RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 OPN3Q9H1Y3 402 aaPredicted RBP8.68□□□□□ -1.02
SSBP3-215ENST00000533946 Q9N2J8 555 aa8.68□□□□□ -1.02
SSBP3-215ENST00000533946 SLC6A13Q9NSD5 602 aa8.68□□□□□ -1.02
SSBP3-215ENST00000533946 ACSS1Q9NUB1 689 aaPredicted RBP8.68□□□□□ -1.02
SSBP3-215ENST00000533946 ZCCHC3Q9NUD5 404 aaKnown RBP8.68□□□□□ -1.02
SSBP3-215ENST00000533946 FAM120CQ9NX05 1096 aaKnown RBP8.68□□□□□ -1.02
SSBP3-215ENST00000533946 MARCOQ9UEW3 520 aaPredicted RBP8.68□□□□□ -1.02
SSBP3-215ENST00000533946 ROS1P08922 2347 aa8.68□□□□□ -1.02
SSBP3-215ENST00000533946 IGLV3-32A0A0A0MS00 114 aa8.67□□□□□ -1.02
SSBP3-215ENST00000533946 A0A0J9YW62 118 aa8.67□□□□□ -1.02
SSBP3-215ENST00000533946 HSPB2A8KAH6 182 aa8.67□□□□□ -1.02
SSBP3-215ENST00000533946 H3BQF6 201 aa8.67□□□□□ -1.02
SSBP3-215ENST00000533946 FCMRO60667 390 aa8.67□□□□□ -1.02
SSBP3-215ENST00000533946 ADAM11O75078 769 aa8.67□□□□□ -1.02
SSBP3-215ENST00000533946 CTAG2O75638 210 aa8.67□□□□□ -1.02
SSBP3-215ENST00000533946 CHEK2O96017 543 aa8.67□□□□□ -1.02
SSBP3-215ENST00000533946 SERPINE1P05121 402 aa8.67□□□□□ -1.02
SSBP3-215ENST00000533946 KITP10721 976 aa8.67□□□□□ -1.02
SSBP3-215ENST00000533946 NEFHP12036 1026 aa8.67□□□□□ -1.02
SSBP3-215ENST00000533946 EDNRAP25101 427 aa8.67□□□□□ -1.02
SSBP3-215ENST00000533946 CTSSP25774 331 aa8.67□□□□□ -1.02
SSBP3-215ENST00000533946 SSTR2P30874 369 aa8.67□□□□□ -1.02
SSBP3-215ENST00000533946 CCKARP32238 428 aa8.67□□□□□ -1.02
SSBP3-215ENST00000533946 KRT20P35900 424 aa8.67□□□□□ -1.02
SSBP3-215ENST00000533946 CDKN2CP42773 168 aa8.67□□□□□ -1.02
SSBP3-215ENST00000533946 KIR2DL2P43627 348 aaPredicted RBP8.67□□□□□ -1.02
SSBP3-215ENST00000533946 GSTM5P46439 218 aa8.67□□□□□ -1.02
SSBP3-215ENST00000533946 CCT3P49368 545 aaKnown RBP8.67□□□□□ -1.02
SSBP3-215ENST00000533946 DSCR4P56555 118 aaPredicted RBP8.67□□□□□ -1.02
SSBP3-215ENST00000533946 NAA20P61599 178 aa8.67□□□□□ -1.02
SSBP3-215ENST00000533946 UFM1P61960 85 aa8.67□□□□□ -1.02
SSBP3-215ENST00000533946 SIRPAP78324 504 aa8.67□□□□□ -1.02
SSBP3-215ENST00000533946 RPP38P78345 283 aaKnown RBP8.67□□□□□ -1.02
SSBP3-215ENST00000533946 PRR5P85299 388 aa8.67□□□□□ -1.02
SSBP3-215ENST00000533946 ZNF117Q03924 483 aa8.67□□□□□ -1.02
SSBP3-215ENST00000533946 TP53BP2Q13625 1128 aa8.67□□□□□ -1.02
SSBP3-215ENST00000533946 HSPB2Q16082 182 aa8.67□□□□□ -1.02
SSBP3-215ENST00000533946 MAPK14Q16539 360 aa8.67□□□□□ -1.02
SSBP3-215ENST00000533946 CTU2Q2VPK5 515 aaKnown RBP8.67□□□□□ -1.02
SSBP3-215ENST00000533946 SLC25A35Q3KQZ1 300 aa8.67□□□□□ -1.02
SSBP3-215ENST00000533946 ATP6AP1LQ52LC2 224 aa8.67□□□□□ -1.02
SSBP3-215ENST00000533946 BEND6Q5SZJ8 279 aaPredicted RBP8.67□□□□□ -1.02
SSBP3-215ENST00000533946 CDC73Q6P1J9 531 aa8.67□□□□□ -1.02
SSBP3-215ENST00000533946 ZNF474Q6S9Z5 364 aaPredicted RBP8.67□□□□□ -1.02
SSBP3-215ENST00000533946 LRIG3Q6UXM1 1119 aa8.67□□□□□ -1.02
SSBP3-215ENST00000533946 CDH24Q86UP0 819 aa8.67□□□□□ -1.02
SSBP3-215ENST00000533946 RAB8BQ92930 207 aa8.67□□□□□ -1.02
SSBP3-215ENST00000533946 DNAJA3Q96EY1 480 aa8.67□□□□□ -1.02
SSBP3-215ENST00000533946 ZBED6CLQ96FA7 236 aaPredicted RBP8.67□□□□□ -1.02
SSBP3-215ENST00000533946 ZNF764Q96H86 408 aaPredicted RBP8.67□□□□□ -1.02
SSBP3-215ENST00000533946 METTL2AQ96IZ6 378 aaKnown RBP8.67□□□□□ -1.02
SSBP3-215ENST00000533946 PPP3R2Q96LZ3 170 aa8.67□□□□□ -1.02
SSBP3-215ENST00000533946 MS4A4EQ96PG1 132 aa8.67□□□□□ -1.02
SSBP3-215ENST00000533946 OR7D2Q96RA2 312 aa8.67□□□□□ -1.02
SSBP3-215ENST00000533946 ZNF559Q9BR84 538 aa8.67□□□□□ -1.02
SSBP3-215ENST00000533946 INPP5KQ9BT40 448 aa8.67□□□□□ -1.02
SSBP3-215ENST00000533946 DUSP26Q9BV47 211 aa8.67□□□□□ -1.02
SSBP3-215ENST00000533946 PINK1Q9BXM7 581 aa8.67□□□□□ -1.02
SSBP3-215ENST00000533946 CALHM2Q9HA72 323 aa8.67□□□□□ -1.02
SSBP3-215ENST00000533946 EML4Q9HC35 981 aaKnown RBP8.67□□□□□ -1.02
SSBP3-215ENST00000533946 GALNT8Q9NY28 637 aa8.67□□□□□ -1.02
SSBP3-215ENST00000533946 MID2Q9UJV3 735 aa8.67□□□□□ -1.02
SSBP3-215ENST00000533946 WBP11Q9Y2W2 641 aaKnown RBP8.67□□□□□ -1.02
SSBP3-215ENST00000533946 PCDHGB3Q9Y5G1 929 aa8.67□□□□□ -1.02
SSBP3-215ENST00000533946 FLNAP21333 2647 aaKnown RBP8.66□□□□□ -1.02
SSBP3-215ENST00000533946 A0A1W2PNV4 684 aa8.66□□□□□ -1.02
SSBP3-215ENST00000533946 TMEM120BA0PK00 339 aa8.66□□□□□ -1.02
SSBP3-215ENST00000533946 FAM221AA4D161 298 aa8.66□□□□□ -1.02
SSBP3-215ENST00000533946 CLDN24A6NM45 220 aa8.66□□□□□ -1.02
SSBP3-215ENST00000533946 ALG1L2C9J202 215 aa8.66□□□□□ -1.02
SSBP3-215ENST00000533946 NPIPB9F8W1W9 429 aa8.66□□□□□ -1.02
SSBP3-215ENST00000533946 ZNF195O14628 629 aa8.66□□□□□ -1.02
SSBP3-215ENST00000533946 HCRTR2O43614 444 aa8.66□□□□□ -1.02
SSBP3-215ENST00000533946 TNFRSF21O75509 655 aa8.66□□□□□ -1.02
SSBP3-215ENST00000533946 RCBTB2O95199 551 aa8.66□□□□□ -1.02
SSBP3-215ENST00000533946 CPSF4O95639 269 aaKnown RBP8.66□□□□□ -1.02
SSBP3-215ENST00000533946 IL2RAP01589 272 aa8.66□□□□□ -1.02
SSBP3-215ENST00000533946 ALOX5P09917 674 aa8.66□□□□□ -1.02
SSBP3-215ENST00000533946 PEPDP12955 493 aa8.66□□□□□ -1.02
SSBP3-215ENST00000533946 TBXA2RP21731 343 aa8.66□□□□□ -1.02
SSBP3-215ENST00000533946 DNAJA1P31689 397 aaKnown RBP8.66□□□□□ -1.02
SSBP3-215ENST00000533946 HPCAL1P37235 193 aa8.66□□□□□ -1.02
SSBP3-215ENST00000533946 KIR2DL3P43628 341 aa8.66□□□□□ -1.02
SSBP3-215ENST00000533946 ASMTP46597 345 aa8.66□□□□□ -1.02
SSBP3-215ENST00000533946 ASCL1P50553 236 aa8.66□□□□□ -1.02
SSBP3-215ENST00000533946 CLDN8P56748 225 aa8.66□□□□□ -1.02
SSBP3-215ENST00000533946 MAGOHP61326 146 aaKnown RBP8.66□□□□□ -1.02
SSBP3-215ENST00000533946 EMX2Q04743 252 aa8.66□□□□□ -1.02
SSBP3-215ENST00000533946 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.66□□□□□ -1.02
SSBP3-215ENST00000533946 SLC9B1Q4ZJI4 515 aa8.66□□□□□ -1.02
SSBP3-215ENST00000533946 SPANXN4Q5MJ08 99 aa8.66□□□□□ -1.02
SSBP3-215ENST00000533946 ANKRD34AQ69YU3 496 aa8.66□□□□□ -1.02
SSBP3-215ENST00000533946 TMEM200AQ86VY9 491 aa8.66□□□□□ -1.02
SSBP3-215ENST00000533946 WDR75Q8IWA0 830 aaKnown RBP8.66□□□□□ -1.02
SSBP3-215ENST00000533946 EID3Q8N140 333 aa8.66□□□□□ -1.02
SSBP3-215ENST00000533946 COX18Q8N8Q8 333 aa8.66□□□□□ -1.02
SSBP3-215ENST00000533946 CDRT4Q8N9R6 151 aa8.66□□□□□ -1.02
SSBP3-215ENST00000533946 PSMA8Q8TAA3 256 aa8.66□□□□□ -1.02
SSBP3-215ENST00000533946 OR5P2Q8WZ92 322 aa8.66□□□□□ -1.02
SSBP3-215ENST00000533946 RNASE6Q93091 150 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms