RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 DUSP2Q05923 314 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 ACER2Q5QJU3 275 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 HACD4Q5VWC8 232 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 UGT3A1Q6NUS8 523 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 LRRN1Q6UXK5 716 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 C4orf22Q6V702 233 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 CDHR3Q6ZTQ4 885 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 P4HA3Q7Z4N8 544 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 SETD3Q86TU7 594 aaPredicted RBP6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 PLA2G4DQ86XP0 818 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 MFSD6LQ8IWD5 586 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 SLC5A8Q8N695 610 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 WDR36Q8NI36 951 aaKnown RBP6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 BLOC1S5Q8TDH9 187 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 CA5BP1Q8WTZ4 195 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 C10orf35Q96D05 121 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 CELF6Q96J87 481 aaKnown RBP6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 VSTM2LQ96N03 204 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 PRAP1Q96NZ9 151 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 COPS8Q99627 209 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 RSG1Q9BU20 258 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 AMBRA1Q9C0C7 1298 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 GANQ9H2C0 597 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 FAM124BQ9H5Z6 455 aaPredicted RBP6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 ACTR5Q9H9F9 607 aaPredicted RBP6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 OPN4Q9UHM6 478 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 PNPLA7Q6ZV29 1317 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 CRB1P82279 1406 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 GOSR2O14653 212 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 DPM1O60762 260 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 CCNKO75909 580 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 TOX4O94842 621 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 TIAF1O95411 115 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 SSTR1P30872 391 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 DGKQP52824 942 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 TMEM33P57088 247 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 UBE2KP61086 200 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 LSM6P62312 80 aaKnown RBP6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 PSPHP78330 225 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 ILF3Q12906 894 aaKnown RBP eCLIP6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 ZNF268Q14587 947 aaPredicted RBP6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 RABL3Q5HYI8 236 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 SUSD4Q5VX71 490 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 CYB5R2Q6BCY4 276 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 LAIR1Q6GTX8 287 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 PRR27Q6MZM9 219 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 Q6ZUG5 572 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 MOB2Q70IA6 237 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 MYPOPQ86VE0 399 aaPredicted RBP6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 RANBP3LQ86VV4 465 aaPredicted RBP6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 C2orf73Q8N5S3 287 aaPredicted RBP6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 C12orf29Q8N999 325 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 OR2AP1Q8NGE2 309 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 OR2L2Q8NH16 312 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 VANGL1Q8TAA9 524 aaPredicted RBP6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 CXorf40AQ8TE69 158 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 MAFIPQ8WZ33 124 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 FAM3CQ92520 227 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 WDYHV1Q96HA8 205 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 TTYH2Q9BSA4 534 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 PTDSS2Q9BVG9 487 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 OSBPL1AQ9BXW6 950 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 CADM1Q9BY67 442 aaKnown RBP6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 ACSS3Q9H6R3 686 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 CAB39LQ9H9S4 337 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 ANKHQ9HCJ1 492 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 SH2B3Q9UQQ2 575 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 MEMO1Q9Y316 297 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 HEY1Q9Y5J3 304 aa6.91□□□□□ -1.3
PDGFRA-206ENST00000508170 PEAK1Q9H792 1746 aa6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 RTL1A6NKG5 1358 aa6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 SSH2Q76I76 1423 aa6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 ATP6V1G2-DDX39BF2Z307 99 aa6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 XRCC3O43542 346 aa6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 PCDH7O60245 1069 aa6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 WISP1O95388 367 aa6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 PSMG1O95456 288 aa6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 SYF2O95926 243 aaKnown RBP6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 MOCS2O96007 188 aaPredicted RBP6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 APOC1P02654 83 aa6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 GCP02774 474 aa6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 SP9P0CG40 484 aa6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 GRIA3P42263 894 aa6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 MRPS22P82650 360 aaKnown RBP6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 LSM11P83369 360 aaKnown RBP eCLIP6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 EXOSC2Q13868 293 aaKnown RBP6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 KRT81Q14533 505 aa6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 MARC1Q5VT66 337 aa6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 FAM166AQ6J272 317 aa6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 FAM71F2Q6NXP2 309 aa6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 C5orf46Q6UWT4 87 aa6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 ZNF517Q6ZMY9 492 aaPredicted RBP6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 FAM92BQ6ZTR7 304 aa6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 PARGQ86W56 976 aa6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 DCP2Q8IU60 420 aaKnown RBP6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 SPAG16Q8N0X2 631 aa6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 OR2AJ1Q8NGZ0 328 aa6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 OR52I2Q8NH67 350 aa6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 DYNC2LI1Q8TCX1 351 aa6.9□□□□□ -1.3
PDGFRA-206ENST00000508170 MRPL53Q96EL3 112 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms