RNA–Protein interactions for RNA: ENST00000508387.5

NR1I3-225, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 634 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-225ENST00000508387 OPN3Q9H1Y3 402 aaPredicted RBP11.55□□□□□ -0.56
NR1I3-225ENST00000508387 SERHL2Q9H4I8 314 aa11.55□□□□□ -0.56
NR1I3-225ENST00000508387 TMEM185BQ9H7F4 350 aa11.55□□□□□ -0.56
NR1I3-225ENST00000508387 C3orf14Q9HBI5 128 aa11.55□□□□□ -0.56
NR1I3-225ENST00000508387 CCM2LQ9NUG4 571 aaPredicted RBP11.55□□□□□ -0.56
NR1I3-225ENST00000508387 PLEKHA6Q9Y2H5 1048 aa11.55□□□□□ -0.56
NR1I3-225ENST00000508387 TMEM114B3SHH9 223 aa11.54□□□□□ -0.56
NR1I3-225ENST00000508387 ALG1L2C9J202 215 aa11.54□□□□□ -0.56
NR1I3-225ENST00000508387 RGS16O15492 202 aaPredicted RBP11.54□□□□□ -0.56
NR1I3-225ENST00000508387 CTIFO43310 598 aaKnown RBP11.54□□□□□ -0.56
NR1I3-225ENST00000508387 ZNF500O60304 480 aaPredicted RBP11.54□□□□□ -0.56
NR1I3-225ENST00000508387 SMNDC1O75940 238 aaKnown RBP eCLIP11.54□□□□□ -0.56
NR1I3-225ENST00000508387 AQP8O94778 261 aa11.54□□□□□ -0.56
NR1I3-225ENST00000508387 HSPA4LO95757 839 aa11.54□□□□□ -0.56
NR1I3-225ENST00000508387 C1QCP02747 245 aa11.54□□□□□ -0.56
NR1I3-225ENST00000508387 PEPDP12955 493 aa11.54□□□□□ -0.56
NR1I3-225ENST00000508387 IL11P20809 199 aa11.54□□□□□ -0.56
NR1I3-225ENST00000508387 MAPK1P28482 360 aa11.54□□□□□ -0.56
NR1I3-225ENST00000508387 CCKARP32238 428 aa11.54□□□□□ -0.56
NR1I3-225ENST00000508387 SLC6A8P48029 635 aa11.54□□□□□ -0.56
NR1I3-225ENST00000508387 PRIM2P49643 509 aa11.54□□□□□ -0.56
NR1I3-225ENST00000508387 PSMD4P55036 377 aaKnown RBP11.54□□□□□ -0.56
NR1I3-225ENST00000508387 CASP9P55211 416 aa11.54□□□□□ -0.56
NR1I3-225ENST00000508387 TP53BP2Q13625 1128 aa11.54□□□□□ -0.56
NR1I3-225ENST00000508387 MLC1Q15049 377 aa11.54□□□□□ -0.56
NR1I3-225ENST00000508387 PON3Q15166 354 aa11.54□□□□□ -0.56
NR1I3-225ENST00000508387 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.54□□□□□ -0.56
NR1I3-225ENST00000508387 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.54□□□□□ -0.56
NR1I3-225ENST00000508387 R3HCC1LQ7Z5L2 792 aaKnown RBP11.54□□□□□ -0.56
NR1I3-225ENST00000508387 BTLAQ7Z6A9 289 aa11.54□□□□□ -0.56
NR1I3-225ENST00000508387 MEIOBQ8N635 442 aa11.54□□□□□ -0.56
NR1I3-225ENST00000508387 CNEP1R1Q8N9A8 125 aa11.54□□□□□ -0.56
NR1I3-225ENST00000508387 CEP70Q8NHQ1 597 aa11.54□□□□□ -0.56
NR1I3-225ENST00000508387 POC1BQ8TC44 478 aa11.54□□□□□ -0.56
NR1I3-225ENST00000508387 FAM222BQ8WU58 562 aa11.54□□□□□ -0.56
NR1I3-225ENST00000508387 ZNF524Q96C55 264 aa11.54□□□□□ -0.56
NR1I3-225ENST00000508387 STARD4Q96DR4 205 aa11.54□□□□□ -0.56
NR1I3-225ENST00000508387 CENPHQ9H3R5 247 aa11.54□□□□□ -0.56
NR1I3-225ENST00000508387 PTGES2Q9H7Z7 377 aa11.54□□□□□ -0.56
NR1I3-225ENST00000508387 SDHAF3Q9NRP4 125 aa11.54□□□□□ -0.56
NR1I3-225ENST00000508387 GPATCH2Q9NW75 528 aa11.54□□□□□ -0.56
NR1I3-225ENST00000508387 ST6GALNAC2Q9UJ37 374 aa11.54□□□□□ -0.56
NR1I3-225ENST00000508387 MRTO4Q9UKD2 239 aaKnown RBP11.54□□□□□ -0.56
NR1I3-225ENST00000508387 PACSIN3Q9UKS6 424 aa11.54□□□□□ -0.56
NR1I3-225ENST00000508387 CENPVL1A0A0U1RR11 272 aa11.53□□□□□ -0.56
NR1I3-225ENST00000508387 SIAH2O43255 324 aa11.53□□□□□ -0.56
NR1I3-225ENST00000508387 NDUFB5O43674 189 aa11.53□□□□□ -0.56
NR1I3-225ENST00000508387 SERPINE1P05121 402 aa11.53□□□□□ -0.56
NR1I3-225ENST00000508387 DHRS4L1P0CG22 281 aa11.53□□□□□ -0.56
NR1I3-225ENST00000508387 TBXA2RP21731 343 aa11.53□□□□□ -0.56
NR1I3-225ENST00000508387 SHC1P29353 583 aa11.53□□□□□ -0.56
NR1I3-225ENST00000508387 SOAT1P35610 550 aa11.53□□□□□ -0.56
NR1I3-225ENST00000508387 SERPINB5P36952 375 aa11.53□□□□□ -0.56
NR1I3-225ENST00000508387 KIR2DL2P43627 348 aaPredicted RBP11.53□□□□□ -0.56
NR1I3-225ENST00000508387 CLK3P49761 638 aaKnown RBP11.53□□□□□ -0.56
NR1I3-225ENST00000508387 DIO3P55073 304 aa11.53□□□□□ -0.56
NR1I3-225ENST00000508387 ABCE1P61221 599 aaKnown RBP11.53□□□□□ -0.56
NR1I3-225ENST00000508387 HBA1P69905 142 aa11.53□□□□□ -0.56
NR1I3-225ENST00000508387 POU6F2P78424 691 aaPredicted RBP11.53□□□□□ -0.56
NR1I3-225ENST00000508387 ZNF117Q03924 483 aa11.53□□□□□ -0.56
NR1I3-225ENST00000508387 FAM27E3Q08E93 113 aa11.53□□□□□ -0.56
NR1I3-225ENST00000508387 C17orf67Q0P5P2 114 aa11.53□□□□□ -0.56
NR1I3-225ENST00000508387 BCL2A1Q16548 175 aa11.53□□□□□ -0.56
NR1I3-225ENST00000508387 CTU2Q2VPK5 515 aaKnown RBP11.53□□□□□ -0.56
NR1I3-225ENST00000508387 PLPPR5Q32ZL2 321 aa11.53□□□□□ -0.56
NR1I3-225ENST00000508387 VPS26BQ4G0F5 336 aa11.53□□□□□ -0.56
NR1I3-225ENST00000508387 CEP85LQ5SZL2 805 aa11.53□□□□□ -0.56
NR1I3-225ENST00000508387 CPTPQ5TA50 214 aa11.53□□□□□ -0.56
NR1I3-225ENST00000508387 OR4F3Q6IEY1 312 aa11.53□□□□□ -0.56
NR1I3-225ENST00000508387 PPP4R4Q6NUP7 873 aa11.53□□□□□ -0.56
NR1I3-225ENST00000508387 CDC73Q6P1J9 531 aa11.53□□□□□ -0.56
NR1I3-225ENST00000508387 LRIG3Q6UXM1 1119 aa11.53□□□□□ -0.56
NR1I3-225ENST00000508387 METTL25Q8N6Q8 603 aa11.53□□□□□ -0.56
NR1I3-225ENST00000508387 PPP1R14CQ8TAE6 165 aa11.53□□□□□ -0.56
NR1I3-225ENST00000508387 OR5P2Q8WZ92 322 aa11.53□□□□□ -0.56
NR1I3-225ENST00000508387 COQ8BQ96D53 544 aa11.53□□□□□ -0.56
NR1I3-225ENST00000508387 RNF145Q96MT1 663 aa11.53□□□□□ -0.56
NR1I3-225ENST00000508387 ZFP3Q96NJ6 502 aa11.53□□□□□ -0.56
NR1I3-225ENST00000508387 PIGQQ9BRB3 760 aa11.53□□□□□ -0.56
NR1I3-225ENST00000508387 AKTIPQ9H8T0 292 aa11.53□□□□□ -0.56
NR1I3-225ENST00000508387 SLC24A3Q9HC58 644 aa11.53□□□□□ -0.56
NR1I3-225ENST00000508387 MED17Q9NVC6 651 aa11.53□□□□□ -0.56
NR1I3-225ENST00000508387 FOXD3Q9UJU5 478 aaPredicted RBP11.53□□□□□ -0.56
NR1I3-225ENST00000508387 RAB21Q9UL25 225 aa11.53□□□□□ -0.56
NR1I3-225ENST00000508387 CLEC4AQ9UMR7 237 aa11.53□□□□□ -0.56
NR1I3-225ENST00000508387 TTC36A6NLP5 189 aa11.52□□□□□ -0.57
NR1I3-225ENST00000508387 A8MXE2 369 aa11.52□□□□□ -0.57
NR1I3-225ENST00000508387 C9JVG2 144 aa11.52□□□□□ -0.57
NR1I3-225ENST00000508387 EIF1AYO14602 144 aaKnown RBP11.52□□□□□ -0.57
NR1I3-225ENST00000508387 CFLARO15519 480 aa11.52□□□□□ -0.57
NR1I3-225ENST00000508387 NGFRP08138 427 aa11.52□□□□□ -0.57
NR1I3-225ENST00000508387 EPXP11678 715 aa11.52□□□□□ -0.57
NR1I3-225ENST00000508387 PSMA4P25789 261 aaKnown RBP11.52□□□□□ -0.57
NR1I3-225ENST00000508387 CCT3P49368 545 aaKnown RBP11.52□□□□□ -0.57
NR1I3-225ENST00000508387 SORDQ00796 357 aa11.52□□□□□ -0.57
NR1I3-225ENST00000508387 FOXF1Q12946 379 aa11.52□□□□□ -0.57
NR1I3-225ENST00000508387 GUSBP1Q15486 140 aa11.52□□□□□ -0.57
NR1I3-225ENST00000508387 TOMM34Q15785 309 aaPredicted RBP11.52□□□□□ -0.57
NR1I3-225ENST00000508387 PGS1Q32NB8 556 aa11.52□□□□□ -0.57
NR1I3-225ENST00000508387 SPDYE7PQ495Y7 208 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms