RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 RASAL1O95294 804 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 NGFRP08138 427 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 T-ENOLP0DO92 83 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 ARAFP10398 606 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 EVI2BP34910 448 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 DCTP40126 519 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 SLC7A2P52569 658 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 EEFSECP57772 596 aaKnown RBP9.43□□□□□ -0.9
SKA1-204ENST00000488454 GPR85P60893 370 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 PLGLB1Q02325 96 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 CHRNEQ04844 493 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 LIPEQ05469 1076 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 SCARB2Q14108 478 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 GRAMD1BQ3KR37 738 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 INTS11Q5TA45 600 aaKnown RBP9.43□□□□□ -0.9
SKA1-204ENST00000488454 PRAMEF8Q5VWM4 474 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 PRAMEF7Q5VXH5 474 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 SLC6A19Q695T7 634 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 TYW3Q6IPR3 259 aaKnown RBP9.43□□□□□ -0.9
SKA1-204ENST00000488454 REEP3Q6NUK4 255 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 RPUSD3Q6P087 351 aaKnown RBP9.43□□□□□ -0.9
SKA1-204ENST00000488454 ERICH5Q6P6B1 374 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.43□□□□□ -0.9
SKA1-204ENST00000488454 PTRH1Q86Y79 214 aaKnown RBP9.43□□□□□ -0.9
SKA1-204ENST00000488454 SULF2Q8IWU5 870 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 SLC15A3Q8IY34 581 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 PEX5LQ8IYB4 626 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 DEFB107AQ8IZN7 70 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 ZNF619Q8N2I2 560 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 ZNF614Q8N883 585 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 HIPK4Q8NE63 616 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 TNIP2Q8NFZ5 429 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 OR2T12Q8NG77 320 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 OR4C3Q8NH37 302 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 NFKBIDQ8NI38 313 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 BBS10Q8TAM1 723 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 OIT3Q8WWZ8 545 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 DTNBP1Q96EV8 351 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 TMEM19Q96HH6 336 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 JSRP1Q96MG2 331 aaPredicted RBP9.43□□□□□ -0.9
SKA1-204ENST00000488454 ZNF607Q96SK3 696 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 CDRT15Q96T59 188 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 SPATA5L1Q9BVQ7 753 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 OSBPL11Q9BXB4 747 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 ANGPTL4Q9BY76 406 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 ZNF350Q9GZX5 532 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 SAP130Q9H0E3 1048 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 SH2D2AQ9NP31 389 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 FBXO34Q9NWN3 711 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 CMTM6Q9NX76 183 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 BOKQ9UMX3 212 aaPredicted RBP9.43□□□□□ -0.9
SKA1-204ENST00000488454 ANGPT4Q9Y264 503 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 DTNAQ9Y4J8 743 aa9.43□□□□□ -0.9
SKA1-204ENST00000488454 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.43□□□□□ -0.9
SKA1-204ENST00000488454 CACNA1BQ00975 2339 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 NPIPA5A0A0B4J1W7 369 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 ELOVL7A1L3X0 281 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 PRAMEF27A3QJZ7 478 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 EIF4E1BA6NMX2 242 aaKnown RBP9.42□□□□□ -0.9
SKA1-204ENST00000488454 NPIPA7E9PJI5 369 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 GSTA4O15217 222 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 GYG2O15488 501 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 NDUFB5O43674 189 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 SCO2O43819 266 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 FADS1O60427 444 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 SERPINB7O75635 380 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 PDE9AO76083 593 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 PGM3O95394 542 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 OXSR1O95747 527 aaPredicted RBP9.42□□□□□ -0.9
SKA1-204ENST00000488454 CRYABP02511 175 aaKnown RBP9.42□□□□□ -0.9
SKA1-204ENST00000488454 DBIP07108 87 aaKnown RBP9.42□□□□□ -0.9
SKA1-204ENST00000488454 CHRM4P08173 479 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 NPIPA8P0DM63 369 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 IL7RP16871 459 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 MEOX1P50221 254 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 C17orf67Q0P5P2 114 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 FUT5Q11128 374 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 NFATC3Q12968 1075 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 BNIP1Q12981 228 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 LARS2Q15031 903 aaKnown RBP9.42□□□□□ -0.9
SKA1-204ENST00000488454 ZNF141Q15928 474 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 INAQ16352 499 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 VMACQ2NL98 169 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 SAMD4BQ5PRF9 694 aaKnown RBP9.42□□□□□ -0.9
SKA1-204ENST00000488454 C8orf82Q6P1X6 216 aaPredicted RBP9.42□□□□□ -0.9
SKA1-204ENST00000488454 TMEM81Q6P7N7 255 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 PCSK4Q6UW60 755 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 FRRS1Q6ZNA5 592 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 RINLQ6ZS11 566 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 CCDC121Q6ZUS5 278 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 NET1Q7Z628 596 aaPredicted RBP9.42□□□□□ -0.9
SKA1-204ENST00000488454 ZAR1Q86SH2 424 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 MARCH3Q86UD3 253 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 MISPQ8IVT2 679 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 POGLUT1Q8NBL1 392 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 RBM15BQ8NDT2 890 aaKnown RBP9.42□□□□□ -0.9
SKA1-204ENST00000488454 OR2M7Q8NG81 312 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 OR1J4Q8NGS1 313 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 PHOSPHO1Q8TCT1 267 aa9.42□□□□□ -0.9
SKA1-204ENST00000488454 GRHL3Q8TE85 626 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms