RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 TMCC3Q9ULS5 477 aa3.98□□□□□ -1.77
PRPF38A-203ENST00000487160 FOXJ3Q9UPW0 622 aa3.98□□□□□ -1.77
PRPF38A-203ENST00000487160 USP16Q9Y5T5 823 aa3.98□□□□□ -1.77
PRPF38A-203ENST00000487160 CUL9Q8IWT3 2517 aa3.98□□□□□ -1.77
PRPF38A-203ENST00000487160 PCNX3Q9H6A9 2034 aa3.97□□□□□ -1.77
PRPF38A-203ENST00000487160 A0A087WZY1 265 aa3.97□□□□□ -1.77
PRPF38A-203ENST00000487160 A0A1B0GTH9 108 aa3.97□□□□□ -1.77
PRPF38A-203ENST00000487160 A0A1W2PPR1 153 aa3.97□□□□□ -1.77
PRPF38A-203ENST00000487160 RNF222A6NCQ9 220 aa3.97□□□□□ -1.77
PRPF38A-203ENST00000487160 SHISA9B4DS77 424 aa3.97□□□□□ -1.77
PRPF38A-203ENST00000487160 H0YL77 283 aa3.97□□□□□ -1.77
PRPF38A-203ENST00000487160 H3BTX0 84 aa3.97□□□□□ -1.77
PRPF38A-203ENST00000487160 PDLIM1O00151 329 aa3.97□□□□□ -1.77
PRPF38A-203ENST00000487160 SDC3O75056 442 aa3.97□□□□□ -1.77
PRPF38A-203ENST00000487160 TOXO94900 526 aa3.97□□□□□ -1.77
PRPF38A-203ENST00000487160 MT-ND1P03886 318 aa3.97□□□□□ -1.77
PRPF38A-203ENST00000487160 ADRA1AP35348 466 aa3.97□□□□□ -1.77
PRPF38A-203ENST00000487160 MDH1P40925 334 aaKnown RBP3.97□□□□□ -1.77
PRPF38A-203ENST00000487160 HTR5AP47898 357 aa3.97□□□□□ -1.77
PRPF38A-203ENST00000487160 TRPC1P48995 793 aa3.97□□□□□ -1.77
PRPF38A-203ENST00000487160 MRPS6P82932 125 aaKnown RBP3.97□□□□□ -1.77
PRPF38A-203ENST00000487160 KLHL30Q0D2K2 578 aa3.97□□□□□ -1.77
PRPF38A-203ENST00000487160 BNIP1Q12981 228 aa3.97□□□□□ -1.77
PRPF38A-203ENST00000487160 ACER2Q5QJU3 275 aa3.97□□□□□ -1.77
PRPF38A-203ENST00000487160 BEND6Q5SZJ8 279 aaPredicted RBP3.97□□□□□ -1.77
PRPF38A-203ENST00000487160 ARMCX5Q6P1M9 558 aa3.97□□□□□ -1.77
PRPF38A-203ENST00000487160 AFTPHQ6ULP2 937 aa3.97□□□□□ -1.77
PRPF38A-203ENST00000487160 ZNF841Q6ZN19 808 aa3.97□□□□□ -1.77
PRPF38A-203ENST00000487160 VPS36Q86VN1 386 aa3.97□□□□□ -1.77
PRPF38A-203ENST00000487160 DCPSQ96C86 337 aaKnown RBP3.97□□□□□ -1.77
PRPF38A-203ENST00000487160 FAM173AQ9BQD7 235 aa3.97□□□□□ -1.77
PRPF38A-203ENST00000487160 FICDQ9BVA6 458 aa3.97□□□□□ -1.77
PRPF38A-203ENST00000487160 RBM24Q9BX46 236 aaKnown RBP3.97□□□□□ -1.77
PRPF38A-203ENST00000487160 TSPY26PQ9H489 355 aa3.97□□□□□ -1.77
PRPF38A-203ENST00000487160 KAT8Q9H7Z6 458 aaKnown RBP3.97□□□□□ -1.77
PRPF38A-203ENST00000487160 GNB4Q9HAV0 340 aa3.97□□□□□ -1.77
PRPF38A-203ENST00000487160 ESM1Q9NQ30 184 aa3.97□□□□□ -1.77
PRPF38A-203ENST00000487160 RCOR3Q9P2K3 495 aaPredicted RBP3.97□□□□□ -1.77
PRPF38A-203ENST00000487160 GHRLQ9UBU3 117 aa3.97□□□□□ -1.77
PRPF38A-203ENST00000487160 CIDEBQ9UHD4 219 aa3.97□□□□□ -1.77
PRPF38A-203ENST00000487160 RNF115Q9Y4L5 304 aa3.97□□□□□ -1.77
PRPF38A-203ENST00000487160 STYXL1Q9Y6J8 313 aa3.97□□□□□ -1.77
PRPF38A-203ENST00000487160 AP1M2Q9Y6Q5 423 aa3.97□□□□□ -1.77
PRPF38A-203ENST00000487160 U3KQV3 271 aa3.97□□□□□ -1.77
PRPF38A-203ENST00000487160 IBTKQ9P2D0 1353 aaPredicted RBP3.97□□□□□ -1.77
PRPF38A-203ENST00000487160 UBN2Q6ZU65 1347 aa3.96□□□□□ -1.77
PRPF38A-203ENST00000487160 MGAMO43451 1857 aa3.96□□□□□ -1.77
PRPF38A-203ENST00000487160 ZNF609O15014 1411 aa3.96□□□□□ -1.77
PRPF38A-203ENST00000487160 A0A1B0GUL7 405 aa3.96□□□□□ -1.78
PRPF38A-203ENST00000487160 TTC26A0AVF1 554 aa3.96□□□□□ -1.78
PRPF38A-203ENST00000487160 LRIT2A6NDA9 550 aa3.96□□□□□ -1.78
PRPF38A-203ENST00000487160 MCF2LO15068 1137 aa3.96□□□□□ -1.78
PRPF38A-203ENST00000487160 CLDN3O15551 220 aa3.96□□□□□ -1.78
PRPF38A-203ENST00000487160 PI15O43692 258 aa3.96□□□□□ -1.78
PRPF38A-203ENST00000487160 NUDT14O95848 222 aa3.96□□□□□ -1.78
PRPF38A-203ENST00000487160 ANXA4P09525 319 aaPredicted RBP3.96□□□□□ -1.78
PRPF38A-203ENST00000487160 SLC35G4P0C7Q5 338 aa3.96□□□□□ -1.78
PRPF38A-203ENST00000487160 PTGFRP43088 359 aa3.96□□□□□ -1.78
PRPF38A-203ENST00000487160 MFAP2P55001 183 aa3.96□□□□□ -1.78
PRPF38A-203ENST00000487160 PPIAP62937 165 aaKnown RBP3.96□□□□□ -1.78
PRPF38A-203ENST00000487160 ZNF85Q03923 595 aa3.96□□□□□ -1.78
PRPF38A-203ENST00000487160 EXOSC2Q13868 293 aaKnown RBP3.96□□□□□ -1.78
PRPF38A-203ENST00000487160 CYLC2Q14093 348 aaPredicted RBP3.96□□□□□ -1.78
PRPF38A-203ENST00000487160 ZNF506Q5JVG8 444 aa3.96□□□□□ -1.78
PRPF38A-203ENST00000487160 LINC00242Q5T6M2 205 aa3.96□□□□□ -1.78
PRPF38A-203ENST00000487160 SEL1L2Q5TEA6 688 aa3.96□□□□□ -1.78
PRPF38A-203ENST00000487160 LEMD1Q68G75 181 aa3.96□□□□□ -1.78
PRPF38A-203ENST00000487160 REP15Q6BDI9 236 aa3.96□□□□□ -1.78
PRPF38A-203ENST00000487160 DMKNQ6E0U4 476 aaPredicted RBP3.96□□□□□ -1.78
PRPF38A-203ENST00000487160 GALNT17Q6IS24 598 aa3.96□□□□□ -1.78
PRPF38A-203ENST00000487160 ABRAXAS1Q6UWZ7 409 aa3.96□□□□□ -1.78
PRPF38A-203ENST00000487160 GSG1LQ6UXU4 331 aa3.96□□□□□ -1.78
PRPF38A-203ENST00000487160 ZNF562Q6V9R5 426 aa3.96□□□□□ -1.78
PRPF38A-203ENST00000487160 STOX1Q6ZVD7 989 aa3.96□□□□□ -1.78
PRPF38A-203ENST00000487160 STXBP4Q6ZWJ1 553 aa3.96□□□□□ -1.78
PRPF38A-203ENST00000487160 LPCAT2Q7L5N7 544 aa3.96□□□□□ -1.78
PRPF38A-203ENST00000487160 PRSS48Q7RTY5 328 aa3.96□□□□□ -1.78
PRPF38A-203ENST00000487160 LRRC49Q8IUZ0 686 aa3.96□□□□□ -1.78
PRPF38A-203ENST00000487160 ARL6IP6Q8N6S5 226 aa3.96□□□□□ -1.78
PRPF38A-203ENST00000487160 SOSTQ9BQB4 213 aa3.96□□□□□ -1.78
PRPF38A-203ENST00000487160 TTYH2Q9BSA4 534 aa3.96□□□□□ -1.78
PRPF38A-203ENST00000487160 THUMPD2Q9BTF0 503 aaKnown RBP3.96□□□□□ -1.78
PRPF38A-203ENST00000487160 RPAP3Q9H6T3 665 aaPredicted RBP3.96□□□□□ -1.78
PRPF38A-203ENST00000487160 TRPV5Q9NQA5 729 aa3.96□□□□□ -1.78
PRPF38A-203ENST00000487160 ABCC13Q9NSE7 274 aa3.96□□□□□ -1.78
PRPF38A-203ENST00000487160 SLC35D1Q9NTN3 355 aa3.96□□□□□ -1.78
PRPF38A-203ENST00000487160 MLXQ9UH92 298 aa3.96□□□□□ -1.78
PRPF38A-203ENST00000487160 BLOC1S6Q9UL45 172 aa3.96□□□□□ -1.78
PRPF38A-203ENST00000487160 MRPL11Q9Y3B7 192 aaKnown RBP3.96□□□□□ -1.78
PRPF38A-203ENST00000487160 CEMIPQ8WUJ3 1361 aa3.96□□□□□ -1.78
PRPF38A-203ENST00000487160 LAMA3Q16787 3333 aa3.96□□□□□ -1.78
PRPF38A-203ENST00000487160 EYSQ5T1H1 3165 aa3.96□□□□□ -1.78
PRPF38A-203ENST00000487160 MYH3P11055 1940 aa3.95□□□□□ -1.78
PRPF38A-203ENST00000487160 RTL9Q8NET4 1388 aa3.95□□□□□ -1.78
PRPF38A-203ENST00000487160 FOXI3A8MTJ6 420 aaPredicted RBP3.95□□□□□ -1.78
PRPF38A-203ENST00000487160 NPIPA2E9PIF3 369 aa3.95□□□□□ -1.78
PRPF38A-203ENST00000487160 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.95□□□□□ -1.78
PRPF38A-203ENST00000487160 ALOX15BO15296 676 aa3.95□□□□□ -1.78
PRPF38A-203ENST00000487160 PEX11AO75192 247 aa3.95□□□□□ -1.78
PRPF38A-203ENST00000487160 GAS8-AS1O95177 125 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms