBP12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 CCL4P13236 92 aa12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 RCVRNP35243 200 aa12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 ETV6P41212 452 aa12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 RPS26P62854 115 aaKnown RBP12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 INSM1Q01101 510 aaPredicted RBP12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 ALDH6A1Q02252 535 aaKnown RBP12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 FAM53BQ14153 422 aa12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 NCF4Q15080 339 aa12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 LTB4RQ15722 352 aa12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 NDUFA5Q16718 116 aa12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 NDUFA9Q16795 377 aa12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 PWWP2BQ6NUJ5 590 aa12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 DEFB124Q8NES8 71 aa12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 MGLLQ99685 303 aa12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 HOXD1Q9GZZ0 328 aa12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 OR51E2Q9H255 320 aa12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 SERHL2Q9H4I8 314 aa12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 ANKRA2Q9H9E1 313 aa12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 LYRM4Q9HD34 91 aa12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 BCL2L10Q9HD36 194 aa12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 ABCB10Q9NRK6 738 aa12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 P2RX2Q9UBL9 471 aa12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 CELSR3Q9NYQ7 3312 aa12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 PTPRZ1P23471 2315 aaPredicted RBP12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 DCHS1Q96JQ0 3298 aa12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 PRAMEF27A3QJZ7 478 aa12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 TGFBR3LH3BV60 316 aa12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 RFPL3O75679 317 aa12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 ADRA2AP08913 450 aa12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 NCBP2P52298 156 aaKnown RBP eCLIP12.03□□□□□ -0.486e-7■■■■□ 23.5
CDK5RAP3-202ENST00000536708 UGT2B15P54855 530 aa12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 RAB38P57729 211 aa12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 SEC23BQ15437 767 aa12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 SPDYE7PQ495Y7 208 aa12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 GARNL3Q5VVW2 1013 aa12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 TMEM64Q6YI46 380 aa12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 PIP4P1Q86T03 277 aa12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 ATCAYQ86WG3 371 aa12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 LINC00471Q8N535 108 aa12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 BMPERQ8N8U9 685 aa12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 OR4D11Q8NGI4 311 aa12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 AMDHD1Q96NU7 426 aa12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 GLIPR2Q9H4G4 154 aa12.03□□□□□ -0.48
CDK5RAP3-202ENST00000536708 KNTC1P50748 2209 aa12.02□□□□□ -0.48
CDK5RAP3-202ENST00000536708 A0A1W2PRQ8 180 aa12.02□□□□□ -0.49
CDK5RAP3-202ENST00000536708 CCRL2O00421 344 aa12.02□□□□□ -0.49
CDK5RAP3-202ENST00000536708 GUCY1B2O75343 617 aa12.02□□□□□ -0.49
CDK5RAP3-202ENST00000536708 NME6O75414 186 aaPredicted RBP12.02□□□□□ -0.49
CDK5RAP3-202ENST00000536708 ENDOUP21128 410 aaKnown RBP12.02□□□□□ -0.49
CDK5RAP3-202ENST00000536708 CSTF2P33240 577 aaKnown RBP eCLIP12.02□□□□□ -0.49
CDK5RAP3-202ENST00000536708 EFNA3P52797 238 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms