RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 PTGFRNQ9P2B2 879 aa18.35■□□□□ 0.53
LIMS2-215ENST00000484252 CSNK1G3Q9Y6M4 447 aa18.35■□□□□ 0.53
LIMS2-215ENST00000484252 ZNF888P0CJ79 500 aaPredicted RBP18.35■□□□□ 0.53
LIMS2-215ENST00000484252 CCDC58Q4VC31 144 aa18.35■□□□□ 0.53
LIMS2-215ENST00000484252 EOGTQ5NDL2 527 aa18.35■□□□□ 0.53
LIMS2-215ENST00000484252 NOXA1Q86UR1 476 aa18.35■□□□□ 0.53
LIMS2-215ENST00000484252 CPOQ8IVL8 374 aa18.35■□□□□ 0.53
LIMS2-215ENST00000484252 RNF113BQ8IZP6 322 aaKnown RBP18.35■□□□□ 0.53
LIMS2-215ENST00000484252 KCT2Q8NC54 265 aa18.35■□□□□ 0.53
LIMS2-215ENST00000484252 BBS1Q8NFJ9 593 aa18.35■□□□□ 0.53
LIMS2-215ENST00000484252 LCN9Q8WX39 176 aa18.35■□□□□ 0.53
LIMS2-215ENST00000484252 HERVK_113Q902F9 699 aa18.35■□□□□ 0.53
LIMS2-215ENST00000484252 OTULINQ96BN8 352 aa18.35■□□□□ 0.53
LIMS2-215ENST00000484252 RIPOR3Q96MK2 946 aa18.35■□□□□ 0.53
LIMS2-215ENST00000484252 GDF15Q99988 308 aa18.35■□□□□ 0.53
LIMS2-215ENST00000484252 KCNN2Q9H2S1 579 aa18.35■□□□□ 0.53
LIMS2-215ENST00000484252 NUFIP1Q9UHK0 495 aaKnown RBP18.35■□□□□ 0.53
LIMS2-215ENST00000484252 UNC119BA6NIH7 251 aa18.34■□□□□ 0.53
LIMS2-215ENST00000484252 RGS9O75916 674 aaPredicted RBP18.34■□□□□ 0.53
LIMS2-215ENST00000484252 CSF2P04141 144 aa18.34■□□□□ 0.53
LIMS2-215ENST00000484252 EEF1A1P68104 462 aaKnown RBP18.34■□□□□ 0.53
LIMS2-215ENST00000484252 IL18Q14116 193 aa18.34■□□□□ 0.53
LIMS2-215ENST00000484252 SLC22A18Q96BI1 424 aa18.34■□□□□ 0.53
LIMS2-215ENST00000484252 RNF170Q96K19 258 aa18.34■□□□□ 0.53
LIMS2-215ENST00000484252 SERINC2Q96SA4 455 aa18.34■□□□□ 0.53
LIMS2-215ENST00000484252 DCLRE1CQ96SD1 692 aaKnown RBP18.34■□□□□ 0.53
LIMS2-215ENST00000484252 TMEM43Q9BTV4 400 aa18.34■□□□□ 0.53
LIMS2-215ENST00000484252 C6orf106Q9H6K1 298 aaPredicted RBP18.34■□□□□ 0.53
LIMS2-215ENST00000484252 KIAA0100Q14667 2235 aaKnown RBP18.34■□□□□ 0.53
LIMS2-215ENST00000484252 TRAPPC13A5PLN9 417 aa18.34■□□□□ 0.53
LIMS2-215ENST00000484252 PRR23AA6NEV1 266 aa18.34■□□□□ 0.53
LIMS2-215ENST00000484252 SGK494L7N484 410 aa18.34■□□□□ 0.53
LIMS2-215ENST00000484252 SOCS6O14544 535 aa18.34■□□□□ 0.53
LIMS2-215ENST00000484252 CDC42EP2O14613 210 aa18.34■□□□□ 0.53
LIMS2-215ENST00000484252 PLRG1O43660 514 aaKnown RBP18.34■□□□□ 0.53
LIMS2-215ENST00000484252 CRYZL1O95825 349 aa18.34■□□□□ 0.53
LIMS2-215ENST00000484252 SLC35G6P0C7Q6 338 aa18.34■□□□□ 0.53
LIMS2-215ENST00000484252 PAICSP22234 425 aaKnown RBP18.34■□□□□ 0.53
LIMS2-215ENST00000484252 MTNR1BP49286 362 aa18.34■□□□□ 0.53
LIMS2-215ENST00000484252 ZNF136P52737 540 aa18.34■□□□□ 0.53
LIMS2-215ENST00000484252 SUZ12Q15022 739 aaKnown RBP18.34■□□□□ 0.53
LIMS2-215ENST00000484252 VASNQ6EMK4 673 aa18.34■□□□□ 0.53
LIMS2-215ENST00000484252 KLBQ86Z14 1044 aa18.34■□□□□ 0.53
LIMS2-215ENST00000484252 YAF2Q8IY57 180 aa18.34■□□□□ 0.53
LIMS2-215ENST00000484252 ACBD7Q8N6N7 88 aa18.34■□□□□ 0.53
LIMS2-215ENST00000484252 OR4E2Q8NGC2 313 aa18.34■□□□□ 0.53
LIMS2-215ENST00000484252 OR52L1Q8NGH7 329 aa18.34■□□□□ 0.53
LIMS2-215ENST00000484252 OR2M4Q96R27 311 aa18.34■□□□□ 0.53
LIMS2-215ENST00000484252 KLF15Q9UIH9 416 aa18.34■□□□□ 0.53
LIMS2-215ENST00000484252 KLHL21Q9UJP4 597 aa18.34■□□□□ 0.53
LIMS2-215ENST00000484252 CHD7Q9P2D1 2997 aa18.33■□□□□ 0.53
LIMS2-215ENST00000484252 A0A0B4J293 547 aa18.33■□□□□ 0.52
LIMS2-215ENST00000484252 RNF13O43567 381 aa18.33■□□□□ 0.52
LIMS2-215ENST00000484252 SLC2A10O95528 541 aa18.33■□□□□ 0.52
LIMS2-215ENST00000484252 TLX1P31314 330 aaPredicted RBP18.33■□□□□ 0.52
LIMS2-215ENST00000484252 SF3A2Q15428 464 aaKnown RBP18.33■□□□□ 0.52
LIMS2-215ENST00000484252 TIGD3Q6B0B8 471 aa18.33■□□□□ 0.52
LIMS2-215ENST00000484252 RPL13AP3Q6NVV1 102 aa18.33■□□□□ 0.52
LIMS2-215ENST00000484252 NIPAL3Q6P499 406 aa18.33■□□□□ 0.52
LIMS2-215ENST00000484252 MEPCEQ7L2J0 689 aaKnown RBP18.33■□□□□ 0.52
LIMS2-215ENST00000484252 TCTE3Q8IZS6 198 aa18.33■□□□□ 0.52
LIMS2-215ENST00000484252 SIRT6Q8N6T7 355 aa18.33■□□□□ 0.52
LIMS2-215ENST00000484252 OR14C36Q8NHC7 312 aa18.33■□□□□ 0.52
LIMS2-215ENST00000484252 UBASH3BQ8TF42 649 aa18.33■□□□□ 0.52
LIMS2-215ENST00000484252 COL26A1Q96A83 441 aa18.33■□□□□ 0.52
LIMS2-215ENST00000484252 RNF31Q96EP0 1072 aa18.33■□□□□ 0.52
LIMS2-215ENST00000484252 RNF32Q9H0A6 362 aa18.33■□□□□ 0.52
LIMS2-215ENST00000484252 RANGRFQ9HD47 186 aaPredicted RBP18.33■□□□□ 0.52
LIMS2-215ENST00000484252 INPP5EQ9NRR6 644 aa18.33■□□□□ 0.52
LIMS2-215ENST00000484252 BABAM2Q9NXR7 383 aa18.33■□□□□ 0.52
LIMS2-215ENST00000484252 KCMF1Q9P0J7 381 aa18.33■□□□□ 0.52
LIMS2-215ENST00000484252 MAU2Q9Y6X3 613 aa18.33■□□□□ 0.52
LIMS2-215ENST00000484252 CD8B2A6NJW9 211 aa18.32■□□□□ 0.52
LIMS2-215ENST00000484252 GTPBP1O00178 669 aaKnown RBP18.32■□□□□ 0.52
LIMS2-215ENST00000484252 DBIP07108 87 aaKnown RBP18.32■□□□□ 0.52
LIMS2-215ENST00000484252 CD8BP10966 210 aa18.32■□□□□ 0.52
LIMS2-215ENST00000484252 CD53P19397 219 aa18.32■□□□□ 0.52
LIMS2-215ENST00000484252 DUSP5Q16690 384 aa18.32■□□□□ 0.52
LIMS2-215ENST00000484252 TMEM91Q6ZNR0 172 aa18.32■□□□□ 0.52
LIMS2-215ENST00000484252 USP53Q70EK8 1073 aa18.32■□□□□ 0.52
LIMS2-215ENST00000484252 OR51G2Q8NGK0 314 aa18.32■□□□□ 0.52
LIMS2-215ENST00000484252 FANK1Q8TC84 345 aa18.32■□□□□ 0.52
LIMS2-215ENST00000484252 TTC9Q92623 222 aa18.32■□□□□ 0.52
LIMS2-215ENST00000484252 FAM131CQ96AQ9 280 aa18.32■□□□□ 0.52
LIMS2-215ENST00000484252 CD180Q99467 661 aa18.32■□□□□ 0.52
LIMS2-215ENST00000484252 SDF2Q99470 211 aa18.32■□□□□ 0.52
LIMS2-215ENST00000484252 PRSS27Q9BQR3 290 aa18.32■□□□□ 0.52
LIMS2-215ENST00000484252 TMEM246Q9BRR3 403 aa18.32■□□□□ 0.52
LIMS2-215ENST00000484252 OR52D1Q9H346 318 aa18.32■□□□□ 0.52
LIMS2-215ENST00000484252 PIGUQ9H490 435 aa18.32■□□□□ 0.52
LIMS2-215ENST00000484252 ZNF223Q9UK11 482 aaPredicted RBP18.32■□□□□ 0.52
LIMS2-215ENST00000484252 SHISA3A0PJX4 238 aa18.32■□□□□ 0.52
LIMS2-215ENST00000484252 URADA6NGE7 173 aa18.32■□□□□ 0.52
LIMS2-215ENST00000484252 BTN3A3O00478 584 aa18.32■□□□□ 0.52
LIMS2-215ENST00000484252 LYRM1O43325 122 aa18.32■□□□□ 0.52
LIMS2-215ENST00000484252 NCR1O76036 304 aa18.32■□□□□ 0.52
LIMS2-215ENST00000484252 SMIM10L1P0DMW3 83 aa18.32■□□□□ 0.52
LIMS2-215ENST00000484252 RPS4Y1P22090 263 aaKnown RBP18.32■□□□□ 0.52
LIMS2-215ENST00000484252 INPP1P49441 399 aa18.32■□□□□ 0.52
LIMS2-215ENST00000484252 ADAM15Q13444 863 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms