RNA–Protein interactions for RNA: ENST00000474691.1

EPCAM-205, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 714 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-205ENST00000474691 IFT81Q8WYA0 676 aa12.36□□□□□ -0.43
EPCAM-205ENST00000474691 ZBTB8AQ96BR9 441 aa12.36□□□□□ -0.43
EPCAM-205ENST00000474691 LMF2Q9BU23 707 aaKnown RBP12.36□□□□□ -0.43
EPCAM-205ENST00000474691 CDC42EP4Q9H3Q1 356 aaKnown RBP12.36□□□□□ -0.43
EPCAM-205ENST00000474691 GLIPR2Q9H4G4 154 aa12.36□□□□□ -0.43
EPCAM-205ENST00000474691 FAIMQ9NVQ4 179 aa12.36□□□□□ -0.43
EPCAM-205ENST00000474691 ZNF180Q9UJW8 692 aa12.36□□□□□ -0.43
EPCAM-205ENST00000474691 ZNF225Q9UK10 706 aa12.36□□□□□ -0.43
EPCAM-205ENST00000474691 WBP11Q9Y2W2 641 aaKnown RBP12.36□□□□□ -0.43
EPCAM-205ENST00000474691 EXOC1LA0A1B0GW35 172 aa12.35□□□□□ -0.43
EPCAM-205ENST00000474691 GJE1A6NN92 205 aa12.35□□□□□ -0.43
EPCAM-205ENST00000474691 SCDO00767 359 aa12.35□□□□□ -0.43
EPCAM-205ENST00000474691 TLX2O43763 284 aaPredicted RBP12.35□□□□□ -0.43
EPCAM-205ENST00000474691 NUDT14O95848 222 aa12.35□□□□□ -0.43
EPCAM-205ENST00000474691 PSMB1P20618 241 aaKnown RBP12.35□□□□□ -0.43
EPCAM-205ENST00000474691 SLC6A8P48029 635 aa12.35□□□□□ -0.43
EPCAM-205ENST00000474691 HTR6P50406 440 aa12.35□□□□□ -0.43
EPCAM-205ENST00000474691 CARD18P57730 90 aa12.35□□□□□ -0.43
EPCAM-205ENST00000474691 FAPQ12884 760 aa12.35□□□□□ -0.43
EPCAM-205ENST00000474691 HSPB3Q12988 150 aa12.35□□□□□ -0.43
EPCAM-205ENST00000474691 SLC29A2Q14542 456 aa12.35□□□□□ -0.43
EPCAM-205ENST00000474691 GUSBP1Q15486 140 aa12.35□□□□□ -0.43
EPCAM-205ENST00000474691 CPTPQ5TA50 214 aa12.35□□□□□ -0.43
EPCAM-205ENST00000474691 GALNT18Q6P9A2 607 aa12.35□□□□□ -0.43
EPCAM-205ENST00000474691 OR2L13Q8N349 312 aa12.35□□□□□ -0.43
EPCAM-205ENST00000474691 CCNYL1Q8N7R7 359 aa12.35□□□□□ -0.43
EPCAM-205ENST00000474691 GATSQ8NAP1 163 aa12.35□□□□□ -0.43
EPCAM-205ENST00000474691 SMAP2Q8WU79 429 aaPredicted RBP12.35□□□□□ -0.43
EPCAM-205ENST00000474691 TMEM158Q8WZ71 300 aa12.35□□□□□ -0.43
EPCAM-205ENST00000474691 HSD17B8Q92506 261 aa12.35□□□□□ -0.43
EPCAM-205ENST00000474691 OSTF1Q92882 214 aa12.35□□□□□ -0.43
EPCAM-205ENST00000474691 S100PBPQ96BU1 408 aa12.35□□□□□ -0.43
EPCAM-205ENST00000474691 ELP4Q96EB1 424 aa12.35□□□□□ -0.43
EPCAM-205ENST00000474691 TMEM185BQ9H7F4 350 aa12.35□□□□□ -0.43
EPCAM-205ENST00000474691 BARX1Q9HBU1 254 aaPredicted RBP12.35□□□□□ -0.43
EPCAM-205ENST00000474691 MID1IP1Q9NPA3 183 aa12.35□□□□□ -0.43
EPCAM-205ENST00000474691 RRAGDQ9NQL2 400 aaPredicted RBP12.35□□□□□ -0.43
EPCAM-205ENST00000474691 FBXO34Q9NWN3 711 aa12.35□□□□□ -0.43
EPCAM-205ENST00000474691 POLR3HQ9Y535 204 aaPredicted RBP12.35□□□□□ -0.43
EPCAM-205ENST00000474691 B4DXG7 233 aa12.34□□□□□ -0.43
EPCAM-205ENST00000474691 CDKN1AP38936 164 aa12.34□□□□□ -0.43
EPCAM-205ENST00000474691 RNPS1Q15287 305 aaKnown RBP12.34□□□□□ -0.43
EPCAM-205ENST00000474691 CHRFAM7AQ494W8 412 aa12.34□□□□□ -0.43
EPCAM-205ENST00000474691 SYT10Q6XYQ8 523 aa12.34□□□□□ -0.43
EPCAM-205ENST00000474691 IKBIPQ70UQ0 350 aa12.34□□□□□ -0.43
EPCAM-205ENST00000474691 GALNT10Q86SR1 603 aa12.34□□□□□ -0.43
EPCAM-205ENST00000474691 GGNQ86UU5 652 aa12.34□□□□□ -0.43
EPCAM-205ENST00000474691 LCA5Q86VQ0 697 aa12.34□□□□□ -0.43
EPCAM-205ENST00000474691 MISPQ8IVT2 679 aa12.34□□□□□ -0.43
EPCAM-205ENST00000474691 ZNF619Q8N2I2 560 aa12.34□□□□□ -0.43
EPCAM-205ENST00000474691 GTPBP8Q8N3Z3 284 aaPredicted RBP12.34□□□□□ -0.43
EPCAM-205ENST00000474691 CDRT4Q8N9R6 151 aa12.34□□□□□ -0.43
EPCAM-205ENST00000474691 PIK3R3Q92569 461 aa12.34□□□□□ -0.43
EPCAM-205ENST00000474691 KISS1RQ969F8 398 aaPredicted RBP12.34□□□□□ -0.43
EPCAM-205ENST00000474691 SH3YL1Q96HL8 342 aaPredicted RBP12.34□□□□□ -0.43
EPCAM-205ENST00000474691 RNF145Q96MT1 663 aa12.34□□□□□ -0.43
EPCAM-205ENST00000474691 AMDHD1Q96NU7 426 aa12.34□□□□□ -0.43
EPCAM-205ENST00000474691 TMEM237Q96Q45 408 aa12.34□□□□□ -0.43
EPCAM-205ENST00000474691 FMO2Q99518 471 aa12.34□□□□□ -0.43
EPCAM-205ENST00000474691 USB1Q9BQ65 265 aaKnown RBP12.34□□□□□ -0.43
EPCAM-205ENST00000474691 RTN4RQ9BZR6 473 aa12.34□□□□□ -0.43
EPCAM-205ENST00000474691 MYNNQ9NPC7 610 aa12.34□□□□□ -0.43
EPCAM-205ENST00000474691 ZDHHC18Q9NUE0 388 aa12.34□□□□□ -0.43
EPCAM-205ENST00000474691 TMEM216Q9P0N5 145 aa12.34□□□□□ -0.43
EPCAM-205ENST00000474691 PYCARDQ9ULZ3 195 aa12.34□□□□□ -0.43
EPCAM-205ENST00000474691 LIPT1Q9Y234 373 aa12.34□□□□□ -0.43
EPCAM-205ENST00000474691 CSPG4Q6UVK1 2322 aa12.34□□□□□ -0.43
EPCAM-205ENST00000474691 IGLV3-32A0A0A0MS00 114 aa12.33□□□□□ -0.44
EPCAM-205ENST00000474691 A0A1W2PRB8 838 aa12.33□□□□□ -0.44
EPCAM-205ENST00000474691 GXYLT2A0PJZ3 443 aa12.33□□□□□ -0.44
EPCAM-205ENST00000474691 ALG1L2C9J202 215 aa12.33□□□□□ -0.44
EPCAM-205ENST00000474691 H3BQF6 201 aa12.33□□□□□ -0.44
EPCAM-205ENST00000474691 PDPK1O15530 556 aa12.33□□□□□ -0.44
EPCAM-205ENST00000474691 SEC22BO75396 215 aa12.33□□□□□ -0.44
EPCAM-205ENST00000474691 DDX5P17844 614 aaKnown RBP12.33□□□□□ -0.44
EPCAM-205ENST00000474691 AGTR1P30556 359 aa12.33□□□□□ -0.44
EPCAM-205ENST00000474691 SFTPDP35247 375 aa12.33□□□□□ -0.44
EPCAM-205ENST00000474691 EIF1P41567 113 aaKnown RBP12.33□□□□□ -0.44
EPCAM-205ENST00000474691 MANFP55145 182 aaKnown RBP12.33□□□□□ -0.44
EPCAM-205ENST00000474691 NAA20P61599 178 aa12.33□□□□□ -0.44
EPCAM-205ENST00000474691 SLC18A2Q05940 514 aa12.33□□□□□ -0.44
EPCAM-205ENST00000474691 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.33□□□□□ -0.44
EPCAM-205ENST00000474691 GLE1Q53GS7 698 aaKnown RBP12.33□□□□□ -0.44
EPCAM-205ENST00000474691 CFAP157Q5JU67 520 aa12.33□□□□□ -0.44
EPCAM-205ENST00000474691 FAM219BQ5XKK7 198 aa12.33□□□□□ -0.44
EPCAM-205ENST00000474691 FAM71E1Q6IPT2 247 aa12.33□□□□□ -0.44
EPCAM-205ENST00000474691 ADAM5Q6NVV9 412 aa12.33□□□□□ -0.44
EPCAM-205ENST00000474691 FIGNL1Q6PIW4 674 aa12.33□□□□□ -0.44
EPCAM-205ENST00000474691 RELL1Q8IUW5 271 aa12.33□□□□□ -0.44
EPCAM-205ENST00000474691 LILRA2Q8N149 483 aa12.33□□□□□ -0.44
EPCAM-205ENST00000474691 BANPQ8N9N5 519 aa12.33□□□□□ -0.44
EPCAM-205ENST00000474691 OR6Y1Q8NGX8 325 aa12.33□□□□□ -0.44
EPCAM-205ENST00000474691 B4GALNT2Q8NHY0 566 aa12.33□□□□□ -0.44
EPCAM-205ENST00000474691 FAM76AQ8TAV0 307 aa12.33□□□□□ -0.44
EPCAM-205ENST00000474691 RAB3IL1Q8TBN0 382 aa12.33□□□□□ -0.44
EPCAM-205ENST00000474691 DCAKDQ8WVC6 231 aa12.33□□□□□ -0.44
EPCAM-205ENST00000474691 NANOS1Q8WY41 292 aaKnown RBP12.33□□□□□ -0.44
EPCAM-205ENST00000474691 ROBO4Q8WZ75 1007 aa12.33□□□□□ -0.44
EPCAM-205ENST00000474691 JADE3Q92613 823 aa12.33□□□□□ -0.44
EPCAM-205ENST00000474691 CPNE4Q96A23 557 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms