RNA–Protein interactions for RNA: ENST00000510951.5

NR1I3-227, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 774 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-227ENST00000510951 MAGEA8P43361 318 aa9.5□□□□□ -0.89
NR1I3-227ENST00000510951 CLK3P49761 638 aaKnown RBP9.5□□□□□ -0.89
NR1I3-227ENST00000510951 CRISP3P54108 245 aa9.5□□□□□ -0.89
NR1I3-227ENST00000510951 ATP12AP54707 1039 aa9.5□□□□□ -0.89
NR1I3-227ENST00000510951 MXRA7P84157 204 aa9.5□□□□□ -0.89
NR1I3-227ENST00000510951 SCARB2Q14108 478 aa9.5□□□□□ -0.89
NR1I3-227ENST00000510951 TOMM20Q15388 145 aa9.5□□□□□ -0.89
NR1I3-227ENST00000510951 FNDC7Q5VTL7 733 aa9.5□□□□□ -0.89
NR1I3-227ENST00000510951 FAM91A1Q658Y4 838 aa9.5□□□□□ -0.89
NR1I3-227ENST00000510951 TMEM81Q6P7N7 255 aa9.5□□□□□ -0.89
NR1I3-227ENST00000510951 SLC22A16Q86VW1 577 aa9.5□□□□□ -0.89
NR1I3-227ENST00000510951 TMEM251Q8N6I4 163 aa9.5□□□□□ -0.89
NR1I3-227ENST00000510951 WDSUB1Q8N9V3 476 aa9.5□□□□□ -0.89
NR1I3-227ENST00000510951 ZNF527Q8NB42 609 aa9.5□□□□□ -0.89
NR1I3-227ENST00000510951 OR4K17Q8NGC6 315 aa9.5□□□□□ -0.89
NR1I3-227ENST00000510951 OR8J3Q8NGG0 315 aa9.5□□□□□ -0.89
NR1I3-227ENST00000510951 OR1J4Q8NGS1 313 aa9.5□□□□□ -0.89
NR1I3-227ENST00000510951 FBXO27Q8NI29 283 aa9.5□□□□□ -0.89
NR1I3-227ENST00000510951 PHOSPHO1Q8TCT1 267 aa9.5□□□□□ -0.89
NR1I3-227ENST00000510951 FAR1Q8WVX9 515 aa9.5□□□□□ -0.89
NR1I3-227ENST00000510951 NR4A3Q92570 626 aa9.5□□□□□ -0.89
NR1I3-227ENST00000510951 ARSGQ96EG1 525 aa9.5□□□□□ -0.89
NR1I3-227ENST00000510951 SH3YL1Q96HL8 342 aaPredicted RBP9.5□□□□□ -0.89
NR1I3-227ENST00000510951 TMEM41AQ96HV5 264 aa9.5□□□□□ -0.89
NR1I3-227ENST00000510951 GNRHR2Q96P88 292 aa9.5□□□□□ -0.89
NR1I3-227ENST00000510951 DEFB127Q9H1M4 99 aa9.5□□□□□ -0.89
NR1I3-227ENST00000510951 SLC38A1Q9H2H9 487 aa9.5□□□□□ -0.89
NR1I3-227ENST00000510951 EFCAB1Q9HAE3 211 aa9.5□□□□□ -0.89
NR1I3-227ENST00000510951 ZFP64Q9NPA5 681 aa9.5□□□□□ -0.89
NR1I3-227ENST00000510951 AGPAT4Q9NRZ5 378 aa9.5□□□□□ -0.89
NR1I3-227ENST00000510951 B4GALT7Q9UBV7 327 aa9.5□□□□□ -0.89
NR1I3-227ENST00000510951 KCNE5Q9UJ90 142 aa9.5□□□□□ -0.89
NR1I3-227ENST00000510951 FBXL2Q9UKC9 423 aa9.5□□□□□ -0.89
NR1I3-227ENST00000510951 NPIPA1Q9UND3 350 aa9.5□□□□□ -0.89
NR1I3-227ENST00000510951 USP22Q9UPT9 525 aa9.5□□□□□ -0.89
NR1I3-227ENST00000510951 C15orf41Q9Y2V0 281 aa9.5□□□□□ -0.89
NR1I3-227ENST00000510951 LIPGQ9Y5X9 500 aa9.5□□□□□ -0.89
NR1I3-227ENST00000510951 SPENQ96T58 3664 aaKnown RBP9.5□□□□□ -0.89
NR1I3-227ENST00000510951 CCT8L1PA6NM43 557 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 CLDN24A6NM45 220 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 ALG1L2C9J202 215 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 NPIPB9F8W1W9 429 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 PYCARD-AS1I3L0S3 204 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 ZNHIT1O43257 154 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 OIP5O43482 229 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 UGT2B17O75795 530 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 CYP7B1O75881 506 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 PDE9AO76083 593 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 NPPAP01160 153 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 NGFRP08138 427 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 SLC6A2P23975 617 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 ELAVL4P26378 380 aaKnown RBP9.49□□□□□ -0.89
NR1I3-227ENST00000510951 CCR4P51679 360 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 SLC7A2P52569 658 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 CBX1P83916 185 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 CDK6Q00534 326 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 HSF1Q00613 529 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 C19orf57Q0VDD7 668 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 KRT72Q14CN4 511 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 ADRM1Q16186 407 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 MAPK14Q16539 360 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 ZNF324BQ6AW86 544 aaPredicted RBP9.49□□□□□ -0.89
NR1I3-227ENST00000510951 TIGD3Q6B0B8 471 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 LRRC74BQ6ZQY2 392 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 TRPM8Q7Z2W7 1104 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 PTOV1Q86YD1 416 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 SPPL2CQ8IUH8 684 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 SIAH3Q8IW03 269 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 ZZZ3Q8IYH5 903 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 FAM109AQ8N4B1 249 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 TMCO5AQ8N6Q1 288 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 DUSP19Q8WTR2 217 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 ZG16BQ96DA0 208 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 SH3GL1Q99961 368 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 TREX2Q9BQ50 279 aaPredicted RBP9.49□□□□□ -0.89
NR1I3-227ENST00000510951 ECSITQ9BQ95 431 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 HOXD1Q9GZZ0 328 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 SLC6A15Q9H2J7 730 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 KAT8Q9H7Z6 458 aaKnown RBP9.49□□□□□ -0.89
NR1I3-227ENST00000510951 POLE3Q9NRF9 147 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 SDHAF3Q9NRP4 125 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 CMTM6Q9NX76 183 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 THUMPD1Q9NXG2 353 aaKnown RBP9.49□□□□□ -0.89
NR1I3-227ENST00000510951 CALML5Q9NZT1 146 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 MED11Q9P086 117 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 GMPR2Q9P2T1 348 aaKnown RBP9.49□□□□□ -0.89
NR1I3-227ENST00000510951 DKKL1Q9UK85 242 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 ANGPT4Q9Y264 503 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 L3MBTL1Q9Y468 752 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 DTNAQ9Y4J8 743 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 GMEB1Q9Y692 573 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 MPDZO75970 2070 aa9.49□□□□□ -0.89
NR1I3-227ENST00000510951 RP1L1Q8IWN7 2480 aaPredicted RBP9.48□□□□□ -0.89
NR1I3-227ENST00000510951 PRRC2CQ9Y520 2896 aaKnown RBP9.48□□□□□ -0.89
NR1I3-227ENST00000510951 C15orf38-AP3S2A0A0A6YYH1 394 aa9.48□□□□□ -0.89
NR1I3-227ENST00000510951 A0A1W2PQD3 144 aa9.48□□□□□ -0.89
NR1I3-227ENST00000510951 SERINC4A6NH21 518 aa9.48□□□□□ -0.89
NR1I3-227ENST00000510951 H3BNH8 94 aa9.48□□□□□ -0.89
NR1I3-227ENST00000510951 GTPBP1O00178 669 aaKnown RBP9.48□□□□□ -0.89
NR1I3-227ENST00000510951 HCRTR2O43614 444 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms