RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 BTKQ06187 659 aa12.74□□□□□ -0.37
CPSF1-201ENST00000526271 IFFO1Q0D2I5 559 aa12.74□□□□□ -0.37
CPSF1-201ENST00000526271 GANABQ14697 944 aaKnown RBP12.74□□□□□ -0.37
CPSF1-201ENST00000526271 TSNAXIP1Q2TAA8 658 aa12.74□□□□□ -0.37
CPSF1-201ENST00000526271 WFDC8Q8IUA0 241 aa12.74□□□□□ -0.37
CPSF1-201ENST00000526271 PHC2Q8IXK0 858 aa12.74□□□□□ -0.37
CPSF1-201ENST00000526271 RIBC1Q8N443 379 aaPredicted RBP12.74□□□□□ -0.37
CPSF1-201ENST00000526271 OR6K3Q8NGY3 331 aa12.74□□□□□ -0.37
CPSF1-201ENST00000526271 OR4C3Q8NH37 302 aa12.74□□□□□ -0.37
CPSF1-201ENST00000526271 OR10D3Q8NH80 312 aa12.74□□□□□ -0.37
CPSF1-201ENST00000526271 NANOS1Q8WY41 292 aaKnown RBP12.74□□□□□ -0.37
CPSF1-201ENST00000526271 AKAP1Q92667 903 aaKnown RBP eCLIP12.74□□□□□ -0.37
CPSF1-201ENST00000526271 ELP4Q96EB1 424 aa12.74□□□□□ -0.37
CPSF1-201ENST00000526271 GIMAP5Q96F15 307 aa12.74□□□□□ -0.37
CPSF1-201ENST00000526271 EGLN2Q96KS0 407 aa12.74□□□□□ -0.37
CPSF1-201ENST00000526271 AMDHD1Q96NU7 426 aa12.74□□□□□ -0.37
CPSF1-201ENST00000526271 GSTO2Q9H4Y5 243 aa12.74□□□□□ -0.37
CPSF1-201ENST00000526271 TAS2R9Q9NYW1 312 aa12.74□□□□□ -0.37
CPSF1-201ENST00000526271 TAS2R7Q9NYW3 318 aa12.74□□□□□ -0.37
CPSF1-201ENST00000526271 LGALS13Q9UHV8 139 aa12.74□□□□□ -0.37
CPSF1-201ENST00000526271 VDAC3Q9Y277 283 aa12.74□□□□□ -0.37
CPSF1-201ENST00000526271 CCL27Q9Y4X3 112 aa12.74□□□□□ -0.37
CPSF1-201ENST00000526271 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.73□□□□□ -0.373e-9■■■■□ 19.5
CPSF1-201ENST00000526271 GNG14A0A1W2PPG7 69 aa12.73□□□□□ -0.37
CPSF1-201ENST00000526271 EIF1AYO14602 144 aaKnown RBP12.73□□□□□ -0.37
CPSF1-201ENST00000526271 ADAMDEC1O15204 470 aa12.73□□□□□ -0.37
CPSF1-201ENST00000526271 OIP5O43482 229 aa12.73□□□□□ -0.37
CPSF1-201ENST00000526271 CXCL13O43927 109 aa12.73□□□□□ -0.37
CPSF1-201ENST00000526271 SUPT7LO94864 414 aa12.73□□□□□ -0.37
CPSF1-201ENST00000526271 EIF1AXP47813 144 aaKnown RBP12.73□□□□□ -0.37
CPSF1-201ENST00000526271 NCBP2P52298 156 aaKnown RBP eCLIP12.73□□□□□ -0.37
CPSF1-201ENST00000526271 PPP2R2BQ00005 443 aa12.73□□□□□ -0.37
CPSF1-201ENST00000526271 GLYR1Q49A26 553 aaPredicted RBP12.73□□□□□ -0.37
CPSF1-201ENST00000526271 ZNF385BQ569K4 471 aa12.73□□□□□ -0.37
CPSF1-201ENST00000526271 EXOSC6Q5RKV6 272 aaKnown RBP12.73□□□□□ -0.37
CPSF1-201ENST00000526271 GPRIN3Q6ZVF9 776 aa12.73□□□□□ -0.37
CPSF1-201ENST00000526271 CHMP1BQ7LBR1 199 aa12.73□□□□□ -0.37
CPSF1-201ENST00000526271 ZNF551Q7Z340 670 aaPredicted RBP12.73□□□□□ -0.37
CPSF1-201ENST00000526271 HDXQ7Z353 690 aa12.73□□□□□ -0.37
CPSF1-201ENST00000526271 METTL6Q8TCB7 284 aa12.73□□□□□ -0.37
CPSF1-201ENST00000526271 TMEM171Q8WVE6 324 aa12.73□□□□□ -0.37
CPSF1-201ENST00000526271 SLC9A6Q92581 669 aa12.73□□□□□ -0.37
CPSF1-201ENST00000526271 ACTR6Q9GZN1 396 aa12.73□□□□□ -0.37
CPSF1-201ENST00000526271 STMN4Q9H169 189 aaPredicted RBP12.73□□□□□ -0.37
CPSF1-201ENST00000526271 VIPAS39Q9H9C1 493 aa12.73□□□□□ -0.37
CPSF1-201ENST00000526271 EMCNQ9ULC0 261 aa12.73□□□□□ -0.37
CPSF1-201ENST00000526271 LAMP3Q9UQV4 416 aa12.73□□□□□ -0.37
CPSF1-201ENST00000526271 A0A1W2PRB8 838 aa12.72□□□□□ -0.37
CPSF1-201ENST00000526271 TLDC2A0PJX2 215 aa12.72□□□□□ -0.37
CPSF1-201ENST00000526271 SERTM1A2A2V5 107 aa12.72□□□□□ -0.37
CPSF1-201ENST00000526271 NPIPB8E9PQR5 432 aa12.72□□□□□ -0.37
CPSF1-201ENST00000526271 ULK1O75385 1050 aa12.72□□□□□ -0.37
CPSF1-201ENST00000526271 CD8AP01732 235 aa12.72□□□□□ -0.37
CPSF1-201ENST00000526271 KRT6AP02538 564 aa12.72□□□□□ -0.37
CPSF1-201ENST00000526271 KRT6BP04259 564 aa12.72□□□□□ -0.37
CPSF1-201ENST00000526271 ANXA4P09525 319 aaPredicted RBP12.72□□□□□ -0.37
CPSF1-201ENST00000526271 ACP2P11117 423 aa12.72□□□□□ -0.37
CPSF1-201ENST00000526271 PSMB1P20618 241 aaKnown RBP12.72□□□□□ -0.37
CPSF1-201ENST00000526271 AGTR1P30556 359 aa12.72□□□□□ -0.37
CPSF1-201ENST00000526271 KRT20P35900 424 aa12.72□□□□□ -0.37
CPSF1-201ENST00000526271 RFX3P48380 749 aa12.72□□□□□ -0.37
CPSF1-201ENST00000526271 KRT6CP48668 564 aa12.72□□□□□ -0.37
CPSF1-201ENST00000526271 EEFSECP57772 596 aaKnown RBP12.72□□□□□ -0.37
CPSF1-201ENST00000526271 MRPS22P82650 360 aaKnown RBP12.72□□□□□ -0.37
CPSF1-201ENST00000526271 ACSM2AQ08AH3 577 aa12.72□□□□□ -0.37
CPSF1-201ENST00000526271 C2orf80Q0P641 193 aa12.72□□□□□ -0.37
CPSF1-201ENST00000526271 KIAA0040Q15053 153 aa12.72□□□□□ -0.37
CPSF1-201ENST00000526271 CD226Q15762 336 aa12.72□□□□□ -0.37
CPSF1-201ENST00000526271 PGGHGQ32M88 737 aa12.72□□□□□ -0.37
CPSF1-201ENST00000526271 PLPPR5Q32ZL2 321 aa12.72□□□□□ -0.37
CPSF1-201ENST00000526271 TNFAIP8L3Q5GJ75 292 aa12.72□□□□□ -0.37
CPSF1-201ENST00000526271 ACSM2BQ68CK6 577 aa12.72□□□□□ -0.37
CPSF1-201ENST00000526271 ADAM5Q6NVV9 412 aa12.72□□□□□ -0.37
CPSF1-201ENST00000526271 NUFIP2Q7Z417 695 aaKnown RBP12.72□□□□□ -0.37
CPSF1-201ENST00000526271 CROCCP2Q86T23 111 aa12.72□□□□□ -0.37
CPSF1-201ENST00000526271 GABRG1Q8N1C3 465 aa12.72□□□□□ -0.37
CPSF1-201ENST00000526271 GATSQ8NAP1 163 aa12.72□□□□□ -0.37
CPSF1-201ENST00000526271 FAM110BQ8TC76 370 aa12.72□□□□□ -0.37
CPSF1-201ENST00000526271 S100PBPQ96BU1 408 aa12.72□□□□□ -0.37
CPSF1-201ENST00000526271 GMPPAQ96IJ6 420 aaPredicted RBP12.72□□□□□ -0.37
CPSF1-201ENST00000526271 SRXN1Q9BYN0 137 aa12.72□□□□□ -0.37
CPSF1-201ENST00000526271 TMEM185BQ9H7F4 350 aa12.72□□□□□ -0.37
CPSF1-201ENST00000526271 MED17Q9NVC6 651 aa12.72□□□□□ -0.37
CPSF1-201ENST00000526271 TBK1Q9UHD2 729 aa12.72□□□□□ -0.37
CPSF1-201ENST00000526271 ING1Q9UK53 422 aaPredicted RBP12.72□□□□□ -0.37
CPSF1-201ENST00000526271 POLR3HQ9Y535 204 aaPredicted RBP12.72□□□□□ -0.37
CPSF1-201ENST00000526271 PTGDR2Q9Y5Y4 395 aa12.72□□□□□ -0.37
CPSF1-201ENST00000526271 MALRD1Q5VYJ5 2156 aa12.71□□□□□ -0.37
CPSF1-201ENST00000526271 SMIM23A6NLE4 172 aa12.71□□□□□ -0.37
CPSF1-201ENST00000526271 ALG1L2C9J202 215 aa12.71□□□□□ -0.37
CPSF1-201ENST00000526271 LINC01387J3KSC0 135 aa12.71□□□□□ -0.37
CPSF1-201ENST00000526271 TNFSF11O14788 317 aa12.71□□□□□ -0.37
CPSF1-201ENST00000526271 COQ9O75208 318 aa12.71□□□□□ -0.37
CPSF1-201ENST00000526271 NKX2-2O95096 273 aa12.71□□□□□ -0.37
CPSF1-201ENST00000526271 OXSR1O95747 527 aaPredicted RBP12.71□□□□□ -0.37
CPSF1-201ENST00000526271 IGHV4-39P01824 125 aa12.71□□□□□ -0.37
CPSF1-201ENST00000526271 IMPDH1P20839 514 aa12.71□□□□□ -0.37
CPSF1-201ENST00000526271 GABRA3P34903 492 aa12.71□□□□□ -0.37
CPSF1-201ENST00000526271 MPIP34949 423 aa12.71□□□□□ -0.37
CPSF1-201ENST00000526271 CDKN1AP38936 164 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms