RNA–Protein interactions for RNA: ENST00000515006.5

COPB2-213, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 5

Gene COPB2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-213ENST00000515006 CT55Q8WUE5 264 aa5.51□□□□□ -1.53
COPB2-213ENST00000515006 DNAJA4Q8WW22 397 aaPredicted RBP5.51□□□□□ -1.53
COPB2-213ENST00000515006 SLC38A4Q969I6 547 aa5.51□□□□□ -1.53
COPB2-213ENST00000515006 MPP4Q96JB8 637 aa5.51□□□□□ -1.53
COPB2-213ENST00000515006 IMMP1LQ96LU5 166 aa5.51□□□□□ -1.53
COPB2-213ENST00000515006 PRRC1Q96M27 445 aa5.51□□□□□ -1.53
COPB2-213ENST00000515006 SECISBP2Q96T21 854 aaKnown RBP5.51□□□□□ -1.53
COPB2-213ENST00000515006 ARHGDIGQ99819 225 aa5.51□□□□□ -1.53
COPB2-213ENST00000515006 CIB1Q99828 191 aa5.51□□□□□ -1.53
COPB2-213ENST00000515006 OCSTAMPQ9BR26 566 aa5.51□□□□□ -1.53
COPB2-213ENST00000515006 TACO1Q9BSH4 297 aaKnown RBP5.51□□□□□ -1.53
COPB2-213ENST00000515006 TEX12Q9BXU0 123 aa5.51□□□□□ -1.53
COPB2-213ENST00000515006 ITPAQ9BY32 194 aa5.51□□□□□ -1.53
COPB2-213ENST00000515006 TBL1XR1Q9BZK7 514 aa5.51□□□□□ -1.53
COPB2-213ENST00000515006 AMBRA1Q9C0C7 1298 aa5.51□□□□□ -1.53
COPB2-213ENST00000515006 NXF5Q9H1B4 397 aaKnown RBP5.51□□□□□ -1.53
COPB2-213ENST00000515006 TSPAN10Q9H1Z9 355 aaPredicted RBP5.51□□□□□ -1.53
COPB2-213ENST00000515006 COQ10BQ9H8M1 238 aa5.51□□□□□ -1.53
COPB2-213ENST00000515006 NMNAT1Q9HAN9 279 aaPredicted RBP5.51□□□□□ -1.53
COPB2-213ENST00000515006 EXOSC3Q9NQT5 275 aaKnown RBP5.51□□□□□ -1.53
COPB2-213ENST00000515006 SMPD3Q9NY59 655 aaPredicted RBP5.51□□□□□ -1.53
COPB2-213ENST00000515006 USE1Q9NZ43 259 aa5.51□□□□□ -1.53
COPB2-213ENST00000515006 ABI3Q9P2A4 366 aa5.51□□□□□ -1.53
COPB2-213ENST00000515006 KIF17Q9P2E2 1029 aa5.51□□□□□ -1.53
COPB2-213ENST00000515006 MYOTQ9UBF9 498 aa5.51□□□□□ -1.53
COPB2-213ENST00000515006 RPS6KB2Q9UBS0 482 aa5.51□□□□□ -1.53
COPB2-213ENST00000515006 TESQ9UGI8 421 aaKnown RBP5.51□□□□□ -1.53
COPB2-213ENST00000515006 ACAD8Q9UKU7 415 aa5.51□□□□□ -1.53
COPB2-213ENST00000515006 ABCG2Q9UNQ0 655 aa5.51□□□□□ -1.53
COPB2-213ENST00000515006 MGAT4BQ9UQ53 548 aa5.51□□□□□ -1.53
COPB2-213ENST00000515006 YARS2Q9Y2Z4 477 aaKnown RBP5.51□□□□□ -1.53
COPB2-213ENST00000515006 PCDHGB6Q9Y5F9 930 aa5.51□□□□□ -1.53
COPB2-213ENST00000515006 NPFFR2Q9Y5X5 522 aa5.51□□□□□ -1.53
COPB2-213ENST00000515006 KMT2EQ8IZD2 1858 aa5.51□□□□□ -1.53
COPB2-213ENST00000515006 TMEM131Q92545 1883 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 SDK1Q7Z5N4 2213 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 CABIN1Q9Y6J0 2220 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 TRBV11-1A0A0K0K1C0 115 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 GXYLT2A0PJZ3 443 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 FAM149AA5PLN7 773 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 TRAPPC13A5PLN9 417 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 SAC3D1A6NKF1 404 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 CDRT15L2A8MXV6 281 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 ALG1L2C9J202 215 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 NPIPB9F8W1W9 429 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 HRKO00198 91 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 FAAHO00519 579 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 DENRO43583 198 aaKnown RBP5.5□□□□□ -1.53
COPB2-213ENST00000515006 GFRA3O60609 400 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 TSPAN2O60636 221 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 UGT2B11O75310 529 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 PPM1BO75688 479 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 CYP7B1O75881 506 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 SEC24DO94855 1032 aaPredicted RBP5.5□□□□□ -1.53
COPB2-213ENST00000515006 CCNB2O95067 398 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 UTS2O95399 124 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 CSTAP01040 98 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 CLPSP04118 112 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 SERPINA7P05543 415 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 UMODP07911 640 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 LINGO3P0C6S8 592 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 PNMTP11086 282 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 GSTM3P21266 225 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 FKBP2P26885 142 aaKnown RBP5.5□□□□□ -1.53
COPB2-213ENST00000515006 ABCD3P28288 659 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 PEX2P28328 305 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 MAP2K6P52564 334 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 CRYBA2P53672 197 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 EEF1A1P68104 462 aaKnown RBP5.5□□□□□ -1.53
COPB2-213ENST00000515006 FUT5Q11128 374 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 SNTA1Q13424 505 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 IL18R1Q13478 541 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 DAG1Q14118 895 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 FGFBP1Q14512 234 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 PUM1Q14671 1186 aaKnown RBP eCLIP5.5□□□□□ -1.539e-7■□□□□ 9.3
COPB2-213ENST00000515006 RTP5Q14D33 572 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 PCOLCEQ15113 449 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 MICAQ29983 383 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 KLHL26Q53HC5 615 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 OTUD3Q5T2D3 398 aaPredicted RBP5.5□□□□□ -1.53
COPB2-213ENST00000515006 MRPL2Q5T653 305 aaKnown RBP5.5□□□□□ -1.53
COPB2-213ENST00000515006 LPCAT4Q643R3 524 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 LCN10Q6JVE6 187 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 HMBOX1Q6NT76 420 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 TMEM81Q6P7N7 255 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 ULK3Q6PHR2 472 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 KIRREL2Q6UWL6 708 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 NPSR1Q6W5P4 371 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 DEF8Q6ZN54 512 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 PLEKHM3Q6ZWE6 761 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 TIPARPQ7Z3E1 657 aaKnown RBP5.5□□□□□ -1.53
COPB2-213ENST00000515006 WDR53Q7Z5U6 358 aaPredicted RBP5.5□□□□□ -1.53
COPB2-213ENST00000515006 RPS19BP1Q86WX3 136 aaKnown RBP5.5□□□□□ -1.53
COPB2-213ENST00000515006 VRK2Q86Y07 508 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 C9orf40Q8IXQ3 194 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 OFCC1Q8IZS5 231 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 ARMC10Q8N2F6 343 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 ZNF614Q8N883 585 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 LSMEM1Q8N8F7 131 aa5.5□□□□□ -1.53
COPB2-213ENST00000515006 ZNF441Q8N8Z8 693 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms