RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 NCCRP1Q6ZVX7 275 aaPredicted RBP11.51□□□□□ -0.57
CCDC90B-216ENST00000529856 MRGPRGQ86SM5 289 aa11.51□□□□□ -0.57
CCDC90B-216ENST00000529856 RNF130Q86XS8 419 aa11.51□□□□□ -0.57
CCDC90B-216ENST00000529856 MARVELD2Q8N4S9 558 aa11.51□□□□□ -0.57
CCDC90B-216ENST00000529856 ZNF808Q8N4W9 903 aaPredicted RBP11.51□□□□□ -0.57
CCDC90B-216ENST00000529856 ZFP90Q8TF47 636 aa11.51□□□□□ -0.57
CCDC90B-216ENST00000529856 XAGE5Q8WWM1 108 aa11.51□□□□□ -0.57
CCDC90B-216ENST00000529856 GTF2H4Q92759 462 aa11.51□□□□□ -0.57
CCDC90B-216ENST00000529856 ABTB1Q969K4 478 aaPredicted RBP11.51□□□□□ -0.57
CCDC90B-216ENST00000529856 UGT2B28Q9BY64 529 aa11.51□□□□□ -0.57
CCDC90B-216ENST00000529856 PTGES2Q9H7Z7 377 aa11.51□□□□□ -0.57
CCDC90B-216ENST00000529856 SLC52A3Q9NQ40 469 aa11.51□□□□□ -0.57
CCDC90B-216ENST00000529856 SLC6A13Q9NSD5 602 aa11.51□□□□□ -0.57
CCDC90B-216ENST00000529856 FGFR1OP2Q9NVK5 253 aa11.51□□□□□ -0.57
CCDC90B-216ENST00000529856 DKKL1Q9UK85 242 aa11.51□□□□□ -0.57
CCDC90B-216ENST00000529856 NCOA6Q14686 2063 aaPredicted RBP11.51□□□□□ -0.57
CCDC90B-216ENST00000529856 USP9YO00507 2555 aaPredicted RBP11.51□□□□□ -0.57
CCDC90B-216ENST00000529856 PCNX1Q96RV3 2341 aa11.51□□□□□ -0.57
CCDC90B-216ENST00000529856 DOPEY1Q5JWR5 2465 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 PHF3Q92576 2039 aaKnown RBP11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 ICE1Q9Y2F5 2266 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 NPIPA5A0A0B4J1W7 369 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 A0A0G2JND7 137 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 AHRRA9YTQ3 701 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 NPIPA7E9PJI5 369 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 FCMRO60667 390 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 STX11O75558 287 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 ANP32DO95626 131 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 KRT75O95678 551 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 CLDN1O95832 211 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 GUSBP08236 651 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 VIMP08670 466 aaKnown RBP11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 NPIPA8P0DM63 369 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 GABRA1P14867 456 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 NCF2P19878 526 aaPredicted RBP11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 AGAP20933 346 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 CHMP24386 653 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 MSX1P28360 303 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 GCKP35557 465 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 DCTP40126 519 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 MDH1P40925 334 aaKnown RBP11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 KHKP50053 298 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 SMSP52788 366 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 RCAN2Q14206 197 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 GANABQ14697 944 aaKnown RBP11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 FLYWCH1Q4VC44 716 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 AGKQ53H12 422 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 DCST1Q5T197 706 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 ATAD3BQ5T9A4 648 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 METTL21CQ5VZV1 264 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 RTL6Q6ICC9 239 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 XKRXQ6PP77 449 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 C16orf62Q7Z3J2 963 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 MTERF4Q7Z6M4 381 aaKnown RBP11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 IFNEQ86WN2 208 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 MISPQ8IVT2 679 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 PM20D2Q8IYS1 436 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 ULK2Q8IYT8 1036 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 RPRMLQ8N4K4 120 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 GATSQ8NAP1 163 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 ZNF527Q8NB42 609 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 RAB8BQ92930 207 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 SPDL1Q96EA4 605 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 C1GALT1C1Q96EU7 318 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 WDYHV1Q96HA8 205 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 PRDM14Q9GZV8 571 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 RABEP2Q9H5N1 569 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 ZNF385DQ9H6B1 395 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 ALKBH4Q9NXW9 302 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 CCDC167Q9P0B6 97 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 TRIM33Q9UPN9 1127 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 FAM215AQ9Y5M1 114 aa11.5□□□□□ -0.57
CCDC90B-216ENST00000529856 ASH1LQ9NR48 2969 aaKnown RBP11.49□□□□□ -0.57
CCDC90B-216ENST00000529856 A1L4Q6 167 aa11.49□□□□□ -0.57
CCDC90B-216ENST00000529856 PRAMEF27A3QJZ7 478 aa11.49□□□□□ -0.57
CCDC90B-216ENST00000529856 HMGN4O00479 90 aa11.49□□□□□ -0.57
CCDC90B-216ENST00000529856 NR5A2O00482 541 aa11.49□□□□□ -0.57
CCDC90B-216ENST00000529856 TROVE2P10155 538 aaKnown RBP eCLIP11.49□□□□□ -0.57
CCDC90B-216ENST00000529856 CPN1P15169 458 aa11.49□□□□□ -0.57
CCDC90B-216ENST00000529856 CD1EP15812 388 aa11.49□□□□□ -0.57
CCDC90B-216ENST00000529856 HK1P19367 917 aa11.49□□□□□ -0.57
CCDC90B-216ENST00000529856 PTGER4P35408 488 aa11.49□□□□□ -0.57
CCDC90B-216ENST00000529856 MAGEA8P43361 318 aa11.49□□□□□ -0.57
CCDC90B-216ENST00000529856 ANXA11P50995 505 aaKnown RBP11.49□□□□□ -0.57
CCDC90B-216ENST00000529856 MVDP53602 400 aa11.49□□□□□ -0.57
CCDC90B-216ENST00000529856 B3GALT5-AS1P59052 145 aa11.49□□□□□ -0.57
CCDC90B-216ENST00000529856 PMPCAQ10713 525 aa11.49□□□□□ -0.57
CCDC90B-216ENST00000529856 FUT5Q11128 374 aa11.49□□□□□ -0.57
CCDC90B-216ENST00000529856 GPR68Q15743 365 aa11.49□□□□□ -0.57
CCDC90B-216ENST00000529856 CD226Q15762 336 aa11.49□□□□□ -0.57
CCDC90B-216ENST00000529856 ZNF141Q15928 474 aa11.49□□□□□ -0.57
CCDC90B-216ENST00000529856 GLYR1Q49A26 553 aaPredicted RBP11.49□□□□□ -0.57
CCDC90B-216ENST00000529856 COX20Q5RI15 118 aa11.49□□□□□ -0.57
CCDC90B-216ENST00000529856 C6orf10Q5SRN2 563 aa11.49□□□□□ -0.57
CCDC90B-216ENST00000529856 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.49□□□□□ -0.57
CCDC90B-216ENST00000529856 C1orf185Q5T7R7 199 aa11.49□□□□□ -0.57
CCDC90B-216ENST00000529856 AAGABQ6PD74 315 aa11.49□□□□□ -0.57
CCDC90B-216ENST00000529856 SLC2A7Q6PXP3 512 aa11.49□□□□□ -0.57
CCDC90B-216ENST00000529856 ENPP6Q6UWR7 440 aa11.49□□□□□ -0.57
CCDC90B-216ENST00000529856 B3GNT6Q6ZMB0 384 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms