RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 A0A1W2PP18 115 aa18.63■□□□□ 0.57
VARS-224ENST00000479051 FAM47E-STBD1D6RA91 191 aa18.63■□□□□ 0.57
VARS-224ENST00000479051 E9PLN8 166 aa18.63■□□□□ 0.57
VARS-224ENST00000479051 ACTL6AO96019 429 aa18.63■□□□□ 0.57
VARS-224ENST00000479051 GUSBP08236 651 aa18.63■□□□□ 0.57
VARS-224ENST00000479051 CAPN3P20807 821 aa18.63■□□□□ 0.57
VARS-224ENST00000479051 GPR68Q15743 365 aa18.63■□□□□ 0.57
VARS-224ENST00000479051 ZNF630Q2M218 657 aaPredicted RBP18.63■□□□□ 0.57
VARS-224ENST00000479051 AAGABQ6PD74 315 aa18.63■□□□□ 0.57
VARS-224ENST00000479051 APOOLQ6UXV4 268 aa18.63■□□□□ 0.57
VARS-224ENST00000479051 PM20D2Q8IYS1 436 aa18.63■□□□□ 0.57
VARS-224ENST00000479051 ZNF614Q8N883 585 aa18.63■□□□□ 0.57
VARS-224ENST00000479051 GATSQ8NAP1 163 aa18.63■□□□□ 0.57
VARS-224ENST00000479051 TSPEARQ8WU66 669 aa18.63■□□□□ 0.57
VARS-224ENST00000479051 ROPN1LQ96C74 230 aa18.63■□□□□ 0.57
VARS-224ENST00000479051 VKORC1Q9BQB6 163 aa18.63■□□□□ 0.57
VARS-224ENST00000479051 RTN4RQ9BZR6 473 aa18.63■□□□□ 0.57
VARS-224ENST00000479051 ZNF350Q9GZX5 532 aa18.63■□□□□ 0.57
VARS-224ENST00000479051 PAIP1Q9H074 479 aaKnown RBP18.63■□□□□ 0.57
VARS-224ENST00000479051 THUMPD1Q9NXG2 353 aaKnown RBP18.63■□□□□ 0.57
VARS-224ENST00000479051 LEF1Q9UJU2 399 aaPredicted RBP18.63■□□□□ 0.57
VARS-224ENST00000479051 MEMO1Q9Y316 297 aa18.63■□□□□ 0.57
VARS-224ENST00000479051 SLC6A5Q9Y345 797 aa18.63■□□□□ 0.57
VARS-224ENST00000479051 WDR45Q9Y484 360 aa18.63■□□□□ 0.57
VARS-224ENST00000479051 DTNAQ9Y4J8 743 aa18.63■□□□□ 0.57
VARS-224ENST00000479051 TMEM247A6NEH6 219 aa18.62■□□□□ 0.57
VARS-224ENST00000479051 HMGN4O00479 90 aa18.62■□□□□ 0.57
VARS-224ENST00000479051 ANGPT2O15123 496 aa18.62■□□□□ 0.57
VARS-224ENST00000479051 WDR1O75083 606 aa18.62■□□□□ 0.57
VARS-224ENST00000479051 LDLRP01130 860 aa18.62■□□□□ 0.57
VARS-224ENST00000479051 GABRA1P14867 456 aa18.62■□□□□ 0.57
VARS-224ENST00000479051 HK1P19367 917 aa18.62■□□□□ 0.57
VARS-224ENST00000479051 PPIBP23284 216 aaKnown RBP18.62■□□□□ 0.57
VARS-224ENST00000479051 CRATP43155 626 aa18.62■□□□□ 0.57
VARS-224ENST00000479051 SF3A3Q12874 501 aaKnown RBP eCLIP18.62■□□□□ 0.574e-7■■■■■ 37.6
VARS-224ENST00000479051 SF3B4Q15427 424 aaKnown RBP eCLIP18.62■□□□□ 0.578e-9■■■■■ 28.1
VARS-224ENST00000479051 GTDC1Q4AE62 458 aa18.62■□□□□ 0.57
VARS-224ENST00000479051 KLHL26Q53HC5 615 aa18.62■□□□□ 0.57
VARS-224ENST00000479051 NHSL2Q5HYW2 709 aa18.62■□□□□ 0.57
VARS-224ENST00000479051 TMEM211Q6ICI0 200 aa18.62■□□□□ 0.57
VARS-224ENST00000479051 ZNF585AQ6P3V2 769 aa18.62■□□□□ 0.57
VARS-224ENST00000479051 ENPP6Q6UWR7 440 aa18.62■□□□□ 0.57
VARS-224ENST00000479051 OR5M9Q8NGP3 310 aa18.62■□□□□ 0.57
VARS-224ENST00000479051 PHOSPHO1Q8TCT1 267 aa18.62■□□□□ 0.57
VARS-224ENST00000479051 OIT3Q8WWZ8 545 aa18.62■□□□□ 0.57
VARS-224ENST00000479051 ABTB1Q969K4 478 aaPredicted RBP18.62■□□□□ 0.57
VARS-224ENST00000479051 C1GALT1C1Q96EU7 318 aa18.62■□□□□ 0.57
VARS-224ENST00000479051 SFXN2Q96NB2 322 aa18.62■□□□□ 0.57
VARS-224ENST00000479051 TRNT1Q96Q11 434 aaKnown RBP18.62■□□□□ 0.57
VARS-224ENST00000479051 NSRP1Q9H0G5 558 aaKnown RBP18.62■□□□□ 0.57
VARS-224ENST00000479051 SLC6A13Q9NSD5 602 aa18.62■□□□□ 0.57
VARS-224ENST00000479051 PNPLA3Q9NST1 481 aa18.62■□□□□ 0.57
VARS-224ENST00000479051 P2RX2Q9UBL9 471 aa18.62■□□□□ 0.57
VARS-224ENST00000479051 TNFRSF10DQ9UBN6 386 aa18.62■□□□□ 0.57
VARS-224ENST00000479051 NDUFAF1Q9Y375 327 aa18.62■□□□□ 0.57
VARS-224ENST00000479051 PCDHB14Q9Y5E9 798 aa18.62■□□□□ 0.57
VARS-224ENST00000479051 HRH3Q9Y5N1 445 aa18.62■□□□□ 0.57
VARS-224ENST00000479051 NPIPA5A0A0B4J1W7 369 aa18.61■□□□□ 0.57
VARS-224ENST00000479051 NPIPA7E9PJI5 369 aa18.61■□□□□ 0.57
VARS-224ENST00000479051 GTPBP1O00178 669 aaKnown RBP18.61■□□□□ 0.57
VARS-224ENST00000479051 ADAM10O14672 748 aa18.61■□□□□ 0.57
VARS-224ENST00000479051 HOXD4P09016 255 aaPredicted RBP18.61■□□□□ 0.57
VARS-224ENST00000479051 NPIPA8P0DM63 369 aa18.61■□□□□ 0.57
VARS-224ENST00000479051 NR2F1P10589 423 aa18.61■□□□□ 0.57
VARS-224ENST00000479051 PTGER4P35408 488 aa18.61■□□□□ 0.57
VARS-224ENST00000479051 SMSP52788 366 aa18.61■□□□□ 0.57
VARS-224ENST00000479051 CRYZQ08257 329 aaKnown RBP18.61■□□□□ 0.57
VARS-224ENST00000479051 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.61■□□□□ 0.57
VARS-224ENST00000479051 LRIF1Q5T3J3 769 aa18.61■□□□□ 0.57
VARS-224ENST00000479051 RPTNQ6XPR3 784 aa18.61■□□□□ 0.57
VARS-224ENST00000479051 ZNF619Q8N2I2 560 aa18.61■□□□□ 0.57
VARS-224ENST00000479051 PHF10Q8WUB8 498 aaKnown RBP18.61■□□□□ 0.57
VARS-224ENST00000479051 CCDC120Q96HB5 630 aa18.61■□□□□ 0.57
VARS-224ENST00000479051 ALKBH4Q9NXW9 302 aa18.61■□□□□ 0.57
VARS-224ENST00000479051 MKLN1Q9UL63 735 aa18.61■□□□□ 0.57
VARS-224ENST00000479051 NPIPB9F8W1W9 429 aa18.6■□□□□ 0.57
VARS-224ENST00000479051 CLIC1O00299 241 aa18.6■□□□□ 0.57
VARS-224ENST00000479051 HCRTR2O43614 444 aa18.6■□□□□ 0.57
VARS-224ENST00000479051 KIAA0513O60268 411 aa18.6■□□□□ 0.57
VARS-224ENST00000479051 FCMRO60667 390 aa18.6■□□□□ 0.57
VARS-224ENST00000479051 SNRPB2P08579 225 aaKnown RBP18.6■□□□□ 0.57
VARS-224ENST00000479051 BMP7P18075 431 aa18.6■□□□□ 0.57
VARS-224ENST00000479051 ACVR2AP27037 513 aa18.6■□□□□ 0.57
VARS-224ENST00000479051 ZNF41P51814 821 aaPredicted RBP18.6■□□□□ 0.57
VARS-224ENST00000479051 DSTNP60981 165 aa18.6■□□□□ 0.57
VARS-224ENST00000479051 FADDQ13158 208 aa18.6■□□□□ 0.57
VARS-224ENST00000479051 GNA13Q14344 377 aa18.6■□□□□ 0.57
VARS-224ENST00000479051 MAPRE2Q15555 327 aa18.6■□□□□ 0.57
VARS-224ENST00000479051 ZNF141Q15928 474 aa18.6■□□□□ 0.57
VARS-224ENST00000479051 GLYR1Q49A26 553 aaPredicted RBP18.6■□□□□ 0.57
VARS-224ENST00000479051 COX20Q5RI15 118 aa18.6■□□□□ 0.57
VARS-224ENST00000479051 RAET1LQ5VY80 246 aa18.6■□□□□ 0.57
VARS-224ENST00000479051 VASNQ6EMK4 673 aa18.6■□□□□ 0.57
VARS-224ENST00000479051 C3P1Q6ZMU1 363 aa18.6■□□□□ 0.57
VARS-224ENST00000479051 B4GALNT2Q8NHY0 566 aa18.6■□□□□ 0.57
VARS-224ENST00000479051 AURKBQ96GD4 344 aaPredicted RBP18.6■□□□□ 0.57
VARS-224ENST00000479051 SH3YL1Q96HL8 342 aaPredicted RBP18.6■□□□□ 0.57
VARS-224ENST00000479051 TIMP4Q99727 224 aa18.6■□□□□ 0.57
VARS-224ENST00000479051 UGT2B28Q9BY64 529 aa18.6■□□□□ 0.57
VARS-224ENST00000479051 SLC52A3Q9NQ40 469 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms