RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 RAC1P63000 192 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 RAE1P78406 368 aaKnown RBP7.29□□□□□ -1.24
USP39-216ENST00000490193 GUCY2DQ02846 1103 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 LOXL1Q08397 574 aaPredicted RBP7.29□□□□□ -1.24
USP39-216ENST00000490193 ZNF155Q12901 538 aaPredicted RBP7.29□□□□□ -1.24
USP39-216ENST00000490193 CSTF3Q12996 717 aaKnown RBP7.29□□□□□ -1.24
USP39-216ENST00000490193 TAB1Q15750 504 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 TMEM249Q2WGJ8 235 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 ELOA3BQ3SY89 546 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 SGO1Q5FBB7 561 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 SFRP5Q5T4F7 317 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 LGSNQ5TDP6 509 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 MROH9Q5TGP6 573 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 GTF2IRD2BQ6EKJ0 949 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 MFSD12Q6NUT3 480 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 GALNT18Q6P9A2 607 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 FIGNL1Q6PIW4 674 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 APOOLQ6UXV4 268 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 TFAP2EQ6VUC0 442 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 ESPNLQ6ZVH7 1005 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 GALNT10Q86SR1 603 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 MARCH3Q86UD3 253 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 GTF2IRD2Q86UP8 949 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 WDR75Q8IWA0 830 aaKnown RBP7.29□□□□□ -1.24
USP39-216ENST00000490193 PLD6Q8N2A8 252 aaKnown RBP7.29□□□□□ -1.24
USP39-216ENST00000490193 OR2L13Q8N349 312 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 SVOPQ8N4V2 548 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 KBTBD8Q8NFY9 601 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 ELOA3Q8NG57 546 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 OR2V1Q8NHB1 315 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 PIWIL2Q8TC59 973 aaKnown RBP7.29□□□□□ -1.24
USP39-216ENST00000490193 ACTRT2Q8TDY3 377 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 RNF128Q8TEB7 428 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 ZNF483Q8TF39 744 aaPredicted RBP7.29□□□□□ -1.24
USP39-216ENST00000490193 HSD17B8Q92506 261 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 NEUROG1Q92886 237 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 EXOSC8Q96B26 276 aaKnown RBP7.29□□□□□ -1.24
USP39-216ENST00000490193 TNFRSF13CQ96RJ3 184 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 HBEGFQ99075 208 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 RHNO1Q9BSD3 238 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 LMF2Q9BU23 707 aaKnown RBP7.29□□□□□ -1.24
USP39-216ENST00000490193 TBL1XR1Q9BZK7 514 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 DPH5Q9H2P9 285 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 GP6Q9HCN6 339 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 Q9N2J8 555 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 GIMAP4Q9NUV9 329 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 FBXO34Q9NWN3 711 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 SENP1Q9P0U3 644 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 XPR1Q9UBH6 696 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 RNF14Q9UBS8 474 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 GDF2Q9UK05 429 aaPredicted RBP7.29□□□□□ -1.24
USP39-216ENST00000490193 ZNF225Q9UK10 706 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 MRTO4Q9UKD2 239 aaKnown RBP7.29□□□□□ -1.24
USP39-216ENST00000490193 NFU1Q9UMS0 254 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 C19orf53Q9UNZ5 99 aaPredicted RBP7.29□□□□□ -1.24
USP39-216ENST00000490193 SAR1BQ9Y6B6 198 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 PLCE1Q9P212 2302 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 SVEP1Q4LDE5 3571 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 IGHV4-30-2A0A087WSY4 118 aa7.28□□□□□ -1.24
USP39-216ENST00000490193 A0A0J9YW62 118 aa7.28□□□□□ -1.24
USP39-216ENST00000490193 GOLGA8QA0A0J9YX86 632 aa7.28□□□□□ -1.24
USP39-216ENST00000490193 GOLGA8OA6NCC3 632 aa7.28□□□□□ -1.24
USP39-216ENST00000490193 DPRXA6NFQ7 191 aa7.28□□□□□ -1.24
USP39-216ENST00000490193 TTC36A6NLP5 189 aa7.28□□□□□ -1.24
USP39-216ENST00000490193 ALG1L2C9J202 215 aa7.28□□□□□ -1.24
USP39-216ENST00000490193 GOLGA8NF8WBI6 632 aa7.28□□□□□ -1.24
USP39-216ENST00000490193 GOLGA8RI6L899 631 aa7.28□□□□□ -1.24
USP39-216ENST00000490193 PPP6CO00743 305 aa7.28□□□□□ -1.24
USP39-216ENST00000490193 PCDH7O60245 1069 aa7.28□□□□□ -1.24
USP39-216ENST00000490193 DLX3O60479 287 aa7.28□□□□□ -1.24
USP39-216ENST00000490193 SMIM24O75264 130 aa7.28□□□□□ -1.24
USP39-216ENST00000490193 UTS2O95399 124 aa7.28□□□□□ -1.24
USP39-216ENST00000490193 ESRRBO95718 433 aa7.28□□□□□ -1.24
USP39-216ENST00000490193 NGFRP08138 427 aa7.28□□□□□ -1.24
USP39-216ENST00000490193 PABPC4LP0CB38 370 aaKnown RBP7.28□□□□□ -1.24
USP39-216ENST00000490193 PAFAH1B1P43034 410 aa7.28□□□□□ -1.24
USP39-216ENST00000490193 MAGEA4P43358 317 aa7.28□□□□□ -1.24
USP39-216ENST00000490193 DSCR9P59020 149 aa7.28□□□□□ -1.24
USP39-216ENST00000490193 CAV1Q03135 178 aa7.28□□□□□ -1.24
USP39-216ENST00000490193 BSPH1Q075Z2 132 aa7.28□□□□□ -1.24
USP39-216ENST00000490193 FAPQ12884 760 aa7.28□□□□□ -1.24
USP39-216ENST00000490193 P2RY6Q15077 328 aa7.28□□□□□ -1.24
USP39-216ENST00000490193 RNPS1Q15287 305 aaKnown RBP7.28□□□□□ -1.24
USP39-216ENST00000490193 ZNF239Q16600 458 aaKnown RBP7.28□□□□□ -1.24
USP39-216ENST00000490193 SPIN4Q56A73 249 aa7.28□□□□□ -1.24
USP39-216ENST00000490193 SH2D4BQ5SQS7 431 aa7.28□□□□□ -1.24
USP39-216ENST00000490193 PDSS1Q5T2R2 415 aa7.28□□□□□ -1.24
USP39-216ENST00000490193 PPP4R4Q6NUP7 873 aa7.28□□□□□ -1.24
USP39-216ENST00000490193 SSX8Q7RTT4 187 aa7.28□□□□□ -1.24
USP39-216ENST00000490193 ATG4DQ86TL0 474 aaPredicted RBP7.28□□□□□ -1.24
USP39-216ENST00000490193 TDRPQ86YL5 185 aa7.28□□□□□ -1.24
USP39-216ENST00000490193 C16orf78Q8WTQ4 265 aa7.28□□□□□ -1.24
USP39-216ENST00000490193 HOXB13Q92826 284 aaPredicted RBP7.28□□□□□ -1.24
USP39-216ENST00000490193 ZBTB8AQ96BR9 441 aa7.28□□□□□ -1.24
USP39-216ENST00000490193 C19orf24Q9BVV8 132 aa7.28□□□□□ -1.24
USP39-216ENST00000490193 POTEKPQ9BYX7 375 aa7.28□□□□□ -1.24
USP39-216ENST00000490193 ALG2Q9H553 416 aa7.28□□□□□ -1.24
USP39-216ENST00000490193 FAIMQ9NVQ4 179 aa7.28□□□□□ -1.24
USP39-216ENST00000490193 SIRT5Q9NXA8 310 aa7.28□□□□□ -1.24
USP39-216ENST00000490193 TAS2R7Q9NYW3 318 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms