RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 A0A087WV62 115 aa13.23□□□□□ -0.29
USP11-207ENST00000478596 ERN1O75460 977 aaKnown RBP13.23□□□□□ -0.29
USP11-207ENST00000478596 KRT75O95678 551 aa13.23□□□□□ -0.29
USP11-207ENST00000478596 KRT16P08779 473 aa13.23□□□□□ -0.29
USP11-207ENST00000478596 PRIM2P49643 509 aa13.23□□□□□ -0.29
USP11-207ENST00000478596 KHKP50053 298 aa13.23□□□□□ -0.29
USP11-207ENST00000478596 MNAT1P51948 309 aa13.23□□□□□ -0.29
USP11-207ENST00000478596 GABPB1Q06547 395 aaPredicted RBP13.23□□□□□ -0.29
USP11-207ENST00000478596 CAPRIN1Q14444 709 aaKnown RBP13.23□□□□□ -0.29
USP11-207ENST00000478596 LASP1Q14847 261 aaKnown RBP13.23□□□□□ -0.29
USP11-207ENST00000478596 PAGE3Q5JUK9 113 aa13.23□□□□□ -0.29
USP11-207ENST00000478596 C1orf185Q5T7R7 199 aa13.23□□□□□ -0.29
USP11-207ENST00000478596 HEPHL1Q6MZM0 1159 aa13.23□□□□□ -0.29
USP11-207ENST00000478596 CLEC4FQ8N1N0 589 aa13.23□□□□□ -0.29
USP11-207ENST00000478596 KIF2BQ8N4N8 673 aa13.23□□□□□ -0.29
USP11-207ENST00000478596 ZNF321PQ8N8H1 164 aa13.23□□□□□ -0.29
USP11-207ENST00000478596 SLC9A6Q92581 669 aa13.23□□□□□ -0.29
USP11-207ENST00000478596 GTF2H4Q92759 462 aa13.23□□□□□ -0.29
USP11-207ENST00000478596 RAD21L1Q9H4I0 556 aa13.23□□□□□ -0.29
USP11-207ENST00000478596 EFCAB1Q9HAE3 211 aa13.23□□□□□ -0.29
USP11-207ENST00000478596 SIRT3Q9NTG7 399 aaPredicted RBP13.23□□□□□ -0.29
USP11-207ENST00000478596 ARL8BQ9NVJ2 186 aa13.23□□□□□ -0.29
USP11-207ENST00000478596 OR10H1Q9Y4A9 318 aa13.23□□□□□ -0.29
USP11-207ENST00000478596 MEGF8Q7Z7M0 2845 aa13.23□□□□□ -0.29
USP11-207ENST00000478596 A0A1B0GVC2 190 aa13.22□□□□□ -0.29
USP11-207ENST00000478596 CCT8L1PA6NM43 557 aa13.22□□□□□ -0.29
USP11-207ENST00000478596 OR6C76A6NM76 312 aa13.22□□□□□ -0.29
USP11-207ENST00000478596 HSPB2A8KAH6 182 aa13.22□□□□□ -0.29
USP11-207ENST00000478596 CAPN14A8MX76 684 aa13.22□□□□□ -0.29
USP11-207ENST00000478596 EVPLLA8MZ36 301 aa13.22□□□□□ -0.29
USP11-207ENST00000478596 UPK1AO00322 258 aa13.22□□□□□ -0.29
USP11-207ENST00000478596 PLOD2O00469 737 aa13.22□□□□□ -0.29
USP11-207ENST00000478596 FBP2O00757 339 aa13.22□□□□□ -0.29
USP11-207ENST00000478596 PLOD3O60568 738 aa13.22□□□□□ -0.29
USP11-207ENST00000478596 UBOX5O94941 541 aa13.22□□□□□ -0.29
USP11-207ENST00000478596 CNOT4O95628 575 aaKnown RBP13.22□□□□□ -0.29
USP11-207ENST00000478596 CBX7O95931 251 aa13.22□□□□□ -0.29
USP11-207ENST00000478596 IGHG3P01860 377 aa13.22□□□□□ -0.29
USP11-207ENST00000478596 PPIBP23284 216 aaKnown RBP13.22□□□□□ -0.29
USP11-207ENST00000478596 GPR85P60893 370 aa13.22□□□□□ -0.29
USP11-207ENST00000478596 RPS26P62854 115 aaKnown RBP13.22□□□□□ -0.29
USP11-207ENST00000478596 HPCAP84074 193 aa13.22□□□□□ -0.29
USP11-207ENST00000478596 SORDQ00796 357 aa13.22□□□□□ -0.29
USP11-207ENST00000478596 KRT72Q14CN4 511 aa13.22□□□□□ -0.29
USP11-207ENST00000478596 HSPB2Q16082 182 aa13.22□□□□□ -0.29
USP11-207ENST00000478596 GTDC1Q4AE62 458 aa13.22□□□□□ -0.29
USP11-207ENST00000478596 COQ5Q5HYK3 327 aa13.22□□□□□ -0.29
USP11-207ENST00000478596 FAM91A1Q658Y4 838 aa13.22□□□□□ -0.29
USP11-207ENST00000478596 RETREG3Q86VR2 466 aa13.22□□□□□ -0.29
USP11-207ENST00000478596 KIF18BQ86Y91 864 aa13.22□□□□□ -0.29
USP11-207ENST00000478596 OR2L13Q8N349 312 aa13.22□□□□□ -0.29
USP11-207ENST00000478596 OR5L2Q8NGL0 311 aa13.22□□□□□ -0.29
USP11-207ENST00000478596 ZNF721Q8TF20 911 aa13.22□□□□□ -0.29
USP11-207ENST00000478596 SMPDL3BQ92485 455 aa13.22□□□□□ -0.29
USP11-207ENST00000478596 OTUB1Q96FW1 271 aaPredicted RBP13.22□□□□□ -0.29
USP11-207ENST00000478596 AURKBQ96GD4 344 aaPredicted RBP13.22□□□□□ -0.29
USP11-207ENST00000478596 NSL1Q96IY1 281 aa13.22□□□□□ -0.29
USP11-207ENST00000478596 YIPF4Q9BSR8 244 aa13.22□□□□□ -0.29
USP11-207ENST00000478596 ITPAQ9BY32 194 aa13.22□□□□□ -0.29
USP11-207ENST00000478596 FOLH1BQ9HBA9 442 aa13.22□□□□□ -0.29
USP11-207ENST00000478596 SERHLQ9NQF3 203 aa13.22□□□□□ -0.29
USP11-207ENST00000478596 NDE1Q9NXR1 346 aa13.22□□□□□ -0.29
USP11-207ENST00000478596 C19orf53Q9UNZ5 99 aaPredicted RBP13.22□□□□□ -0.29
USP11-207ENST00000478596 CORO2BQ9UQ03 480 aa13.22□□□□□ -0.29
USP11-207ENST00000478596 ARID1AO14497 2285 aa13.22□□□□□ -0.29
USP11-207ENST00000478596 C15orf38-AP3S2A0A0A6YYH1 394 aa13.21□□□□□ -0.29
USP11-207ENST00000478596 C2orf92A0A1B0GVN3 265 aa13.21□□□□□ -0.29
USP11-207ENST00000478596 TMEM247A6NEH6 219 aa13.21□□□□□ -0.29
USP11-207ENST00000478596 EBAG9O00559 213 aa13.21□□□□□ -0.29
USP11-207ENST00000478596 DVL2O14641 736 aa13.21□□□□□ -0.29
USP11-207ENST00000478596 SCN2BO60939 215 aa13.21□□□□□ -0.29
USP11-207ENST00000478596 ZFAND5O76080 213 aa13.21□□□□□ -0.29
USP11-207ENST00000478596 ALOX5P09917 674 aa13.21□□□□□ -0.29
USP11-207ENST00000478596 CALB2P22676 271 aa13.21□□□□□ -0.29
USP11-207ENST00000478596 KRT20P35900 424 aa13.21□□□□□ -0.29
USP11-207ENST00000478596 CRATP43155 626 aa13.21□□□□□ -0.29
USP11-207ENST00000478596 RFX3P48380 749 aa13.21□□□□□ -0.29
USP11-207ENST00000478596 CASP9P55211 416 aa13.21□□□□□ -0.29
USP11-207ENST00000478596 SLC37A1P57057 533 aa13.21□□□□□ -0.29
USP11-207ENST00000478596 PPIAP62937 165 aaKnown RBP13.21□□□□□ -0.29
USP11-207ENST00000478596 DMTNQ08495 405 aa13.21□□□□□ -0.29
USP11-207ENST00000478596 FUT7Q11130 342 aa13.21□□□□□ -0.29
USP11-207ENST00000478596 TNFAIP8L2Q6P589 184 aaPredicted RBP13.21□□□□□ -0.29
USP11-207ENST00000478596 CCDC121Q6ZUS5 278 aa13.21□□□□□ -0.29
USP11-207ENST00000478596 ARPINQ7Z6K5 226 aa13.21□□□□□ -0.29
USP11-207ENST00000478596 RNF130Q86XS8 419 aa13.21□□□□□ -0.29
USP11-207ENST00000478596 HIPK1Q86Z02 1210 aa13.21□□□□□ -0.29
USP11-207ENST00000478596 C9orf40Q8IXQ3 194 aa13.21□□□□□ -0.29
USP11-207ENST00000478596 COX18Q8N8Q8 333 aa13.21□□□□□ -0.29
USP11-207ENST00000478596 NFAM1Q8NET5 270 aaPredicted RBP13.21□□□□□ -0.29
USP11-207ENST00000478596 LINC01560Q8TB33 94 aa13.21□□□□□ -0.29
USP11-207ENST00000478596 ROPN1LQ96C74 230 aa13.21□□□□□ -0.29
USP11-207ENST00000478596 CGREF1Q99674 301 aa13.21□□□□□ -0.29
USP11-207ENST00000478596 SLC39A3Q9BRY0 314 aa13.21□□□□□ -0.29
USP11-207ENST00000478596 WWTR1Q9GZV5 400 aa13.21□□□□□ -0.29
USP11-207ENST00000478596 PAIP1Q9H074 479 aaKnown RBP13.21□□□□□ -0.29
USP11-207ENST00000478596 Q9N2J8 555 aa13.21□□□□□ -0.29
USP11-207ENST00000478596 PCDHB14Q9Y5E9 798 aa13.21□□□□□ -0.29
USP11-207ENST00000478596 EXPH5Q8NEV8 1989 aa13.21□□□□□ -0.29
USP11-207ENST00000478596 ACOT7O00154 380 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms