RNA–Protein interactions for RNA: ENST00000493609.1

SMG7-208, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG7, Length 624 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-208ENST00000493609 BEND3Q5T5X7 828 aa4.43□□□□□ -1.7
SMG7-208ENST00000493609 PRR5LQ6MZQ0 368 aa4.43□□□□□ -1.7
SMG7-208ENST00000493609 Q6ZR54 194 aa4.43□□□□□ -1.7
SMG7-208ENST00000493609 CENPSQ8N2Z9 138 aa4.43□□□□□ -1.7
SMG7-208ENST00000493609 KDM8Q8N371 416 aa4.43□□□□□ -1.7
SMG7-208ENST00000493609 WDR36Q8NI36 951 aaKnown RBP4.43□□□□□ -1.7
SMG7-208ENST00000493609 TMEM231Q9H6L2 316 aa4.43□□□□□ -1.7
SMG7-208ENST00000493609 PURGQ9UJV8 347 aaKnown RBP4.43□□□□□ -1.7
SMG7-208ENST00000493609 FZR1Q9UM11 496 aa4.43□□□□□ -1.7
SMG7-208ENST00000493609 NAALAD2Q9Y3Q0 740 aa4.43□□□□□ -1.7
SMG7-208ENST00000493609 TP53BP1Q12888 1972 aaPredicted RBP4.43□□□□□ -1.7
SMG7-208ENST00000493609 MAP3K15Q6ZN16 1313 aa4.43□□□□□ -1.7
SMG7-208ENST00000493609 RNF103-CHMP3A0A140T963 221 aa4.42□□□□□ -1.7
SMG7-208ENST00000493609 KRT87PA6NCN2 255 aa4.42□□□□□ -1.7
SMG7-208ENST00000493609 LRIT2A6NDA9 550 aa4.42□□□□□ -1.7
SMG7-208ENST00000493609 PDLIM1O00151 329 aa4.42□□□□□ -1.7
SMG7-208ENST00000493609 HMMRO75330 724 aa4.42□□□□□ -1.7
SMG7-208ENST00000493609 UMPSP11172 480 aa4.42□□□□□ -1.7
SMG7-208ENST00000493609 FUT7Q11130 342 aa4.42□□□□□ -1.7
SMG7-208ENST00000493609 PEX6Q13608 980 aa4.42□□□□□ -1.7
SMG7-208ENST00000493609 SMC1AQ14683 1233 aaKnown RBP4.42□□□□□ -1.7
SMG7-208ENST00000493609 SLC10A1Q14973 349 aa4.42□□□□□ -1.7
SMG7-208ENST00000493609 KARSQ15046 597 aaKnown RBP4.42□□□□□ -1.7
SMG7-208ENST00000493609 LRIT3Q3SXY7 679 aa4.42□□□□□ -1.7
SMG7-208ENST00000493609 RABL6Q3YEC7 729 aaPredicted RBP4.42□□□□□ -1.7
SMG7-208ENST00000493609 ACSF3Q4G176 576 aaPredicted RBP4.42□□□□□ -1.7
SMG7-208ENST00000493609 LDLRAP1Q5SW96 308 aa4.42□□□□□ -1.7
SMG7-208ENST00000493609 OLFM4Q6UX06 510 aa4.42□□□□□ -1.7
SMG7-208ENST00000493609 TSEN54Q7Z6J9 526 aaKnown RBP4.42□□□□□ -1.7
SMG7-208ENST00000493609 ITPRIPQ8IWB1 547 aa4.42□□□□□ -1.7
SMG7-208ENST00000493609 U2AF1L4Q8WU68 220 aaKnown RBP4.42□□□□□ -1.7
SMG7-208ENST00000493609 SAMD8Q96LT4 415 aa4.42□□□□□ -1.7
SMG7-208ENST00000493609 TSPAN18Q96SJ8 248 aa4.42□□□□□ -1.7
SMG7-208ENST00000493609 KIAA1551Q9HCM1 1747 aa4.42□□□□□ -1.7
SMG7-208ENST00000493609 TIGARQ9NQ88 270 aa4.42□□□□□ -1.7
SMG7-208ENST00000493609 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.42□□□□□ -1.7
SMG7-208ENST00000493609 FAM114A2Q9NRY5 505 aa4.42□□□□□ -1.7
SMG7-208ENST00000493609 RSPH14Q9UHP6 348 aa4.42□□□□□ -1.7
SMG7-208ENST00000493609 BCAP29Q9UHQ4 241 aa4.42□□□□□ -1.7
SMG7-208ENST00000493609 PLEKHA6Q9Y2H5 1048 aa4.42□□□□□ -1.7
SMG7-208ENST00000493609 RNF115Q9Y4L5 304 aa4.42□□□□□ -1.7
SMG7-208ENST00000493609 ABCC12Q96J65 1359 aa4.41□□□□□ -1.7
SMG7-208ENST00000493609 LTBP1Q14766 1721 aa4.41□□□□□ -1.7
SMG7-208ENST00000493609 C11orf98E9PRG8 122 aa4.41□□□□□ -1.7
SMG7-208ENST00000493609 PRAMEF12O95522 483 aa4.41□□□□□ -1.7
SMG7-208ENST00000493609 RALAP11233 206 aa4.41□□□□□ -1.7
SMG7-208ENST00000493609 IDSP22304 550 aa4.41□□□□□ -1.7
SMG7-208ENST00000493609 RPA1P27694 616 aa4.41□□□□□ -1.7
SMG7-208ENST00000493609 SRYQ05066 204 aa4.41□□□□□ -1.7
SMG7-208ENST00000493609 GABPB1Q06547 395 aaPredicted RBP4.41□□□□□ -1.7
SMG7-208ENST00000493609 SLC39A6Q13433 755 aa4.41□□□□□ -1.7
SMG7-208ENST00000493609 SNX1Q13596 522 aa4.41□□□□□ -1.7
SMG7-208ENST00000493609 ZIC1Q15915 447 aa4.41□□□□□ -1.7
SMG7-208ENST00000493609 MICAQ29983 383 aa4.41□□□□□ -1.7
SMG7-208ENST00000493609 PARP6Q2NL67 630 aa4.41□□□□□ -1.7
SMG7-208ENST00000493609 PARP10Q53GL7 1025 aa4.41□□□□□ -1.7
SMG7-208ENST00000493609 PNCKQ6P2M8 343 aa4.41□□□□□ -1.7
SMG7-208ENST00000493609 VITQ6UXI7 678 aa4.41□□□□□ -1.7
SMG7-208ENST00000493609 ISLR2Q6UXK2 745 aa4.41□□□□□ -1.7
SMG7-208ENST00000493609 ARFGAP2Q8N6H7 521 aa4.41□□□□□ -1.7
SMG7-208ENST00000493609 MRPL43Q8N983 215 aaKnown RBP4.41□□□□□ -1.7
SMG7-208ENST00000493609 RFESDQ8TAC1 157 aa4.41□□□□□ -1.7
SMG7-208ENST00000493609 ZPLD1Q8TCW7 415 aa4.41□□□□□ -1.7
SMG7-208ENST00000493609 DQX1Q8TE96 717 aaKnown RBP4.41□□□□□ -1.7
SMG7-208ENST00000493609 FRAT1Q92837 279 aaPredicted RBP4.41□□□□□ -1.7
SMG7-208ENST00000493609 DNAJA3Q96EY1 480 aa4.41□□□□□ -1.7
SMG7-208ENST00000493609 ATG10Q9H0Y0 220 aa4.41□□□□□ -1.7
SMG7-208ENST00000493609 RWDD1Q9H446 243 aaPredicted RBP4.41□□□□□ -1.7
SMG7-208ENST00000493609 MBD2Q9UBB5 411 aa4.41□□□□□ -1.7
SMG7-208ENST00000493609 USP16Q9Y5T5 823 aa4.41□□□□□ -1.7
SMG7-208ENST00000493609 DOCK2Q92608 1830 aa4.41□□□□□ -1.7
SMG7-208ENST00000493609 UBE4BO95155 1302 aa4.41□□□□□ -1.7
SMG7-208ENST00000493609 RFX7Q2KHR2 1363 aa4.4□□□□□ -1.7
SMG7-208ENST00000493609 AK9Q5TCS8 1911 aa4.4□□□□□ -1.7
SMG7-208ENST00000493609 EFCAB7A8K855 629 aa4.4□□□□□ -1.71
SMG7-208ENST00000493609 IMPA2O14732 288 aa4.4□□□□□ -1.71
SMG7-208ENST00000493609 SSX5O60225 188 aa4.4□□□□□ -1.71
SMG7-208ENST00000493609 TOXO94900 526 aa4.4□□□□□ -1.71
SMG7-208ENST00000493609 PCCAP05165 728 aaPredicted RBP4.4□□□□□ -1.71
SMG7-208ENST00000493609 IGKV5-2P06315 115 aa4.4□□□□□ -1.71
SMG7-208ENST00000493609 UBTFL1P0CB47 393 aaPredicted RBP4.4□□□□□ -1.71
SMG7-208ENST00000493609 GHRP10912 638 aa4.4□□□□□ -1.71
SMG7-208ENST00000493609 IL1RL1Q01638 556 aa4.4□□□□□ -1.71
SMG7-208ENST00000493609 PAX2Q02962 417 aa4.4□□□□□ -1.71
SMG7-208ENST00000493609 PDIA5Q14554 519 aa4.4□□□□□ -1.71
SMG7-208ENST00000493609 CNSTQ6PJW8 725 aa4.4□□□□□ -1.71
SMG7-208ENST00000493609 P4HA3Q7Z4N8 544 aa4.4□□□□□ -1.71
SMG7-208ENST00000493609 ADCK1Q86TW2 530 aa4.4□□□□□ -1.71
SMG7-208ENST00000493609 SPAG16Q8N0X2 631 aa4.4□□□□□ -1.71
SMG7-208ENST00000493609 CD177Q8N6Q3 437 aa4.4□□□□□ -1.71
SMG7-208ENST00000493609 RNF148Q8N7C7 305 aa4.4□□□□□ -1.71
SMG7-208ENST00000493609 KLHL30-AS1Q8NEE0 82 aa4.4□□□□□ -1.71
SMG7-208ENST00000493609 FAM111AQ96PZ2 611 aa4.4□□□□□ -1.71
SMG7-208ENST00000493609 HSD3B7Q9H2F3 369 aa4.4□□□□□ -1.71
SMG7-208ENST00000493609 SOHLH2Q9NX45 425 aa4.4□□□□□ -1.71
SMG7-208ENST00000493609 IMPAD1Q9NX62 359 aa4.4□□□□□ -1.71
SMG7-208ENST00000493609 GDAP2Q9NXN4 497 aa4.4□□□□□ -1.71
SMG7-208ENST00000493609 ABCD2Q9UBJ2 740 aa4.4□□□□□ -1.71
SMG7-208ENST00000493609 ZNF490Q9ULM2 529 aaPredicted RBP4.4□□□□□ -1.71
SMG7-208ENST00000493609 PIN4Q9Y237 131 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms