RNA–Protein interactions for RNA: ENST00000534382.5

CTSB-231, Transcript of cathepsin B, human

TSL 4

Gene CTSB, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-231	ENST00000534382	AGR2	O95994	175 aa		13.17	□□□□□ -0.3
CTSB-231	ENST00000534382	AK1	P00568	194 aa		13.17	□□□□□ -0.3
CTSB-231	ENST00000534382	GLI4	P10075	376 aa		13.17	□□□□□ -0.3
CTSB-231	ENST00000534382	CPN1	P15169	458 aa		13.17	□□□□□ -0.3
CTSB-231	ENST00000534382	CHM	P24386	653 aa		13.17	□□□□□ -0.3
CTSB-231	ENST00000534382	MSX1	P28360	303 aa		13.17	□□□□□ -0.3
CTSB-231	ENST00000534382	CHI3L1	P36222	383 aa	Predicted RBP	13.17	□□□□□ -0.3
CTSB-231	ENST00000534382	CDKN2C	P42773	168 aa		13.17	□□□□□ -0.3
CTSB-231	ENST00000534382	ZFP36L2	P47974	494 aa	Known RBP	13.17	□□□□□ -0.3
CTSB-231	ENST00000534382	MRPL19	P49406	292 aa	Known RBP	13.17	□□□□□ -0.3
CTSB-231	ENST00000534382	POLR2J	P52435	117 aa	Known RBP	13.17	□□□□□ -0.3
CTSB-231	ENST00000534382	ATP12A	P54707	1039 aa		13.17	□□□□□ -0.3
CTSB-231	ENST00000534382	STX1B	P61266	288 aa		13.17	□□□□□ -0.3
CTSB-231	ENST00000534382	SF3B4	Q15427	424 aa	Known RBP eCLIP	13.17	□□□□□ -0.3	1e-7	■■□□□ 12
CTSB-231	ENST00000534382	CDSN	Q15517	529 aa		13.17	□□□□□ -0.3
CTSB-231	ENST00000534382	DCST1	Q5T197	706 aa		13.17	□□□□□ -0.3
CTSB-231	ENST00000534382	AAGAB	Q6PD74	315 aa		13.17	□□□□□ -0.3
CTSB-231	ENST00000534382	ZNF621	Q6ZSS3	439 aa		13.17	□□□□□ -0.3
CTSB-231	ENST00000534382	MISP	Q8IVT2	679 aa		13.17	□□□□□ -0.3
CTSB-231	ENST00000534382	GATS	Q8NAP1	163 aa		13.17	□□□□□ -0.3
CTSB-231	ENST00000534382	ZNF527	Q8NB42	609 aa		13.17	□□□□□ -0.3
CTSB-231	ENST00000534382	CHDH	Q8NE62	594 aa	Predicted RBP	13.17	□□□□□ -0.3
CTSB-231	ENST00000534382	OR10Q1	Q8NGQ4	319 aa		13.17	□□□□□ -0.3
CTSB-231	ENST00000534382	CA5BP1	Q8WTZ4	195 aa		13.17	□□□□□ -0.3
CTSB-231	ENST00000534382	ASB5	Q8WWX0	329 aa		13.17	□□□□□ -0.3
CTSB-231	ENST00000534382	C1GALT1C1	Q96EU7	318 aa		13.17	□□□□□ -0.3
CTSB-231	ENST00000534382	SFXN2	Q96NB2	322 aa		13.17	□□□□□ -0.3
CTSB-231	ENST00000534382	SDF2	Q99470	211 aa		13.17	□□□□□ -0.3
CTSB-231	ENST00000534382	EXD2	Q9NVH0	621 aa		13.17	□□□□□ -0.3
CTSB-231	ENST00000534382	RNF6	Q9Y252	685 aa		13.17	□□□□□ -0.3
CTSB-231	ENST00000534382	RPH3A	Q9Y2J0	694 aa	Predicted RBP	13.17	□□□□□ -0.3
CTSB-231	ENST00000534382	MED12	Q93074	2177 aa		13.16	□□□□□ -0.3
CTSB-231	ENST00000534382	FAM234B	A2RU67	622 aa		13.16	□□□□□ -0.3
CTSB-231	ENST00000534382	FAM47E-STBD1	D6RA91	191 aa		13.16	□□□□□ -0.3
CTSB-231	ENST00000534382	RFXANK	O14593	260 aa		13.16	□□□□□ -0.3
CTSB-231	ENST00000534382	EDF1	O60869	148 aa	Known RBP	13.16	□□□□□ -0.3
CTSB-231	ENST00000534382	EPPIN	O95925	133 aa		13.16	□□□□□ -0.3
CTSB-231	ENST00000534382	OR12D1	P0DN82	309 aa		13.16	□□□□□ -0.3
CTSB-231	ENST00000534382	HK1	P19367	917 aa		13.16	□□□□□ -0.3
CTSB-231	ENST00000534382	TCEA1	P23193	301 aa	Known RBP	13.16	□□□□□ -0.3
CTSB-231	ENST00000534382	HTR1E	P28566	365 aa		13.16	□□□□□ -0.3
CTSB-231	ENST00000534382	CHRNB4	P30926	498 aa		13.16	□□□□□ -0.3
CTSB-231	ENST00000534382	DCT	P40126	519 aa		13.16	□□□□□ -0.3
CTSB-231	ENST00000534382	STAR	P49675	285 aa		13.16	□□□□□ -0.3
CTSB-231	ENST00000534382	CASP9	P55211	416 aa		13.16	□□□□□ -0.3
CTSB-231	ENST00000534382	B3GALT5-AS1	P59052	145 aa		13.16	□□□□□ -0.3
CTSB-231	ENST00000534382	ZNF630	Q2M218	657 aa	Predicted RBP	13.16	□□□□□ -0.3
CTSB-231	ENST00000534382	ARHGAP11B	Q3KRB8	267 aa		13.16	□□□□□ -0.3
CTSB-231	ENST00000534382	GLYR1	Q49A26	553 aa	Predicted RBP	13.16	□□□□□ -0.3
CTSB-231	ENST00000534382	ACSF3	Q4G176	576 aa	Predicted RBP	13.16	□□□□□ -0.3
CTSB-231	ENST00000534382	FLYWCH1	Q4VC44	716 aa		13.16	□□□□□ -0.3
CTSB-231	ENST00000534382	KLHL26	Q53HC5	615 aa		13.16	□□□□□ -0.3
CTSB-231	ENST00000534382	ATAD3B	Q5T9A4	648 aa		13.16	□□□□□ -0.3
CTSB-231	ENST00000534382	SP5	Q6BEB4	398 aa	Predicted RBP	13.16	□□□□□ -0.3
CTSB-231	ENST00000534382	HEPHL1	Q6MZM0	1159 aa		13.16	□□□□□ -0.3
CTSB-231	ENST00000534382	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	13.16	□□□□□ -0.3
CTSB-231	ENST00000534382	MSANTD1	Q6ZTZ1	278 aa		13.16	□□□□□ -0.3
CTSB-231	ENST00000534382	MTERF4	Q7Z6M4	381 aa	Known RBP	13.16	□□□□□ -0.3
CTSB-231	ENST00000534382	OR9I1	Q8NGQ6	314 aa		13.16	□□□□□ -0.3
CTSB-231	ENST00000534382	XAGE5	Q8WWM1	108 aa		13.16	□□□□□ -0.3
CTSB-231	ENST00000534382	STON2	Q8WXE9	905 aa		13.16	□□□□□ -0.3
CTSB-231	ENST00000534382	RMND5A	Q9H871	391 aa		13.16	□□□□□ -0.3
CTSB-231	ENST00000534382	PHF3	Q92576	2039 aa	Known RBP	13.15	□□□□□ -0.3
CTSB-231	ENST00000534382	NPIPA5	A0A0B4J1W7	369 aa		13.15	□□□□□ -0.3
CTSB-231	ENST00000534382	NPIPA7	E9PJI5	369 aa		13.15	□□□□□ -0.3
CTSB-231	ENST00000534382	NPIPB9	F8W1W9	429 aa		13.15	□□□□□ -0.3
CTSB-231	ENST00000534382	GMFG	O60234	142 aa		13.15	□□□□□ -0.3
CTSB-231	ENST00000534382	GSN	P06396	782 aa		13.15	□□□□□ -0.3
CTSB-231	ENST00000534382	NPIPA8	P0DM63	369 aa		13.15	□□□□□ -0.3
CTSB-231	ENST00000534382	KHK	P50053	298 aa		13.15	□□□□□ -0.3
CTSB-231	ENST00000534382	LHX2	P50458	406 aa		13.15	□□□□□ -0.3
CTSB-231	ENST00000534382	SRY	Q05066	204 aa		13.15	□□□□□ -0.3
CTSB-231	ENST00000534382	CD226	Q15762	336 aa		13.15	□□□□□ -0.3
CTSB-231	ENST00000534382	HSP90B2P	Q58FF3	399 aa		13.15	□□□□□ -0.3
CTSB-231	ENST00000534382	RIPPLY2	Q5TAB7	128 aa		13.15	□□□□□ -0.3
CTSB-231	ENST00000534382	RAET1L	Q5VY80	246 aa		13.15	□□□□□ -0.3
CTSB-231	ENST00000534382	SEM1	Q6ZVN7	128 aa		13.15	□□□□□ -0.3
CTSB-231	ENST00000534382	C16orf62	Q7Z3J2	963 aa		13.15	□□□□□ -0.3
CTSB-231	ENST00000534382	RNF130	Q86XS8	419 aa		13.15	□□□□□ -0.3
CTSB-231	ENST00000534382	CCDC71	Q8IV32	467 aa	Predicted RBP	13.15	□□□□□ -0.3
CTSB-231	ENST00000534382	ARFGAP2	Q8N6H7	521 aa		13.15	□□□□□ -0.3
CTSB-231	ENST00000534382	LILRB4	Q8NHJ6	448 aa		13.15	□□□□□ -0.3
CTSB-231	ENST00000534382	ZPLD1	Q8TCW7	415 aa		13.15	□□□□□ -0.3
CTSB-231	ENST00000534382	THOC1	Q96FV9	657 aa	Known RBP	13.15	□□□□□ -0.3
CTSB-231	ENST00000534382	ITCH	Q96J02	903 aa		13.15	□□□□□ -0.3
CTSB-231	ENST00000534382	PIGQ	Q9BRB3	760 aa		13.15	□□□□□ -0.3
CTSB-231	ENST00000534382	NMUR2	Q9GZQ4	415 aa		13.15	□□□□□ -0.3
CTSB-231	ENST00000534382	CHST11	Q9NPF2	352 aa		13.15	□□□□□ -0.3
CTSB-231	ENST00000534382	UTP20	O75691	2785 aa	Known RBP	13.14	□□□□□ -0.31
CTSB-231	ENST00000534382		A0A0G2JNJ9	132 aa		13.14	□□□□□ -0.31
CTSB-231	ENST00000534382		H3BNH8	94 aa		13.14	□□□□□ -0.31
CTSB-231	ENST00000534382	LINC01387	J3KSC0	135 aa		13.14	□□□□□ -0.31
CTSB-231	ENST00000534382	FCMR	O60667	390 aa		13.14	□□□□□ -0.31
CTSB-231	ENST00000534382	STX11	O75558	287 aa		13.14	□□□□□ -0.31
CTSB-231	ENST00000534382	C1QC	P02747	245 aa		13.14	□□□□□ -0.31
CTSB-231	ENST00000534382	GUSB	P08236	651 aa		13.14	□□□□□ -0.31
CTSB-231	ENST00000534382	ZCCHC18	P0CG32	403 aa		13.14	□□□□□ -0.31
CTSB-231	ENST00000534382	GRN	P28799	593 aa	Known RBP	13.14	□□□□□ -0.31
CTSB-231	ENST00000534382	TIMP3	P35625	211 aa		13.14	□□□□□ -0.31
CTSB-231	ENST00000534382	ADH7	P40394	386 aa		13.14	□□□□□ -0.31

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