RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 SEC16AO15027 2179 aa11.57□□□□□ -0.56
HSPG2-211ENST00000486901 SPTBN5Q9NRC6 3674 aaKnown RBP11.57□□□□□ -0.56
HSPG2-211ENST00000486901 TRAV27A0A087WT01 109 aa11.57□□□□□ -0.56
HSPG2-211ENST00000486901 TRDV1A0A1B0GX56 115 aa11.57□□□□□ -0.56
HSPG2-211ENST00000486901 A0A1W2PRQ8 180 aa11.57□□□□□ -0.56
HSPG2-211ENST00000486901 OR52A4PA6NMU1 304 aa11.57□□□□□ -0.56
HSPG2-211ENST00000486901 C4orf51C9J302 202 aa11.57□□□□□ -0.56
HSPG2-211ENST00000486901 LGI1O95970 557 aa11.57□□□□□ -0.56
HSPG2-211ENST00000486901 ALDOBP05062 364 aa11.57□□□□□ -0.56
HSPG2-211ENST00000486901 PSMB10P40306 273 aa11.57□□□□□ -0.56
HSPG2-211ENST00000486901 TEKQ02763 1124 aa11.57□□□□□ -0.56
HSPG2-211ENST00000486901 MELKQ14680 651 aa11.57□□□□□ -0.56
HSPG2-211ENST00000486901 MINDY4Q4G0A6 757 aa11.57□□□□□ -0.56
HSPG2-211ENST00000486901 ENTPD8Q5MY95 495 aa11.57□□□□□ -0.56
HSPG2-211ENST00000486901 SFRP5Q5T4F7 317 aa11.57□□□□□ -0.56
HSPG2-211ENST00000486901 ZNF322Q6U7Q0 402 aaPredicted RBP11.57□□□□□ -0.56
HSPG2-211ENST00000486901 ALKAL2Q6UX46 152 aa11.57□□□□□ -0.56
HSPG2-211ENST00000486901 CXXC5Q7LFL8 322 aaKnown RBP11.57□□□□□ -0.56
HSPG2-211ENST00000486901 COQ8AQ8NI60 647 aa11.57□□□□□ -0.56
HSPG2-211ENST00000486901 ZNF671Q8TAW3 534 aa11.57□□□□□ -0.56
HSPG2-211ENST00000486901 ZCCHC2Q9C0B9 1178 aaKnown RBP11.57□□□□□ -0.56
HSPG2-211ENST00000486901 C20orf141Q9NUB4 165 aa11.57□□□□□ -0.56
HSPG2-211ENST00000486901 STOML2Q9UJZ1 356 aa11.57□□□□□ -0.56
HSPG2-211ENST00000486901 PLEKHM1Q9Y4G2 1056 aa11.57□□□□□ -0.56
HSPG2-211ENST00000486901 OR1A2Q9Y585 309 aa11.57□□□□□ -0.56
HSPG2-211ENST00000486901 FAM186AA6NE01 2351 aa11.57□□□□□ -0.56
HSPG2-211ENST00000486901 TCRBV16S1A1N1A0A5B0 115 aa11.57□□□□□ -0.56
HSPG2-211ENST00000486901 ZNF860A6NHJ4 632 aa11.57□□□□□ -0.56
HSPG2-211ENST00000486901 RNF13O43567 381 aa11.57□□□□□ -0.56
HSPG2-211ENST00000486901 WNT1P04628 370 aa11.57□□□□□ -0.56
HSPG2-211ENST00000486901 C8AP07357 584 aa11.57□□□□□ -0.56
HSPG2-211ENST00000486901 CERS1P27544 350 aa11.57□□□□□ -0.56
HSPG2-211ENST00000486901 SLC6A1P30531 599 aa11.57□□□□□ -0.56
HSPG2-211ENST00000486901 PKLRP30613 574 aa11.57□□□□□ -0.56
HSPG2-211ENST00000486901 RGS1Q08116 209 aa11.57□□□□□ -0.56
HSPG2-211ENST00000486901 C1orf94Q6P1W5 598 aa11.57□□□□□ -0.56
HSPG2-211ENST00000486901 TMEM65Q6PI78 240 aa11.57□□□□□ -0.56
HSPG2-211ENST00000486901 ARIH2OSQ8N7S6 290 aa11.57□□□□□ -0.56
HSPG2-211ENST00000486901 C4orf36Q96KX1 117 aa11.57□□□□□ -0.56
HSPG2-211ENST00000486901 AMDHD1Q96NU7 426 aa11.57□□□□□ -0.56
HSPG2-211ENST00000486901 A4GALTQ9NPC4 353 aa11.57□□□□□ -0.56
HSPG2-211ENST00000486901 KCNK6Q9Y257 313 aa11.57□□□□□ -0.56
HSPG2-211ENST00000486901 PLXNB3Q9ULL4 1909 aa11.57□□□□□ -0.56
HSPG2-211ENST00000486901 FOXE1O00358 373 aaPredicted RBP11.56□□□□□ -0.56
HSPG2-211ENST00000486901 IMPA2O14732 288 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 NDUFS4O43181 175 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 PROM1O43490 865 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 FZD7O75084 574 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 OR5F1O95221 314 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 ANXA3P12429 323 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 BTCP35070 178 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 PITPNBP48739 271 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 C21orf58P58505 322 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 KIAA1024LP59773 190 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 TSPAN5P62079 268 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 SLC25A25Q6KCM7 469 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 SLC16A11Q8NCK7 471 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 THAP4Q8WY91 577 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 OVCA2Q8WZ82 227 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 ZNF689Q96CS4 500 aaPredicted RBP11.56□□□□□ -0.56
HSPG2-211ENST00000486901 AHSPQ9NZD4 102 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 IL36AQ9UHA7 158 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 TMEM129A0AVI4 362 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 GMDSO60547 372 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 FGBP02675 491 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 RAF1P04049 648 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 SAGP10523 405 aaPredicted RBP11.56□□□□□ -0.56
HSPG2-211ENST00000486901 PDX1P52945 283 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 FGL2Q14314 439 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 TMEM255AQ5JRV8 349 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 HES5Q5TA89 166 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 PLPP4Q5VZY2 271 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 SFXN4Q6P4A7 337 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 Q6ZTK2 550 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 LINGO2Q7L985 606 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 UBE3DQ7Z6J8 389 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 CXorf40BQ96DE9 158 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 CNRIP1Q96F85 164 aaPredicted RBP11.56□□□□□ -0.56
HSPG2-211ENST00000486901 ATP6V1G2-DDX39BF2Z307 99 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 THY1P04216 161 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 ACADMP11310 421 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 VEGFCP49767 419 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 MAP2K6P52564 334 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 SMIM11AP58511 58 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 TGM3Q08188 693 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 KRT33BQ14525 404 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 SSX6Q7RTT6 188 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 OR2T4Q8NH00 348 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 PIGXQ8TBF5 258 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 DNAJA4Q8WW22 397 aaPredicted RBP11.56□□□□□ -0.56
HSPG2-211ENST00000486901 DERL3Q96Q80 235 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 SGPP1Q9BX95 441 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 FN3KQ9H479 309 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 SLC35C2Q9NQQ7 365 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 HCN3Q9P1Z3 774 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 KLHL42Q9P2K6 505 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 CBLCQ9ULV8 474 aa11.56□□□□□ -0.56
HSPG2-211ENST00000486901 EXOSC1Q9Y3B2 195 aaKnown RBP11.56□□□□□ -0.56
HSPG2-211ENST00000486901 QSOX1O00391 747 aa11.55□□□□□ -0.56
HSPG2-211ENST00000486901 SOD2P04179 222 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms