RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 TBC1D15Q8TC07 691 aa20.17■□□□□ 0.82
CCM2-206ENST00000474617 BRIX1Q8TDN6 353 aaKnown RBP20.17■□□□□ 0.82
CCM2-206ENST00000474617 IL4I1Q96RQ9 567 aa20.17■□□□□ 0.82
CCM2-206ENST00000474617 MND1Q9BWT6 205 aa20.17■□□□□ 0.82
CCM2-206ENST00000474617 SPRTNQ9H040 489 aaPredicted RBP20.17■□□□□ 0.82
CCM2-206ENST00000474617 OR10A5Q9H207 317 aa20.17■□□□□ 0.82
CCM2-206ENST00000474617 THADAQ6YHU6 1953 aa20.16■□□□□ 0.82
CCM2-206ENST00000474617 GXYLT2A0PJZ3 443 aa20.16■□□□□ 0.82
CCM2-206ENST00000474617 DSCR3O14972 297 aa20.16■□□□□ 0.82
CCM2-206ENST00000474617 RPLP0P05388 317 aaKnown RBP20.16■□□□□ 0.82
CCM2-206ENST00000474617 DCNP07585 359 aaKnown RBP20.16■□□□□ 0.82
CCM2-206ENST00000474617 DBTP11182 482 aaKnown RBP20.16■□□□□ 0.82
CCM2-206ENST00000474617 TGFBR2P37173 567 aa20.16■□□□□ 0.82
CCM2-206ENST00000474617 ATP12AP54707 1039 aa20.16■□□□□ 0.82
CCM2-206ENST00000474617 CTBP2P56545 445 aa20.16■□□□□ 0.82
CCM2-206ENST00000474617 DCAF7P61962 342 aa20.16■□□□□ 0.82
CCM2-206ENST00000474617 OCA2Q04671 838 aa20.16■□□□□ 0.82
CCM2-206ENST00000474617 RAB40BQ12829 278 aa20.16■□□□□ 0.82
CCM2-206ENST00000474617 C1DQ13901 141 aaKnown RBP20.16■□□□□ 0.82
CCM2-206ENST00000474617 ZNF829Q3KNS6 432 aaPredicted RBP20.16■□□□□ 0.82
CCM2-206ENST00000474617 ZNF620Q6ZNG0 422 aa20.16■□□□□ 0.82
CCM2-206ENST00000474617 NKAIN4Q8IVV8 208 aa20.16■□□□□ 0.82
CCM2-206ENST00000474617 NRMQ8IXM6 262 aa20.16■□□□□ 0.82
CCM2-206ENST00000474617 PROKR2Q8NFJ6 384 aa20.16■□□□□ 0.82
CCM2-206ENST00000474617 TMEM239Q8WW34 195 aa20.16■□□□□ 0.82
CCM2-206ENST00000474617 FAM46AQ96IP4 442 aaKnown RBP20.16■□□□□ 0.82
CCM2-206ENST00000474617 SLC46A1Q96NT5 459 aa20.16■□□□□ 0.82
CCM2-206ENST00000474617 GPA33Q99795 319 aa20.16■□□□□ 0.82
CCM2-206ENST00000474617 TSSK6Q9BXA6 273 aa20.16■□□□□ 0.82
CCM2-206ENST00000474617 ZNF768Q9H5H4 540 aaKnown RBP20.16■□□□□ 0.82
CCM2-206ENST00000474617 AMBNQ9NP70 447 aa20.16■□□□□ 0.82
CCM2-206ENST00000474617 CTPS2Q9NRF8 586 aa20.16■□□□□ 0.82
CCM2-206ENST00000474617 TBC1D23Q9NUY8 699 aa20.16■□□□□ 0.82
CCM2-206ENST00000474617 DIMT1Q9UNQ2 313 aaKnown RBP20.16■□□□□ 0.82
CCM2-206ENST00000474617 SRPK3Q9UPE1 567 aa20.16■□□□□ 0.82
CCM2-206ENST00000474617 SLC35A3Q9Y2D2 325 aa20.16■□□□□ 0.82
CCM2-206ENST00000474617 KNL1Q8NG31 2342 aa20.15■□□□□ 0.82
CCM2-206ENST00000474617 EFCAB7A8K855 629 aa20.15■□□□□ 0.82
CCM2-206ENST00000474617 NPIPB9F8W1W9 429 aa20.15■□□□□ 0.82
CCM2-206ENST00000474617 PEX12O00623 359 aa20.15■□□□□ 0.82
CCM2-206ENST00000474617 POLR1CO15160 346 aaPredicted RBP20.15■□□□□ 0.82
CCM2-206ENST00000474617 CHP2O43745 196 aa20.15■□□□□ 0.82
CCM2-206ENST00000474617 TLX2O43763 284 aaPredicted RBP20.15■□□□□ 0.82
CCM2-206ENST00000474617 IFNA16P05015 189 aa20.15■□□□□ 0.82
CCM2-206ENST00000474617 MAT1AQ00266 395 aaKnown RBP20.15■□□□□ 0.82
CCM2-206ENST00000474617 ZNF91Q05481 1191 aa20.15■□□□□ 0.82
CCM2-206ENST00000474617 PRKCDQ05655 676 aa20.15■□□□□ 0.82
CCM2-206ENST00000474617 FOXD4Q12950 439 aaPredicted RBP20.15■□□□□ 0.82
CCM2-206ENST00000474617 FGFBP1Q14512 234 aa20.15■□□□□ 0.82
CCM2-206ENST00000474617 SYT14P1Q58G82 188 aa20.15■□□□□ 0.82
CCM2-206ENST00000474617 DGAT2L6Q6ZPD8 337 aa20.15■□□□□ 0.82
CCM2-206ENST00000474617 TMPRSS11FQ6ZWK6 438 aa20.15■□□□□ 0.82
CCM2-206ENST00000474617 KIF18BQ86Y91 864 aa20.15■□□□□ 0.82
CCM2-206ENST00000474617 ZNF615Q8N8J6 731 aa20.15■□□□□ 0.82
CCM2-206ENST00000474617 POGLUT1Q8NBL1 392 aa20.15■□□□□ 0.82
CCM2-206ENST00000474617 OR2T33Q8NG76 320 aa20.15■□□□□ 0.82
CCM2-206ENST00000474617 FGF11Q92914 225 aa20.15■□□□□ 0.82
CCM2-206ENST00000474617 BORCS5Q969J3 196 aa20.15■□□□□ 0.82
CCM2-206ENST00000474617 LGALS12Q96DT0 336 aa20.15■□□□□ 0.82
CCM2-206ENST00000474617 VMP1Q96GC9 406 aa20.15■□□□□ 0.82
CCM2-206ENST00000474617 PRMT8Q9NR22 394 aaPredicted RBP20.15■□□□□ 0.82
CCM2-206ENST00000474617 LANCL2Q9NS86 450 aa20.15■□□□□ 0.82
CCM2-206ENST00000474617 KCNE5Q9UJ90 142 aa20.15■□□□□ 0.82
CCM2-206ENST00000474617 CBLCQ9ULV8 474 aa20.15■□□□□ 0.82
CCM2-206ENST00000474617 MED31Q9Y3C7 131 aa20.15■□□□□ 0.82
CCM2-206ENST00000474617 A3GALT2U3KPV4 340 aa20.15■□□□□ 0.82
CCM2-206ENST00000474617 TP53BP1Q12888 1972 aaPredicted RBP20.15■□□□□ 0.82
CCM2-206ENST00000474617 EML5Q05BV3 1969 aa20.14■□□□□ 0.82
CCM2-206ENST00000474617 TGFBR3LH3BV60 316 aa20.14■□□□□ 0.81
CCM2-206ENST00000474617 RCBTB2O95199 551 aa20.14■□□□□ 0.81
CCM2-206ENST00000474617 ANKRD34CP0C6C1 535 aa20.14■□□□□ 0.81
CCM2-206ENST00000474617 GIMD1P0DJR0 217 aa20.14■□□□□ 0.81
CCM2-206ENST00000474617 EPHA8P29322 1005 aaPredicted RBP20.14■□□□□ 0.81
CCM2-206ENST00000474617 CLK1P49759 484 aaKnown RBP20.14■□□□□ 0.81
CCM2-206ENST00000474617 AQP6Q13520 282 aa20.14■□□□□ 0.81
CCM2-206ENST00000474617 SPCS2Q15005 226 aa20.14■□□□□ 0.81
CCM2-206ENST00000474617 CLPPQ16740 277 aaPredicted RBP20.14■□□□□ 0.81
CCM2-206ENST00000474617 AMZ1Q400G9 498 aa20.14■□□□□ 0.81
CCM2-206ENST00000474617 MINDY4Q4G0A6 757 aa20.14■□□□□ 0.81
CCM2-206ENST00000474617 C3orf38Q5JPI3 329 aa20.14■□□□□ 0.81
CCM2-206ENST00000474617 NKAIN2Q5VXU1 208 aa20.14■□□□□ 0.81
CCM2-206ENST00000474617 PMS2CLQ68D20 193 aa20.14■□□□□ 0.81
CCM2-206ENST00000474617 GDPGP1Q6ZNW5 385 aa20.14■□□□□ 0.81
CCM2-206ENST00000474617 ZNF527Q8NB42 609 aa20.14■□□□□ 0.81
CCM2-206ENST00000474617 KBTBD8Q8NFY9 601 aa20.14■□□□□ 0.81
CCM2-206ENST00000474617 OR52L1Q8NGH7 329 aa20.14■□□□□ 0.81
CCM2-206ENST00000474617 S100ZQ8WXG8 99 aa20.14■□□□□ 0.81
CCM2-206ENST00000474617 PLEKHA8Q96JA3 519 aa20.14■□□□□ 0.81
CCM2-206ENST00000474617 LRR1Q96L50 414 aa20.14■□□□□ 0.81
CCM2-206ENST00000474617 PRSS27Q9BQR3 290 aa20.14■□□□□ 0.81
CCM2-206ENST00000474617 CNPPD1Q9BV87 410 aa20.14■□□□□ 0.81
CCM2-206ENST00000474617 RBCK1Q9BYM8 510 aa20.14■□□□□ 0.81
CCM2-206ENST00000474617 BAIAP2Q9UQB8 552 aa20.14■□□□□ 0.81
CCM2-206ENST00000474617 UNC119BA6NIH7 251 aa20.13■□□□□ 0.81
CCM2-206ENST00000474617 EFCAB9A8MZ26 197 aa20.13■□□□□ 0.81
CCM2-206ENST00000474617 KDM4EB2RXH2 506 aaPredicted RBP20.13■□□□□ 0.81
CCM2-206ENST00000474617 AIREO43918 545 aa20.13■□□□□ 0.81
CCM2-206ENST00000474617 PRKYO43930 277 aa20.13■□□□□ 0.81
CCM2-206ENST00000474617 RAB36O95755 333 aa20.13■□□□□ 0.81
CCM2-206ENST00000474617 THY1P04216 161 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms