RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 TLN2Q9Y4G6 2542 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 C15orf38-AP3S2A0A0A6YYH1 394 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 A0A1W2PPR1 153 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 CASKO14936 926 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 B4GALT2O60909 372 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 PDE5AO76074 875 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 IL2RAP01589 272 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 ABCB1P08183 1280 aaPredicted RBP10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 ZCCHC18P0CG32 403 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 HOXB9P17482 250 aaPredicted RBP10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 CEACAM8P31997 349 aaPredicted RBP10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 TIMP3P35625 211 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 FEN1P39748 380 aaKnown RBP10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 FRKP42685 505 aaPredicted RBP10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 XKP51811 444 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 HBA1P69905 142 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 SELPLGQ14242 412 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 PIGGQ5H8A4 983 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 RABL3Q5HYI8 236 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 OR52E8Q6IFG1 317 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 HEPHL1Q6MZM0 1159 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 SEM1Q6ZVN7 128 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 ARPINQ7Z6K5 226 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 OR4N5Q8IXE1 308 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 RNF148Q8N7C7 305 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 APCDD1LQ8NCL9 501 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 NAXEQ8NCW5 288 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 TNIP2Q8NFZ5 429 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 OR4K14Q8NGD5 310 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 OR8J3Q8NGG0 315 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 ASB15Q8WXK1 588 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 ZBED6CLQ96FA7 236 aaPredicted RBP10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 PERPQ96FX8 193 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 ZNF681Q96N22 645 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 AMDHD1Q96NU7 426 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 CCL19Q99731 98 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 SH3GL1Q99961 368 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 THUMPD3Q9BV44 507 aaKnown RBP10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 GLIPR2Q9H4G4 154 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 GIMAP4Q9NUV9 329 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 TAS2R9Q9NYW1 312 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 CD300AQ9UGN4 299 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 ZNF780BQ9Y6R6 833 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 MXRA5Q9NR99 2828 aa10.32□□□□□ -0.76
TRAPPC4-213ENST00000533149 MYOCOSA0A1B0GUC4 107 aa10.32□□□□□ -0.76
TRAPPC4-213ENST00000533149 A0A1W2PS29 197 aa10.32□□□□□ -0.76
TRAPPC4-213ENST00000533149 TCRBV16S1A1N1A0A5B0 115 aa10.32□□□□□ -0.76
TRAPPC4-213ENST00000533149 MBD3L4A6NDZ8 208 aaPredicted RBP10.32□□□□□ -0.76
TRAPPC4-213ENST00000533149 MBD3L5A6NJ08 208 aaPredicted RBP10.32□□□□□ -0.76
TRAPPC4-213ENST00000533149 AHRRA9YTQ3 701 aa10.32□□□□□ -0.76
TRAPPC4-213ENST00000533149 NME4O00746 187 aa10.32□□□□□ -0.76
TRAPPC4-213ENST00000533149 GPR75O95800 540 aa10.32□□□□□ -0.76
TRAPPC4-213ENST00000533149 EPPINO95925 133 aa10.32□□□□□ -0.76
TRAPPC4-213ENST00000533149 ME2P23368 584 aa10.32□□□□□ -0.76
TRAPPC4-213ENST00000533149 NTSP30990 170 aa10.32□□□□□ -0.76
TRAPPC4-213ENST00000533149 MPIP34949 423 aa10.32□□□□□ -0.76
TRAPPC4-213ENST00000533149 MSX2P35548 267 aaPredicted RBP10.32□□□□□ -0.76
TRAPPC4-213ENST00000533149 NCBP2P52298 156 aaKnown RBP eCLIP10.32□□□□□ -0.76
TRAPPC4-213ENST00000533149 EEFSECP57772 596 aaKnown RBP10.32□□□□□ -0.76
TRAPPC4-213ENST00000533149 MTPNP58546 118 aa10.32□□□□□ -0.76
TRAPPC4-213ENST00000533149 ID2Q02363 134 aa10.32□□□□□ -0.76
TRAPPC4-213ENST00000533149 DUSP2Q05923 314 aa10.32□□□□□ -0.76
TRAPPC4-213ENST00000533149 MLC1Q15049 377 aa10.32□□□□□ -0.76
TRAPPC4-213ENST00000533149 SAMD4BQ5PRF9 694 aaKnown RBP10.32□□□□□ -0.76
TRAPPC4-213ENST00000533149 POMZP3Q6PJE2 187 aa10.32□□□□□ -0.76
TRAPPC4-213ENST00000533149 IL20RBQ6UXL0 311 aa10.32□□□□□ -0.76
TRAPPC4-213ENST00000533149 LACC1Q8IV20 430 aa10.32□□□□□ -0.76
TRAPPC4-213ENST00000533149 CCDC116Q8IYX3 515 aa10.32□□□□□ -0.76
TRAPPC4-213ENST00000533149 SAMD14Q8IZD0 417 aaPredicted RBP10.32□□□□□ -0.76
TRAPPC4-213ENST00000533149 CLEC4FQ8N1N0 589 aa10.32□□□□□ -0.76
TRAPPC4-213ENST00000533149 ZFP28Q8NHY6 868 aa10.32□□□□□ -0.76
TRAPPC4-213ENST00000533149 ANKRD9Q96BM1 317 aaPredicted RBP10.32□□□□□ -0.76
TRAPPC4-213ENST00000533149 VMP1Q96GC9 406 aa10.32□□□□□ -0.76
TRAPPC4-213ENST00000533149 AURKBQ96GD4 344 aaPredicted RBP10.32□□□□□ -0.76
TRAPPC4-213ENST00000533149 CPPED1Q9BRF8 314 aaPredicted RBP10.32□□□□□ -0.76
TRAPPC4-213ENST00000533149 CXorf36Q9H7Y0 433 aa10.32□□□□□ -0.76
TRAPPC4-213ENST00000533149 GMPR2Q9P2T1 348 aaKnown RBP10.32□□□□□ -0.76
TRAPPC4-213ENST00000533149 SPRR3Q9UBC9 169 aa10.32□□□□□ -0.76
TRAPPC4-213ENST00000533149 ABCD2Q9UBJ2 740 aa10.32□□□□□ -0.76
TRAPPC4-213ENST00000533149 SLC7A8Q9UHI5 535 aa10.32□□□□□ -0.76
TRAPPC4-213ENST00000533149 A0A0G2JMM0 328 aa10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 A0A1W2PPB8 328 aa10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 A0A1W2PRS3 328 aa10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 PRORSD1PA6NEY8 169 aa10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 KIR3DP1A8MWS1 328 aa10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 EVPLLA8MZ36 301 aa10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 G3V3Y1 287 aa10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 CLIC1O00299 241 aa10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 PHF1O43189 567 aaPredicted RBP10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 WIPF1O43516 503 aa10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 FGF17O60258 216 aa10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 CTNSO60931 367 aa10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 LDB3O75112 727 aa10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 CIB2O75838 187 aa10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 OR2J2O76002 312 aa10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 ZFAND5O76080 213 aa10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 C1QCP02747 245 aa10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 CELA3AP09093 270 aa10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 PORP16435 677 aaPredicted RBP10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 UQCRC2P22695 453 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms