RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 FXYD6P3P58550 94 aa10.86□□□□□ -0.67
LINC01001-201ENST00000526704 BTN3A2P78410 334 aa10.86□□□□□ -0.67
LINC01001-201ENST00000526704 SF3A2Q15428 464 aaKnown RBP10.86□□□□□ -0.67
LINC01001-201ENST00000526704 C2orf27AQ580R0 203 aa10.86□□□□□ -0.67
LINC01001-201ENST00000526704 CDC73Q6P1J9 531 aa10.86□□□□□ -0.67
LINC01001-201ENST00000526704 NIPAL3Q6P499 406 aa10.86□□□□□ -0.67
LINC01001-201ENST00000526704 KCT2Q8NC54 265 aa10.86□□□□□ -0.67
LINC01001-201ENST00000526704 SRFBP1Q8NEF9 429 aaKnown RBP10.86□□□□□ -0.67
LINC01001-201ENST00000526704 UBQLN3Q9H347 655 aa10.86□□□□□ -0.67
LINC01001-201ENST00000526704 TRIM45Q9H8W5 580 aaPredicted RBP10.86□□□□□ -0.67
LINC01001-201ENST00000526704 TMA7Q9Y2S6 64 aaKnown RBP10.86□□□□□ -0.67
LINC01001-201ENST00000526704 LOC102723532A0A0G2JNH3 316 aa10.86□□□□□ -0.67
LINC01001-201ENST00000526704 FAM240BA0A1B0GVZ2 78 aa10.86□□□□□ -0.67
LINC01001-201ENST00000526704 A0A1W2PP55 124 aa10.86□□□□□ -0.67
LINC01001-201ENST00000526704 GSAPA4D1B5 854 aa10.86□□□□□ -0.67
LINC01001-201ENST00000526704 HRO43593 1189 aa10.86□□□□□ -0.67
LINC01001-201ENST00000526704 SLC19A2O60779 497 aa10.86□□□□□ -0.67
LINC01001-201ENST00000526704 HMGN1P05114 100 aa10.86□□□□□ -0.67
LINC01001-201ENST00000526704 FUT1P19526 365 aa10.86□□□□□ -0.67
LINC01001-201ENST00000526704 GALP22466 123 aa10.86□□□□□ -0.67
LINC01001-201ENST00000526704 ATP6V1E1P36543 226 aa10.86□□□□□ -0.67
LINC01001-201ENST00000526704 GALK2Q01415 458 aa10.86□□□□□ -0.67
LINC01001-201ENST00000526704 PDGFRLQ15198 375 aa10.86□□□□□ -0.67
LINC01001-201ENST00000526704 RPE65Q16518 533 aa10.86□□□□□ -0.67
LINC01001-201ENST00000526704 TIGD3Q6B0B8 471 aa10.86□□□□□ -0.67
LINC01001-201ENST00000526704 PLBD1Q6P4A8 553 aa10.86□□□□□ -0.67
LINC01001-201ENST00000526704 VN1R4Q7Z5H5 301 aa10.86□□□□□ -0.67
LINC01001-201ENST00000526704 FANCMQ8IYD8 2048 aa10.86□□□□□ -0.67
LINC01001-201ENST00000526704 HDDC3Q8N4P3 179 aa10.86□□□□□ -0.67
LINC01001-201ENST00000526704 TMEM99Q8N816 258 aa10.86□□□□□ -0.67
LINC01001-201ENST00000526704 ZFAND1Q8TCF1 268 aa10.86□□□□□ -0.67
LINC01001-201ENST00000526704 SMARCD2Q92925 531 aa10.86□□□□□ -0.67
LINC01001-201ENST00000526704 OTULINQ96BN8 352 aa10.86□□□□□ -0.67
LINC01001-201ENST00000526704 PRSS27Q9BQR3 290 aa10.86□□□□□ -0.67
LINC01001-201ENST00000526704 MARVELD1Q9BSK0 173 aa10.86□□□□□ -0.67
LINC01001-201ENST00000526704 RSPH9Q9H1X1 276 aaPredicted RBP10.86□□□□□ -0.67
LINC01001-201ENST00000526704 SYNDIG1Q9H7V2 258 aa10.86□□□□□ -0.67
LINC01001-201ENST00000526704 MED20Q9H944 212 aa10.86□□□□□ -0.67
LINC01001-201ENST00000526704 NLGN3Q9NZ94 848 aa10.86□□□□□ -0.67
LINC01001-201ENST00000526704 NTMQ9P121 344 aa10.86□□□□□ -0.67
LINC01001-201ENST00000526704 SLC17A4Q9Y2C5 497 aa10.86□□□□□ -0.67
LINC01001-201ENST00000526704 DOCK8Q8NF50 2099 aa10.86□□□□□ -0.67
LINC01001-201ENST00000526704 C12orf71A8MTZ7 269 aa10.85□□□□□ -0.67
LINC01001-201ENST00000526704 ISM1B1AKI9 464 aa10.85□□□□□ -0.67
LINC01001-201ENST00000526704 FAM25AB3EWG3 89 aa10.85□□□□□ -0.67
LINC01001-201ENST00000526704 FAM25CB3EWG5 89 aa10.85□□□□□ -0.67
LINC01001-201ENST00000526704 FAM25GB3EWG6 89 aa10.85□□□□□ -0.67
LINC01001-201ENST00000526704 RNGTTO60942 597 aaKnown RBP10.85□□□□□ -0.67
LINC01001-201ENST00000526704 ZNF888P0CJ79 500 aaPredicted RBP10.85□□□□□ -0.67
LINC01001-201ENST00000526704 PRKCAP17252 672 aa10.85□□□□□ -0.67
LINC01001-201ENST00000526704 CMPK1P30085 196 aa10.85□□□□□ -0.67
LINC01001-201ENST00000526704 STXBP1P61764 594 aaKnown RBP10.85□□□□□ -0.67
LINC01001-201ENST00000526704 EEF1A1P68104 462 aaKnown RBP10.85□□□□□ -0.67
LINC01001-201ENST00000526704 BDH1Q02338 343 aa10.85□□□□□ -0.67
LINC01001-201ENST00000526704 DBPQ10586 325 aaPredicted RBP10.85□□□□□ -0.67
LINC01001-201ENST00000526704 FAPQ12884 760 aa10.85□□□□□ -0.67
LINC01001-201ENST00000526704 TJAP1Q5JTD0 557 aa10.85□□□□□ -0.67
LINC01001-201ENST00000526704 WDR88Q6ZMY6 472 aa10.85□□□□□ -0.67
LINC01001-201ENST00000526704 GID4Q8IVV7 300 aa10.85□□□□□ -0.67
LINC01001-201ENST00000526704 LRRC25Q8N386 305 aaPredicted RBP10.85□□□□□ -0.67
LINC01001-201ENST00000526704 FANK1Q8TC84 345 aa10.85□□□□□ -0.67
LINC01001-201ENST00000526704 BRIX1Q8TDN6 353 aaKnown RBP10.85□□□□□ -0.67
LINC01001-201ENST00000526704 ALG8Q9BVK2 526 aa10.85□□□□□ -0.67
LINC01001-201ENST00000526704 OR52D1Q9H346 318 aa10.85□□□□□ -0.67
LINC01001-201ENST00000526704 MOSPD1Q9UJG1 213 aa10.85□□□□□ -0.67
LINC01001-201ENST00000526704 ZNF223Q9UK11 482 aaPredicted RBP10.85□□□□□ -0.67
LINC01001-201ENST00000526704 ADAM30Q9UKF2 790 aa10.85□□□□□ -0.67
LINC01001-201ENST00000526704 WDR45Q9Y484 360 aa10.85□□□□□ -0.67
LINC01001-201ENST00000526704 GPSM3Q9Y4H4 160 aa10.85□□□□□ -0.67
LINC01001-201ENST00000526704 KIAA0100Q14667 2235 aaKnown RBP10.85□□□□□ -0.67
LINC01001-201ENST00000526704 A0A0G2JMP0 313 aa10.85□□□□□ -0.67
LINC01001-201ENST00000526704 A0A0X1KG70 313 aa10.85□□□□□ -0.67
LINC01001-201ENST00000526704 PRR23AA6NEV1 266 aa10.85□□□□□ -0.67
LINC01001-201ENST00000526704 UNC119BA6NIH7 251 aa10.85□□□□□ -0.67
LINC01001-201ENST00000526704 SLC43A1O75387 559 aa10.85□□□□□ -0.67
LINC01001-201ENST00000526704 HTR2AP28223 471 aa10.85□□□□□ -0.67
LINC01001-201ENST00000526704 ERP29P30040 261 aaKnown RBP10.85□□□□□ -0.67
LINC01001-201ENST00000526704 MTNR1BP49286 362 aa10.85□□□□□ -0.67
LINC01001-201ENST00000526704 GZMKP49863 264 aa10.85□□□□□ -0.67
LINC01001-201ENST00000526704 AGFG1P52594 562 aaKnown RBP10.85□□□□□ -0.67
LINC01001-201ENST00000526704 TNFRSF17Q02223 184 aa10.85□□□□□ -0.67
LINC01001-201ENST00000526704 CSTF1Q05048 431 aaKnown RBP10.85□□□□□ -0.67
LINC01001-201ENST00000526704 ADAM15Q13444 863 aa10.85□□□□□ -0.67
LINC01001-201ENST00000526704 DUSP5Q16690 384 aa10.85□□□□□ -0.67
LINC01001-201ENST00000526704 ARHGAP11BQ3KRB8 267 aa10.85□□□□□ -0.67
LINC01001-201ENST00000526704 SYCE2Q6PIF2 218 aa10.85□□□□□ -0.67
LINC01001-201ENST00000526704 PAQR7Q86WK9 346 aa10.85□□□□□ -0.67
LINC01001-201ENST00000526704 OR4M2Q8NGB6 313 aa10.85□□□□□ -0.67
LINC01001-201ENST00000526704 KISS1RQ969F8 398 aaPredicted RBP10.85□□□□□ -0.67
LINC01001-201ENST00000526704 GAL3ST3Q96A11 431 aa10.85□□□□□ -0.67
LINC01001-201ENST00000526704 ART5Q96L15 291 aa10.85□□□□□ -0.67
LINC01001-201ENST00000526704 HCAR1Q9BXC0 346 aa10.85□□□□□ -0.67
LINC01001-201ENST00000526704 DPH1Q9BZG8 443 aa10.85□□□□□ -0.67
LINC01001-201ENST00000526704 ENKD1Q9H0I2 346 aa10.85□□□□□ -0.67
LINC01001-201ENST00000526704 PPIL3Q9H2H8 161 aaKnown RBP10.85□□□□□ -0.67
LINC01001-201ENST00000526704 MTHFD2LQ9H903 347 aaPredicted RBP10.85□□□□□ -0.67
LINC01001-201ENST00000526704 H2AFY2Q9P0M6 372 aaPredicted RBP10.85□□□□□ -0.67
LINC01001-201ENST00000526704 EXTL2Q9UBQ6 330 aa10.85□□□□□ -0.67
LINC01001-201ENST00000526704 STON1Q9Y6Q2 735 aa10.85□□□□□ -0.67
LINC01001-201ENST00000526704 DUXAA6NLW8 204 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms