RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 PPOXP50336 477 aa10.06□□□□□ -0.8
HDAC6-233ENST00000489352 CHIT1Q13231 466 aa10.06□□□□□ -0.8
HDAC6-233ENST00000489352 RIN1Q13671 783 aa10.06□□□□□ -0.8
HDAC6-233ENST00000489352 OASLQ15646 514 aaKnown RBP10.06□□□□□ -0.8
HDAC6-233ENST00000489352 ZNF239Q16600 458 aaKnown RBP10.06□□□□□ -0.8
HDAC6-233ENST00000489352 PDK4Q16654 411 aa10.06□□□□□ -0.8
HDAC6-233ENST00000489352 PRICKLE4Q2TBC4 344 aa10.06□□□□□ -0.8
HDAC6-233ENST00000489352 FCRLAQ7L513 359 aa10.06□□□□□ -0.8
HDAC6-233ENST00000489352 ZNF433Q8N7K0 673 aaPredicted RBP10.06□□□□□ -0.8
HDAC6-233ENST00000489352 OR4M2Q8NGB6 313 aa10.06□□□□□ -0.8
HDAC6-233ENST00000489352 PDLIM5Q96HC4 596 aaKnown RBP10.06□□□□□ -0.8
HDAC6-233ENST00000489352 CALR3Q96L12 384 aaKnown RBP10.06□□□□□ -0.8
HDAC6-233ENST00000489352 TESQ9UGI8 421 aaKnown RBP10.06□□□□□ -0.8
HDAC6-233ENST00000489352 GPR55Q9Y2T6 319 aaPredicted RBP10.06□□□□□ -0.8
HDAC6-233ENST00000489352 SLC25A15Q9Y619 301 aa10.06□□□□□ -0.8
HDAC6-233ENST00000489352 A0A1B0GUS0 222 aa10.05□□□□□ -0.8
HDAC6-233ENST00000489352 SDR42E2A6NKP2 422 aa10.05□□□□□ -0.8
HDAC6-233ENST00000489352 AVPP01185 164 aa10.05□□□□□ -0.8
HDAC6-233ENST00000489352 GAAP10253 952 aa10.05□□□□□ -0.8
HDAC6-233ENST00000489352 SAGP10523 405 aaPredicted RBP10.05□□□□□ -0.8
HDAC6-233ENST00000489352 OMGP23515 440 aa10.05□□□□□ -0.8
HDAC6-233ENST00000489352 FEN1P39748 380 aaKnown RBP10.05□□□□□ -0.8
HDAC6-233ENST00000489352 SLC1A3P43003 542 aa10.05□□□□□ -0.8
HDAC6-233ENST00000489352 EMDP50402 254 aa10.05□□□□□ -0.8
HDAC6-233ENST00000489352 LOXL3P58215 753 aa10.05□□□□□ -0.8
HDAC6-233ENST00000489352 ZP4Q12836 540 aa10.05□□□□□ -0.8
HDAC6-233ENST00000489352 FAM189A2Q15884 450 aa10.05□□□□□ -0.8
HDAC6-233ENST00000489352 ZNF311Q5JNZ3 666 aa10.05□□□□□ -0.8
HDAC6-233ENST00000489352 SLC43A2Q8N370 569 aa10.05□□□□□ -0.8
HDAC6-233ENST00000489352 TCAIMQ8N3R3 496 aa10.05□□□□□ -0.8
HDAC6-233ENST00000489352 RNF10Q8N5U6 811 aaKnown RBP10.05□□□□□ -0.8
HDAC6-233ENST00000489352 CLDND2Q8NHS1 167 aa10.05□□□□□ -0.8
HDAC6-233ENST00000489352 FAM110DQ8TAY7 271 aaPredicted RBP10.05□□□□□ -0.8
HDAC6-233ENST00000489352 C1orf54Q8WWF1 131 aa10.05□□□□□ -0.8
HDAC6-233ENST00000489352 TMIGD2Q96BF3 282 aa10.05□□□□□ -0.8
HDAC6-233ENST00000489352 WDR34Q96EX3 536 aa10.05□□□□□ -0.8
HDAC6-233ENST00000489352 GPA33Q99795 319 aa10.05□□□□□ -0.8
HDAC6-233ENST00000489352 BEX1Q9HBH7 125 aa10.05□□□□□ -0.8
HDAC6-233ENST00000489352 TREM2Q9NZC2 230 aa10.05□□□□□ -0.8
HDAC6-233ENST00000489352 MAT2BQ9NZL9 334 aa10.05□□□□□ -0.8
HDAC6-233ENST00000489352 KLHL9Q9P2J3 617 aa10.05□□□□□ -0.8
HDAC6-233ENST00000489352 CTNNAL1Q9UBT7 734 aa10.05□□□□□ -0.8
HDAC6-233ENST00000489352 MID2Q9UJV3 735 aa10.05□□□□□ -0.8
HDAC6-233ENST00000489352 ABCG2Q9UNQ0 655 aa10.05□□□□□ -0.8
HDAC6-233ENST00000489352 VWA7Q9Y334 891 aa10.05□□□□□ -0.8
HDAC6-233ENST00000489352 A0A087WZY1 265 aa10.04□□□□□ -0.8
HDAC6-233ENST00000489352 ZCWPW2A0A1B0GU75 182 aa10.04□□□□□ -0.8
HDAC6-233ENST00000489352 VSTM5A8MXK1 200 aa10.04□□□□□ -0.8
HDAC6-233ENST00000489352 TMPRSS11DO60235 418 aa10.04□□□□□ -0.8
HDAC6-233ENST00000489352 ERAL1O75616 437 aaKnown RBP10.04□□□□□ -0.8
HDAC6-233ENST00000489352 STK16O75716 305 aa10.04□□□□□ -0.8
HDAC6-233ENST00000489352 BCAS2O75934 225 aaPredicted RBP10.04□□□□□ -0.8
HDAC6-233ENST00000489352 TPM3P06753 285 aa10.04□□□□□ -0.8
HDAC6-233ENST00000489352 COX5AP20674 150 aa10.04□□□□□ -0.8
HDAC6-233ENST00000489352 PTX3P26022 381 aaPredicted RBP10.04□□□□□ -0.8
HDAC6-233ENST00000489352 SFTPDP35247 375 aa10.04□□□□□ -0.8
HDAC6-233ENST00000489352 GPR6P46095 362 aaPredicted RBP10.04□□□□□ -0.8
HDAC6-233ENST00000489352 VPS41P49754 854 aa10.04□□□□□ -0.8
HDAC6-233ENST00000489352 ARFIP1P53367 373 aa10.04□□□□□ -0.8
HDAC6-233ENST00000489352 PGGT1BP53609 377 aa10.04□□□□□ -0.8
HDAC6-233ENST00000489352 PHEXP78562 749 aa10.04□□□□□ -0.8
HDAC6-233ENST00000489352 MYBPC1Q00872 1141 aa10.04□□□□□ -0.8
HDAC6-233ENST00000489352 IL1RL1Q01638 556 aa10.04□□□□□ -0.8
HDAC6-233ENST00000489352 C17orf67Q0P5P2 114 aa10.04□□□□□ -0.8
HDAC6-233ENST00000489352 TMEM44Q2T9K0 475 aa10.04□□□□□ -0.8
HDAC6-233ENST00000489352 TRMT12Q53H54 448 aaKnown RBP10.04□□□□□ -0.8
HDAC6-233ENST00000489352 DCAF12L2Q5VW00 463 aa10.04□□□□□ -0.8
HDAC6-233ENST00000489352 ANKRD22Q5VYY1 191 aa10.04□□□□□ -0.8
HDAC6-233ENST00000489352 OR7E24Q6IFN5 339 aa10.04□□□□□ -0.8
HDAC6-233ENST00000489352 MRM1Q6IN84 353 aaKnown RBP10.04□□□□□ -0.8
HDAC6-233ENST00000489352 ADAMTSL2Q86TH1 951 aa10.04□□□□□ -0.8
HDAC6-233ENST00000489352 MARCH3Q86UD3 253 aa10.04□□□□□ -0.8
HDAC6-233ENST00000489352 TREML1Q86YW5 311 aa10.04□□□□□ -0.8
HDAC6-233ENST00000489352 LILRA2Q8N149 483 aa10.04□□□□□ -0.8
HDAC6-233ENST00000489352 NKAPQ8N5F7 415 aaKnown RBP10.04□□□□□ -0.8
HDAC6-233ENST00000489352 C2CD4AQ8NCU7 369 aaPredicted RBP10.04□□□□□ -0.8
HDAC6-233ENST00000489352 OR7G3Q8NG95 312 aa10.04□□□□□ -0.8
HDAC6-233ENST00000489352 RNF217Q8TC41 542 aa10.04□□□□□ -0.8
HDAC6-233ENST00000489352 KLHL15Q96M94 604 aa10.04□□□□□ -0.8
HDAC6-233ENST00000489352 TBL1XR1Q9BZK7 514 aa10.04□□□□□ -0.8
HDAC6-233ENST00000489352 ABHD10Q9NUJ1 306 aa10.04□□□□□ -0.8
HDAC6-233ENST00000489352 ZDHHC2Q9UIJ5 367 aa10.04□□□□□ -0.8
HDAC6-233ENST00000489352 TFR2Q9UP52 801 aa10.04□□□□□ -0.8
HDAC6-233ENST00000489352 COL7A1Q02388 2944 aa10.04□□□□□ -0.8
HDAC6-233ENST00000489352 A0A0A6YYD5 115 aa10.03□□□□□ -0.8
HDAC6-233ENST00000489352 C9JVG2 144 aa10.03□□□□□ -0.8
HDAC6-233ENST00000489352 LYNX1G3V0Z9 82 aa10.03□□□□□ -0.8
HDAC6-233ENST00000489352 J3QLI3 93 aa10.03□□□□□ -0.8
HDAC6-233ENST00000489352 FOXE1O00358 373 aaPredicted RBP10.03□□□□□ -0.8
HDAC6-233ENST00000489352 CCNT2O60583 730 aaKnown RBP10.03□□□□□ -0.8
HDAC6-233ENST00000489352 PRAMEF4O60810 478 aa10.03□□□□□ -0.8
HDAC6-233ENST00000489352 CBX7O95931 251 aa10.03□□□□□ -0.8
HDAC6-233ENST00000489352 GBAP04062 536 aa10.03□□□□□ -0.8
HDAC6-233ENST00000489352 RNASE1P07998 156 aaKnown RBP10.03□□□□□ -0.8
HDAC6-233ENST00000489352 CCDC175P0C221 793 aa10.03□□□□□ -0.8
HDAC6-233ENST00000489352 OR4A8P0C604 315 aa10.03□□□□□ -0.8
HDAC6-233ENST00000489352 LYNX1P0DP58 116 aa10.03□□□□□ -0.8
HDAC6-233ENST00000489352 CSNK2A2P19784 350 aaPredicted RBP10.03□□□□□ -0.8
HDAC6-233ENST00000489352 HSPA7P48741 367 aa10.03□□□□□ -0.8
HDAC6-233ENST00000489352 ZNF41P51814 821 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms