RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 OR6B1O95007 311 aa9.29□□□□□ -0.92
RAB11FIP3-211ENST00000495663 F10P00742 488 aa9.29□□□□□ -0.92
RAB11FIP3-211ENST00000495663 IL12BP29460 328 aa9.29□□□□□ -0.92
RAB11FIP3-211ENST00000495663 PIGAP37287 484 aa9.29□□□□□ -0.92
RAB11FIP3-211ENST00000495663 CRATP43155 626 aa9.29□□□□□ -0.92
RAB11FIP3-211ENST00000495663 MAN2A2P49641 1150 aa9.29□□□□□ -0.92
RAB11FIP3-211ENST00000495663 PSMD4P55036 377 aaKnown RBP9.29□□□□□ -0.92
RAB11FIP3-211ENST00000495663 CASP9P55211 416 aa9.29□□□□□ -0.92
RAB11FIP3-211ENST00000495663 POU6F2P78424 691 aaPredicted RBP9.29□□□□□ -0.92
RAB11FIP3-211ENST00000495663 KRT72Q14CN4 511 aa9.29□□□□□ -0.92
RAB11FIP3-211ENST00000495663 DECR1Q16698 335 aa9.29□□□□□ -0.92
RAB11FIP3-211ENST00000495663 ATAD3BQ5T9A4 648 aa9.29□□□□□ -0.92
RAB11FIP3-211ENST00000495663 TNFAIP8L2Q6P589 184 aaPredicted RBP9.29□□□□□ -0.92
RAB11FIP3-211ENST00000495663 IL20RBQ6UXL0 311 aa9.29□□□□□ -0.92
RAB11FIP3-211ENST00000495663 ASB18Q6ZVZ8 466 aa9.29□□□□□ -0.92
RAB11FIP3-211ENST00000495663 TRPM8Q7Z2W7 1104 aa9.29□□□□□ -0.92
RAB11FIP3-211ENST00000495663 MSRB3Q8IXL7 192 aa9.29□□□□□ -0.92
RAB11FIP3-211ENST00000495663 CYP4Z2PQ8N1L4 340 aa9.29□□□□□ -0.92
RAB11FIP3-211ENST00000495663 EXD3Q8N9H8 876 aa9.29□□□□□ -0.92
RAB11FIP3-211ENST00000495663 OR4N2Q8NGD1 307 aa9.29□□□□□ -0.92
RAB11FIP3-211ENST00000495663 OR5D16Q8NGK9 328 aa9.29□□□□□ -0.92
RAB11FIP3-211ENST00000495663 PIK3R3Q92569 461 aa9.29□□□□□ -0.92
RAB11FIP3-211ENST00000495663 CDS1Q92903 461 aa9.29□□□□□ -0.92
RAB11FIP3-211ENST00000495663 TMBIM1Q969X1 311 aa9.29□□□□□ -0.92
RAB11FIP3-211ENST00000495663 ROPN1LQ96C74 230 aa9.29□□□□□ -0.92
RAB11FIP3-211ENST00000495663 LRRC58Q96CX6 371 aa9.29□□□□□ -0.92
RAB11FIP3-211ENST00000495663 SPACA9Q96E40 222 aaPredicted RBP9.29□□□□□ -0.92
RAB11FIP3-211ENST00000495663 OTUB1Q96FW1 271 aaPredicted RBP9.29□□□□□ -0.92
RAB11FIP3-211ENST00000495663 RMND5BQ96G75 393 aaPredicted RBP9.29□□□□□ -0.92
RAB11FIP3-211ENST00000495663 SLC35A4Q96G79 324 aa9.29□□□□□ -0.92
RAB11FIP3-211ENST00000495663 ANKRD27Q96NW4 1050 aa9.29□□□□□ -0.92
RAB11FIP3-211ENST00000495663 CGREF1Q99674 301 aa9.29□□□□□ -0.92
RAB11FIP3-211ENST00000495663 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.29□□□□□ -0.924e-8■■■□□ 14.8
RAB11FIP3-211ENST00000495663 SERHL2Q9H4I8 314 aa9.29□□□□□ -0.92
RAB11FIP3-211ENST00000495663 TRIM45Q9H8W5 580 aaPredicted RBP9.29□□□□□ -0.92
RAB11FIP3-211ENST00000495663 EXD2Q9NVH0 621 aa9.29□□□□□ -0.92
RAB11FIP3-211ENST00000495663 ANKRD10Q9NXR5 420 aa9.29□□□□□ -0.92
RAB11FIP3-211ENST00000495663 PLA2G3Q9NZ20 509 aa9.29□□□□□ -0.92
RAB11FIP3-211ENST00000495663 LRFN1Q9P244 771 aa9.29□□□□□ -0.92
RAB11FIP3-211ENST00000495663 TAGLN3Q9UI15 199 aa9.29□□□□□ -0.92
RAB11FIP3-211ENST00000495663 GMEB1Q9Y692 573 aa9.29□□□□□ -0.92
RAB11FIP3-211ENST00000495663 EML6Q6ZMW3 1958 aa9.29□□□□□ -0.92
RAB11FIP3-211ENST00000495663 GXYLT2A0PJZ3 443 aa9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 OR6C70A6NIJ9 312 aa9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 K7EM74 188 aa9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 TP53I11O14683 189 aa9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 TSPAN2O60636 221 aa9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 KCNK2O95069 426 aa9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 UNC5CO95185 931 aa9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 IL33O95760 270 aa9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 AK1P00568 194 aa9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 C1QCP02747 245 aa9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 OR12D1P0DN82 309 aa9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 NUDT2P50583 147 aa9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 TNFSF10P50591 281 aa9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 PNLIPRP2P54317 469 aa9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 DSTNP60981 165 aa9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 RPP38P78345 283 aaKnown RBP9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 MRPS22P82650 360 aaKnown RBP9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 FADDQ13158 208 aa9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 ART3Q13508 389 aa9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 EFR3AQ14156 821 aa9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 CAPRIN1Q14444 709 aaKnown RBP9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 RGNQ15493 299 aa9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 OR1C1Q15619 314 aa9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 NTRK2Q16620 822 aa9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 ZNF791Q3KP31 576 aaPredicted RBP9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 RUNDC3AQ59EK9 446 aa9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 DCST2Q5T1A1 773 aa9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 RTL4Q6ZR62 310 aa9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 NUP54Q7Z3B4 507 aa9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 C16orf62Q7Z3J2 963 aa9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 BCORP1Q8N888 145 aa9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 XAGE5Q8WWM1 108 aa9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 DIO2Q92813 273 aa9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 TMEM125Q96AQ2 219 aa9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 SGCZQ96LD1 299 aa9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 COL21A1Q96P44 957 aa9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 SIGLEC12Q96PQ1 595 aa9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 SH3GL1Q99961 368 aa9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 CPPED1Q9BRF8 314 aaPredicted RBP9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 BTBD2Q9BX70 525 aa9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 KRTAP4-2Q9BYR5 136 aa9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 SLC25A18Q9H1K4 315 aa9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 ZNF71Q9NQZ8 489 aaPredicted RBP9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 ARL8BQ9NVJ2 186 aa9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 THUMPD1Q9NXG2 353 aaKnown RBP9.28□□□□□ -0.92
RAB11FIP3-211ENST00000495663 C15orf38-AP3S2A0A0A6YYH1 394 aa9.27□□□□□ -0.93
RAB11FIP3-211ENST00000495663 TRAV17A0A0B4J275 112 aa9.27□□□□□ -0.93
RAB11FIP3-211ENST00000495663 TMEM247A6NEH6 219 aa9.27□□□□□ -0.93
RAB11FIP3-211ENST00000495663 FXYD1O00168 92 aa9.27□□□□□ -0.93
RAB11FIP3-211ENST00000495663 HMGN4O00479 90 aa9.27□□□□□ -0.93
RAB11FIP3-211ENST00000495663 HS6ST1O60243 411 aa9.27□□□□□ -0.93
RAB11FIP3-211ENST00000495663 SEMA7AO75326 666 aa9.27□□□□□ -0.93
RAB11FIP3-211ENST00000495663 SLC25A12O75746 678 aa9.27□□□□□ -0.93
RAB11FIP3-211ENST00000495663 NEURL1O76050 574 aa9.27□□□□□ -0.93
RAB11FIP3-211ENST00000495663 ETFAP13804 333 aa9.27□□□□□ -0.93
RAB11FIP3-211ENST00000495663 GPX2P18283 190 aa9.27□□□□□ -0.93
RAB11FIP3-211ENST00000495663 ATP6V1C1P21283 382 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms