RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 PEX5LQ8IYB4 626 aa10.42□□□□□ -0.74
NUP50-216ENST00000486184 CISD2Q8N5K1 135 aaKnown RBP10.42□□□□□ -0.74
NUP50-216ENST00000486184 Q8NA96 180 aa10.42□□□□□ -0.74
NUP50-216ENST00000486184 GATSQ8NAP1 163 aa10.42□□□□□ -0.74
NUP50-216ENST00000486184 ZFP62Q8NB50 900 aaPredicted RBP10.42□□□□□ -0.74
NUP50-216ENST00000486184 OR4K17Q8NGC6 315 aa10.42□□□□□ -0.74
NUP50-216ENST00000486184 OR4C3Q8NH37 302 aa10.42□□□□□ -0.74
NUP50-216ENST00000486184 PHOSPHO1Q8TCT1 267 aa10.42□□□□□ -0.74
NUP50-216ENST00000486184 SLC38A5Q8WUX1 472 aa10.42□□□□□ -0.74
NUP50-216ENST00000486184 OIT3Q8WWZ8 545 aa10.42□□□□□ -0.74
NUP50-216ENST00000486184 MAL2Q969L2 176 aa10.42□□□□□ -0.74
NUP50-216ENST00000486184 ZNF607Q96SK3 696 aa10.42□□□□□ -0.74
NUP50-216ENST00000486184 TTTY12Q9BZ98 90 aa10.42□□□□□ -0.74
NUP50-216ENST00000486184 PIF1Q9H611 641 aa10.42□□□□□ -0.74
NUP50-216ENST00000486184 TMEM38AQ9H6F2 299 aa10.42□□□□□ -0.74
NUP50-216ENST00000486184 KAT8Q9H7Z6 458 aaKnown RBP10.42□□□□□ -0.74
NUP50-216ENST00000486184 ZFP64Q9NPA5 681 aa10.42□□□□□ -0.74
NUP50-216ENST00000486184 SPAG4Q9NPE6 437 aa10.42□□□□□ -0.74
NUP50-216ENST00000486184 OLAHQ9NV23 265 aa10.42□□□□□ -0.74
NUP50-216ENST00000486184 ADA2Q9NZK5 511 aa10.42□□□□□ -0.74
NUP50-216ENST00000486184 FLRT3Q9NZU0 649 aa10.42□□□□□ -0.74
NUP50-216ENST00000486184 DTNAQ9Y4J8 743 aa10.42□□□□□ -0.74
NUP50-216ENST00000486184 ATRXP46100 2492 aa10.42□□□□□ -0.74
NUP50-216ENST00000486184 ATMQ13315 3056 aa10.42□□□□□ -0.74
NUP50-216ENST00000486184 A0A1W2PQD3 144 aa10.41□□□□□ -0.74
NUP50-216ENST00000486184 CCT8L1PA6NM43 557 aa10.41□□□□□ -0.74
NUP50-216ENST00000486184 B2RBV5 119 aa10.41□□□□□ -0.74
NUP50-216ENST00000486184 ALG1L2C9J202 215 aa10.41□□□□□ -0.74
NUP50-216ENST00000486184 FAM47E-STBD1D6RA91 191 aa10.41□□□□□ -0.74
NUP50-216ENST00000486184 TRIM3O75382 744 aaPredicted RBP10.41□□□□□ -0.74
NUP50-216ENST00000486184 PDE9AO76083 593 aa10.41□□□□□ -0.74
NUP50-216ENST00000486184 PRB1P04280 392 aa10.41□□□□□ -0.74
NUP50-216ENST00000486184 DBIP07108 87 aaKnown RBP10.41□□□□□ -0.74
NUP50-216ENST00000486184 IL7RP16871 459 aa10.41□□□□□ -0.74
NUP50-216ENST00000486184 GDF1P27539 372 aa10.41□□□□□ -0.74
NUP50-216ENST00000486184 SLC7A2P52569 658 aa10.41□□□□□ -0.74
NUP50-216ENST00000486184 PPIAP62937 165 aaKnown RBP10.41□□□□□ -0.74
NUP50-216ENST00000486184 INPP5JQ15735 1006 aaPredicted RBP10.41□□□□□ -0.74
NUP50-216ENST00000486184 SOWAHCQ53LP3 525 aaPredicted RBP10.41□□□□□ -0.74
NUP50-216ENST00000486184 RPS26P11Q5JNZ5 115 aaPredicted RBP10.41□□□□□ -0.74
NUP50-216ENST00000486184 INTS11Q5TA45 600 aaKnown RBP10.41□□□□□ -0.74
NUP50-216ENST00000486184 PRAMEF8Q5VWM4 474 aa10.41□□□□□ -0.74
NUP50-216ENST00000486184 PRAMEF7Q5VXH5 474 aa10.41□□□□□ -0.74
NUP50-216ENST00000486184 IFNEQ86WN2 208 aa10.41□□□□□ -0.74
NUP50-216ENST00000486184 PGAM4Q8N0Y7 254 aa10.41□□□□□ -0.74
NUP50-216ENST00000486184 TMCO5AQ8N6Q1 288 aa10.41□□□□□ -0.74
NUP50-216ENST00000486184 HIPK4Q8NE63 616 aa10.41□□□□□ -0.74
NUP50-216ENST00000486184 OR2T12Q8NG77 320 aa10.41□□□□□ -0.74
NUP50-216ENST00000486184 WDR60Q8WVS4 1066 aa10.41□□□□□ -0.74
NUP50-216ENST00000486184 FRMD6Q96NE9 622 aa10.41□□□□□ -0.74
NUP50-216ENST00000486184 TREX2Q9BQ50 279 aaPredicted RBP10.41□□□□□ -0.74
NUP50-216ENST00000486184 GPATCH1Q9BRR8 931 aaKnown RBP10.41□□□□□ -0.74
NUP50-216ENST00000486184 SPATA5L1Q9BVQ7 753 aa10.41□□□□□ -0.74
NUP50-216ENST00000486184 SAP130Q9H0E3 1048 aa10.41□□□□□ -0.74
NUP50-216ENST00000486184 SLC38A1Q9H2H9 487 aa10.41□□□□□ -0.74
NUP50-216ENST00000486184 ARMC7Q9H6L4 198 aa10.41□□□□□ -0.74
NUP50-216ENST00000486184 PTGES2Q9H7Z7 377 aa10.41□□□□□ -0.74
NUP50-216ENST00000486184 MTHFD2LQ9H903 347 aaPredicted RBP10.41□□□□□ -0.74
NUP50-216ENST00000486184 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.41□□□□□ -0.74
NUP50-216ENST00000486184 SUCOQ9UBS9 1254 aaKnown RBP10.41□□□□□ -0.74
NUP50-216ENST00000486184 DKKL1Q9UK85 242 aa10.41□□□□□ -0.74
NUP50-216ENST00000486184 ZNF232Q9UNY5 417 aa10.41□□□□□ -0.74
NUP50-216ENST00000486184 FREM3P0C091 2139 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 PRAMEF27A3QJZ7 478 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 PINLYPA6NC86 204 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 FAM220BPB1ANY3 271 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 B8ZZF3 427 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 GSTA4O15217 222 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 DNAJA2O60884 412 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 SERPINB7O75635 380 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 UGT2B17O75795 530 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 CBR3O75828 277 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 TRAPPC6AO75865 159 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 CYP7B1O75881 506 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 UBOX5O94941 541 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 NUDT14O95848 222 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 CSTAP01040 98 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 UBL4AP11441 157 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 PCGF2P35227 344 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 GCKP35557 465 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 PTGDSP41222 190 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 RNF144AP50876 292 aaPredicted RBP10.4□□□□□ -0.74
NUP50-216ENST00000486184 SLC25A3Q00325 362 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 LIPEQ05469 1076 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 LARS2Q15031 903 aaKnown RBP10.4□□□□□ -0.74
NUP50-216ENST00000486184 ZNF141Q15928 474 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 VMACQ2NL98 169 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 LIN52Q52LA3 116 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 KLHL26Q53HC5 615 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 TIGD3Q6B0B8 471 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 OR5M10Q6IEU7 315 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 EIF3MQ7L2H7 374 aaKnown RBP10.4□□□□□ -0.74
NUP50-216ENST00000486184 NET1Q7Z628 596 aaPredicted RBP10.4□□□□□ -0.74
NUP50-216ENST00000486184 HMGN2P46Q86SG4 172 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 PLCZ1Q86YW0 608 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 ZZZ3Q8IYH5 903 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 C10orf111Q8N326 155 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 FAM109AQ8N4B1 249 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 TNIP2Q8NFZ5 429 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 OR52P1PQ8NH57 321 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms