RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 SDF2Q99470 211 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 VKORC1Q9BQB6 163 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 PIGQQ9BRB3 760 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 OR2B2Q9GZK3 357 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 NMUR2Q9GZQ4 415 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 ZNF350Q9GZX5 532 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 FAM107BQ9H098 131 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 UBQLN3Q9H347 655 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 DSN1Q9H410 356 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 ARMC7Q9H6L4 198 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 TPT1P8Q9HAU6 139 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 PROK2Q9HC23 129 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 PLSCR2Q9NRY7 297 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 ALKBH4Q9NXW9 302 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 FLRT3Q9NZU0 649 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 FBXL2Q9UKC9 423 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 CAMK2AQ9UQM7 478 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 RPH3AQ9Y2J0 694 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 ZNF835Q9Y2P0 537 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 NDUFAF1Q9Y375 327 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 MRPS18CQ9Y3D5 142 aaKnown RBP4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 DTNAQ9Y4J8 743 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 LIPGQ9Y5X9 500 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 CAPN7Q9Y6W3 813 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 DOCK10Q96BY6 2186 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 ATMQ13315 3056 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 IGLV3-32A0A0A0MS00 114 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 SERINC4A6NH21 518 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 BBIP1A8MTZ0 92 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 AHRRA9YTQ3 701 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 CLIC1O00299 241 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 HMGN4O00479 90 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 SLC22A2O15244 555 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 ZNF264O43296 627 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 KIAA0513O60268 411 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 EIF4E2O60573 245 aaKnown RBP4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 SEMA7AO75326 666 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 CYP7B1O75881 506 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 H6PDO95479 791 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 CSTAP01040 98 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 BCHEP06276 602 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 GUSBP08236 651 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 PEPDP12955 493 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 ETFAP13804 333 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 ZNF17P17021 662 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 CAPN3P20807 821 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 TCEA1P23193 301 aaKnown RBP4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 CHMP24386 653 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 ADSLP30566 484 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 EIF1P41567 113 aaKnown RBP4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 CDKN2CP42773 168 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 GAS1P54826 345 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 RPS3AP61247 264 aaKnown RBP4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 GNGT1P63211 74 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 SF3A3Q12874 501 aaKnown RBP eCLIP4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 CBFBQ13951 182 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 CYLC2Q14093 348 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 LARS2Q15031 903 aaKnown RBP4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 ZNF141Q15928 474 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 CYP51A1Q16850 503 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 GLYR1Q49A26 553 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 GXYLT1Q4G148 440 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 LIN52Q52LA3 116 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 KLHL26Q53HC5 615 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 EIPR1Q53HC9 387 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 NHSL2Q5HYW2 709 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 EXOSC6Q5RKV6 272 aaKnown RBP4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 PDZK1Q5T2W1 519 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 GCNT6Q5T4J0 391 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 FNDC7Q5VTL7 733 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 HEPHL1Q6MZM0 1159 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 XKRXQ6PP77 449 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 B3GNT6Q6ZMB0 384 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 C3P1Q6ZMU1 363 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 LRRC74BQ6ZQY2 392 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 SPATA21Q7Z572 469 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 DHDDSQ86SQ9 333 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 KRT73Q86Y46 540 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 DOLPP1Q86YN1 238 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 CMIPQ8IY22 773 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 ZNF808Q8N4W9 903 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 FADS6Q8N9I5 356 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 WDSUB1Q8N9V3 476 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 PCYOX1LQ8NBM8 494 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 OR10Q1Q8NGQ4 319 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 ZFP90Q8TF47 636 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 RNF138Q8WVD3 245 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 ASB5Q8WWX0 329 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 TMEM234Q8WY98 164 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 RND1Q92730 232 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 GTF2H4Q92759 462 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 PMM1Q92871 262 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 ZBTB8AQ96BR9 441 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 C1GALT1C1Q96EU7 318 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 LRRC46Q96FV0 321 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 PHF12Q96QT6 1004 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 SH3GL1Q99961 368 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 THUMPD3Q9BV44 507 aaKnown RBP4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 SERHL2Q9H4I8 314 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms