RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 IGHG3P01860 377 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 S100A9P06702 114 aaKnown RBP3□□□□□ -1.93
AMBRA1-208ENST00000529558 TPM1P09493 284 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 RHOXF2BP0C7M4 288 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 ACADSP16219 412 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 UCP1P25874 307 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 FCGR2CP31995 323 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 FDFT1P37268 417 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 CDKN1BP46527 198 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 SLC11A1P49279 550 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 DUSP3P51452 185 aaPredicted RBP3□□□□□ -1.93
AMBRA1-208ENST00000529558 NOVA1P51513 510 aaKnown RBP3□□□□□ -1.93
AMBRA1-208ENST00000529558 ATP1B3P54709 279 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 PAX9P55771 341 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 CARD18P57730 90 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 ERVK-16P61578 105 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 OGDHQ02218 1023 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 BDH1Q02338 343 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 ZNF85Q03923 595 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 MERTKQ12866 999 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 EIF2B1Q14232 305 aaKnown RBP3□□□□□ -1.93
AMBRA1-208ENST00000529558 GK3PQ14409 553 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 MTF1Q14872 753 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 KNOP1Q1ED39 458 aaKnown RBP3□□□□□ -1.93
AMBRA1-208ENST00000529558 SLC5A12Q1EHB4 618 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 KLHL40Q2TBA0 621 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 ALKBH6Q3KRA9 238 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 FAM76BQ5HYJ3 339 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 BEND3Q5T5X7 828 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 PIP5KL1Q5T9C9 394 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 SLX4IPQ5VYV7 408 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 ACSM5Q6NUN0 579 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 SCYL2Q6P3W7 929 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 PRSS57Q6UWY2 283 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 STAC2Q6ZMT1 411 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 C9orf47Q6ZRZ4 202 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 CENPQQ7L2Z9 268 aaPredicted RBP3□□□□□ -1.93
AMBRA1-208ENST00000529558 TSEN54Q7Z6J9 526 aaKnown RBP3□□□□□ -1.93
AMBRA1-208ENST00000529558 CCDC50Q8IVM0 306 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 KATNAL2Q8IYT4 538 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 ZSCAN4Q8NAM6 433 aaPredicted RBP3□□□□□ -1.93
AMBRA1-208ENST00000529558 FAM83FQ8NEG4 500 aaPredicted RBP3□□□□□ -1.93
AMBRA1-208ENST00000529558 AENQ8WTP8 325 aaKnown RBP3□□□□□ -1.93
AMBRA1-208ENST00000529558 BIRC7Q96CA5 298 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 TM4SF19Q96DZ7 209 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 DNAJA3Q96EY1 480 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 SDSLQ96GA7 329 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 ZNF479Q96JC4 524 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 NSMCE3Q96MG7 304 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 CCT8L2Q96SF2 557 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 FAM173AQ9BQD7 235 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 RHOXF2Q9BQY4 288 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 CENPKQ9BS16 269 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 TMEM204Q9BSN7 226 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 NXF5Q9H1B4 397 aaKnown RBP3□□□□□ -1.93
AMBRA1-208ENST00000529558 SUDS3Q9H7L9 328 aaPredicted RBP3□□□□□ -1.93
AMBRA1-208ENST00000529558 GEMIN7Q9H840 131 aaKnown RBP3□□□□□ -1.93
AMBRA1-208ENST00000529558 ANKRA2Q9H9E1 313 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 IL1RAPQ9NPH3 570 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 ZDHHC18Q9NUE0 388 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 KLHL28Q9NXS3 571 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 SIGLEC8Q9NYZ4 499 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 GCNT4Q9P109 453 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 CIDEBQ9UHD4 219 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 ICAM5Q9UMF0 924 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 PACSIN2Q9UNF0 486 aaPredicted RBP3□□□□□ -1.93
AMBRA1-208ENST00000529558 ABCG2Q9UNQ0 655 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 TRAF3IP3Q9Y228 551 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 RASD1Q9Y272 281 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 CSDC2Q9Y534 153 aaKnown RBP3□□□□□ -1.93
AMBRA1-208ENST00000529558 COL3A1P02461 1466 aaPredicted RBP3□□□□□ -1.93
AMBRA1-208ENST00000529558 VPS8Q8N3P4 1428 aa3□□□□□ -1.93
AMBRA1-208ENST00000529558 PRG4Q92954 1404 aaPredicted RBP3□□□□□ -1.93
AMBRA1-208ENST00000529558 UGGT2Q9NYU1 1516 aa2.99□□□□□ -1.93
AMBRA1-208ENST00000529558 IGHV4-4A0A075B6R2 117 aa2.99□□□□□ -1.93
AMBRA1-208ENST00000529558 TRBV5-4A0A0C4DH59 114 aa2.99□□□□□ -1.93
AMBRA1-208ENST00000529558 A0A0G2JLW4 131 aa2.99□□□□□ -1.93
AMBRA1-208ENST00000529558 PLSCR5A0PG75 271 aa2.99□□□□□ -1.93
AMBRA1-208ENST00000529558 ZNF840PA6NDX5 716 aa2.99□□□□□ -1.93
AMBRA1-208ENST00000529558 DNAJC9-AS1A6NH13 148 aa2.99□□□□□ -1.93
AMBRA1-208ENST00000529558 RNF212BA8MTL3 300 aa2.99□□□□□ -1.93
AMBRA1-208ENST00000529558 SMIM1B2RUZ4 78 aa2.99□□□□□ -1.93
AMBRA1-208ENST00000529558 SUPT3HB4E1H0 165 aa2.99□□□□□ -1.93
AMBRA1-208ENST00000529558 POLR2DO15514 142 aaKnown RBP2.99□□□□□ -1.93
AMBRA1-208ENST00000529558 TYROBPO43914 113 aa2.99□□□□□ -1.93
AMBRA1-208ENST00000529558 RAMP1O60894 148 aa2.99□□□□□ -1.93
AMBRA1-208ENST00000529558 FTH1P02794 183 aa2.99□□□□□ -1.93
AMBRA1-208ENST00000529558 SLPIP03973 132 aa2.99□□□□□ -1.93
AMBRA1-208ENST00000529558 NGFRP08138 427 aa2.99□□□□□ -1.93
AMBRA1-208ENST00000529558 ALOX5P09917 674 aa2.99□□□□□ -1.93
AMBRA1-208ENST00000529558 MCF2P10911 925 aa2.99□□□□□ -1.93
AMBRA1-208ENST00000529558 ATP1B2P14415 290 aaPredicted RBP2.99□□□□□ -1.93
AMBRA1-208ENST00000529558 SELEP16581 610 aa2.99□□□□□ -1.93
AMBRA1-208ENST00000529558 IMPDH1P20839 514 aa2.99□□□□□ -1.93
AMBRA1-208ENST00000529558 ATP5C1P36542 298 aaKnown RBP2.99□□□□□ -1.93
AMBRA1-208ENST00000529558 RPL4P36578 427 aaKnown RBP2.99□□□□□ -1.93
AMBRA1-208ENST00000529558 RPL13AP40429 203 aaKnown RBP2.99□□□□□ -1.93
AMBRA1-208ENST00000529558 CRYBB2P43320 205 aa2.99□□□□□ -1.93
AMBRA1-208ENST00000529558 TSFMP43897 325 aaKnown RBP2.99□□□□□ -1.93
AMBRA1-208ENST00000529558 CD151P48509 253 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms