RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 PCYOX1LQ8NBM8 494 aa11.97□□□□□ -0.49
TMEM258-202ENST00000535042 OR1J4Q8NGS1 313 aa11.97□□□□□ -0.49
TMEM258-202ENST00000535042 CMTM5Q96DZ9 223 aa11.97□□□□□ -0.49
TMEM258-202ENST00000535042 TMEM19Q96HH6 336 aa11.97□□□□□ -0.49
TMEM258-202ENST00000535042 KLHDC3Q9BQ90 382 aa11.97□□□□□ -0.49
TMEM258-202ENST00000535042 GPATCH1Q9BRR8 931 aaKnown RBP11.97□□□□□ -0.49
TMEM258-202ENST00000535042 TBL1XR1Q9BZK7 514 aa11.97□□□□□ -0.49
TMEM258-202ENST00000535042 HOXD1Q9GZZ0 328 aa11.97□□□□□ -0.49
TMEM258-202ENST00000535042 UBQLN3Q9H347 655 aa11.97□□□□□ -0.49
TMEM258-202ENST00000535042 KAT8Q9H7Z6 458 aaKnown RBP11.97□□□□□ -0.49
TMEM258-202ENST00000535042 ZDHHC11Q9H8X9 412 aa11.97□□□□□ -0.49
TMEM258-202ENST00000535042 A4GALTQ9NPC4 353 aa11.97□□□□□ -0.49
TMEM258-202ENST00000535042 POLE3Q9NRF9 147 aa11.97□□□□□ -0.49
TMEM258-202ENST00000535042 P2RX2Q9UBL9 471 aa11.97□□□□□ -0.49
TMEM258-202ENST00000535042 FBXL2Q9UKC9 423 aa11.97□□□□□ -0.49
TMEM258-202ENST00000535042 C15orf41Q9Y2V0 281 aa11.97□□□□□ -0.49
TMEM258-202ENST00000535042 LIPGQ9Y5X9 500 aa11.97□□□□□ -0.49
TMEM258-202ENST00000535042 EML6Q6ZMW3 1958 aa11.96□□□□□ -0.49
TMEM258-202ENST00000535042 DSPPQ9NZW4 1301 aa11.96□□□□□ -0.49
TMEM258-202ENST00000535042 A0A1W2PQD3 144 aa11.96□□□□□ -0.49
TMEM258-202ENST00000535042 PYCARD-AS1I3L0S3 204 aa11.96□□□□□ -0.49
TMEM258-202ENST00000535042 ACOT7O00154 380 aa11.96□□□□□ -0.49
TMEM258-202ENST00000535042 SCDO00767 359 aa11.96□□□□□ -0.49
TMEM258-202ENST00000535042 ZNHIT1O43257 154 aa11.96□□□□□ -0.49
TMEM258-202ENST00000535042 NDUFB5O43674 189 aa11.96□□□□□ -0.49
TMEM258-202ENST00000535042 PDE9AO76083 593 aa11.96□□□□□ -0.49
TMEM258-202ENST00000535042 NPPAP01160 153 aa11.96□□□□□ -0.49
TMEM258-202ENST00000535042 ARAFP10398 606 aa11.96□□□□□ -0.49
TMEM258-202ENST00000535042 SLC6A2P23975 617 aa11.96□□□□□ -0.49
TMEM258-202ENST00000535042 ELAVL4P26378 380 aaKnown RBP11.96□□□□□ -0.49
TMEM258-202ENST00000535042 CLK3P49761 638 aaKnown RBP11.96□□□□□ -0.49
TMEM258-202ENST00000535042 HSF1Q00613 529 aa11.96□□□□□ -0.49
TMEM258-202ENST00000535042 NDUFAF6Q330K2 333 aa11.96□□□□□ -0.49
TMEM258-202ENST00000535042 C8orf82Q6P1X6 216 aaPredicted RBP11.96□□□□□ -0.49
TMEM258-202ENST00000535042 ZNF605Q86T29 641 aa11.96□□□□□ -0.49
TMEM258-202ENST00000535042 CHERPQ8IWX8 916 aaKnown RBP11.96□□□□□ -0.49
TMEM258-202ENST00000535042 FAM109AQ8N4B1 249 aa11.96□□□□□ -0.49
TMEM258-202ENST00000535042 FADS6Q8N9I5 356 aa11.96□□□□□ -0.49
TMEM258-202ENST00000535042 OR2M3Q8NG83 312 aa11.96□□□□□ -0.49
TMEM258-202ENST00000535042 OR8J3Q8NGG0 315 aa11.96□□□□□ -0.49
TMEM258-202ENST00000535042 OR10A6Q8NH74 314 aa11.96□□□□□ -0.49
TMEM258-202ENST00000535042 NFKBIDQ8NI38 313 aa11.96□□□□□ -0.49
TMEM258-202ENST00000535042 GPR137Q96N19 417 aa11.96□□□□□ -0.49
TMEM258-202ENST00000535042 DSN1Q9H410 356 aa11.96□□□□□ -0.49
TMEM258-202ENST00000535042 EFCAB1Q9HAE3 211 aa11.96□□□□□ -0.49
TMEM258-202ENST00000535042 SDHAF3Q9NRP4 125 aa11.96□□□□□ -0.49
TMEM258-202ENST00000535042 GID8Q9NWU2 228 aa11.96□□□□□ -0.49
TMEM258-202ENST00000535042 THUMPD1Q9NXG2 353 aaKnown RBP11.96□□□□□ -0.49
TMEM258-202ENST00000535042 MED11Q9P086 117 aa11.96□□□□□ -0.49
TMEM258-202ENST00000535042 PPP4R1LQ9P1A2 415 aa11.96□□□□□ -0.49
TMEM258-202ENST00000535042 USP22Q9UPT9 525 aa11.96□□□□□ -0.49
TMEM258-202ENST00000535042 CORO2BQ9UQ03 480 aa11.96□□□□□ -0.49
TMEM258-202ENST00000535042 DTNAQ9Y4J8 743 aa11.96□□□□□ -0.49
TMEM258-202ENST00000535042 IGLV3-32A0A0A0MS00 114 aa11.95□□□□□ -0.5
TMEM258-202ENST00000535042 SERINC4A6NH21 518 aa11.95□□□□□ -0.5
TMEM258-202ENST00000535042 AGAP5A6NIR3 686 aa11.95□□□□□ -0.5
TMEM258-202ENST00000535042 CLDN24A6NM45 220 aa11.95□□□□□ -0.5
TMEM258-202ENST00000535042 GMFGO60234 142 aa11.95□□□□□ -0.5
TMEM258-202ENST00000535042 BCAS1O75363 584 aaPredicted RBP11.95□□□□□ -0.5
TMEM258-202ENST00000535042 CBR3O75828 277 aa11.95□□□□□ -0.5
TMEM258-202ENST00000535042 CBX6O95503 412 aa11.95□□□□□ -0.5
TMEM258-202ENST00000535042 EDN3P14138 238 aa11.95□□□□□ -0.5
TMEM258-202ENST00000535042 HPGDP15428 266 aa11.95□□□□□ -0.5
TMEM258-202ENST00000535042 GDF1P27539 372 aa11.95□□□□□ -0.5
TMEM258-202ENST00000535042 NUDT2P50583 147 aa11.95□□□□□ -0.5
TMEM258-202ENST00000535042 CRISP3P54108 245 aa11.95□□□□□ -0.5
TMEM258-202ENST00000535042 HPCAP84074 193 aa11.95□□□□□ -0.5
TMEM258-202ENST00000535042 FOXK1P85037 733 aa11.95□□□□□ -0.5
TMEM258-202ENST00000535042 CDK6Q00534 326 aa11.95□□□□□ -0.5
TMEM258-202ENST00000535042 PLAURQ03405 335 aa11.95□□□□□ -0.5
TMEM258-202ENST00000535042 C17orf67Q0P5P2 114 aa11.95□□□□□ -0.5
TMEM258-202ENST00000535042 CBLN3Q6UW01 205 aa11.95□□□□□ -0.5
TMEM258-202ENST00000535042 HACD2Q6Y1H2 254 aa11.95□□□□□ -0.5
TMEM258-202ENST00000535042 NET1Q7Z628 596 aaPredicted RBP11.95□□□□□ -0.5
TMEM258-202ENST00000535042 FGD2Q7Z6J4 655 aa11.95□□□□□ -0.5
TMEM258-202ENST00000535042 CALHM3Q86XJ0 350 aa11.95□□□□□ -0.5
TMEM258-202ENST00000535042 SLC15A3Q8IY34 581 aa11.95□□□□□ -0.5
TMEM258-202ENST00000535042 ZZZ3Q8IYH5 903 aa11.95□□□□□ -0.5
TMEM258-202ENST00000535042 ZNF614Q8N883 585 aa11.95□□□□□ -0.5
TMEM258-202ENST00000535042 FBXO27Q8NI29 283 aa11.95□□□□□ -0.5
TMEM258-202ENST00000535042 PHOSPHO1Q8TCT1 267 aa11.95□□□□□ -0.5
TMEM258-202ENST00000535042 TREX2Q9BQ50 279 aaPredicted RBP11.95□□□□□ -0.5
TMEM258-202ENST00000535042 RSPO3Q9BXY4 272 aaPredicted RBP11.95□□□□□ -0.5
TMEM258-202ENST00000535042 PIF1Q9H611 641 aa11.95□□□□□ -0.5
TMEM258-202ENST00000535042 TMEM38AQ9H6F2 299 aa11.95□□□□□ -0.5
TMEM258-202ENST00000535042 MTHFD2LQ9H903 347 aaPredicted RBP11.95□□□□□ -0.5
TMEM258-202ENST00000535042 BCL2L10Q9HD36 194 aa11.95□□□□□ -0.5
TMEM258-202ENST00000535042 PLSCR2Q9NRY7 297 aa11.95□□□□□ -0.5
TMEM258-202ENST00000535042 CMTM6Q9NX76 183 aa11.95□□□□□ -0.5
TMEM258-202ENST00000535042 GMPR2Q9P2T1 348 aaKnown RBP11.95□□□□□ -0.5
TMEM258-202ENST00000535042 SEC14L3Q9UDX4 400 aa11.95□□□□□ -0.5
TMEM258-202ENST00000535042 TAGLN3Q9UI15 199 aa11.95□□□□□ -0.5
TMEM258-202ENST00000535042 CFAP46Q8IYW2 2715 aa11.95□□□□□ -0.5
TMEM258-202ENST00000535042 CDC40O60508 579 aaKnown RBP eCLIP11.94□□□□□ -0.5
TMEM258-202ENST00000535042 TRAPPC6AO75865 159 aa11.94□□□□□ -0.5
TMEM258-202ENST00000535042 PGM3O95394 542 aa11.94□□□□□ -0.5
TMEM258-202ENST00000535042 IGHG3P01860 377 aa11.94□□□□□ -0.5
TMEM258-202ENST00000535042 HPNP05981 417 aa11.94□□□□□ -0.5
TMEM258-202ENST00000535042 RPS4Y1P22090 263 aaKnown RBP11.94□□□□□ -0.5
TMEM258-202ENST00000535042 ZNF117Q03924 483 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms