RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 IL17BQ9UHF5 180 aa9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 TMCC3Q9ULS5 477 aa9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 ABCG2Q9UNQ0 655 aa9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 POLHQ9Y253 713 aa9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 MSRB2Q9Y3D2 182 aa9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 ORC6Q9Y5N6 252 aa9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 DMDP11532 3685 aa9.47□□□□□ -0.89
PRPF38A-202ENST00000474048 ZNF292O60281 2723 aa9.46□□□□□ -0.89
PRPF38A-202ENST00000474048 SERINC4A6NH21 518 aa9.46□□□□□ -0.9
PRPF38A-202ENST00000474048 ARGFXA6NJG6 315 aa9.46□□□□□ -0.9
PRPF38A-202ENST00000474048 M0R3H8 397 aa9.46□□□□□ -0.9
PRPF38A-202ENST00000474048 TERTO14746 1132 aaKnown RBP9.46□□□□□ -0.9
PRPF38A-202ENST00000474048 KLK10O43240 276 aa9.46□□□□□ -0.9
PRPF38A-202ENST00000474048 SCO2O43819 266 aa9.46□□□□□ -0.9
PRPF38A-202ENST00000474048 ICOSLGO75144 302 aa9.46□□□□□ -0.9
PRPF38A-202ENST00000474048 OXSR1O95747 527 aaPredicted RBP9.46□□□□□ -0.9
PRPF38A-202ENST00000474048 ITGAMP11215 1152 aa9.46□□□□□ -0.9
PRPF38A-202ENST00000474048 CYP4B1P13584 511 aa9.46□□□□□ -0.9
PRPF38A-202ENST00000474048 RHCEP18577 417 aa9.46□□□□□ -0.9
PRPF38A-202ENST00000474048 TBXA2RP21731 343 aa9.46□□□□□ -0.9
PRPF38A-202ENST00000474048 F8A1P23610 371 aa9.46□□□□□ -0.9
PRPF38A-202ENST00000474048 RRM2P31350 389 aa9.46□□□□□ -0.9
PRPF38A-202ENST00000474048 PLA2G5P39877 138 aa9.46□□□□□ -0.9
PRPF38A-202ENST00000474048 OC90Q02509 493 aaPredicted RBP9.46□□□□□ -0.9
PRPF38A-202ENST00000474048 ZNF141Q15928 474 aa9.46□□□□□ -0.9
PRPF38A-202ENST00000474048 DUSP7Q16829 419 aa9.46□□□□□ -0.9
PRPF38A-202ENST00000474048 FGD3Q5JSP0 725 aa9.46□□□□□ -0.9
PRPF38A-202ENST00000474048 DCAF10Q5QP82 559 aa9.46□□□□□ -0.9
PRPF38A-202ENST00000474048 OR2T5Q6IEZ7 315 aa9.46□□□□□ -0.9
PRPF38A-202ENST00000474048 LRRC69Q6ZNQ3 347 aa9.46□□□□□ -0.9
PRPF38A-202ENST00000474048 AMIGO2Q86SJ2 522 aa9.46□□□□□ -0.9
PRPF38A-202ENST00000474048 ZDHHC13Q8IUH4 622 aa9.46□□□□□ -0.9
PRPF38A-202ENST00000474048 SVOPLQ8N434 492 aa9.46□□□□□ -0.9
PRPF38A-202ENST00000474048 SIRT6Q8N6T7 355 aa9.46□□□□□ -0.9
PRPF38A-202ENST00000474048 ZNF441Q8N8Z8 693 aa9.46□□□□□ -0.9
PRPF38A-202ENST00000474048 OR2T29Q8NH02 315 aa9.46□□□□□ -0.9
PRPF38A-202ENST00000474048 SNIP1Q8TAD8 396 aaKnown RBP9.46□□□□□ -0.9
PRPF38A-202ENST00000474048 TTC9Q92623 222 aa9.46□□□□□ -0.9
PRPF38A-202ENST00000474048 SPACA9Q96E40 222 aaPredicted RBP9.46□□□□□ -0.9
PRPF38A-202ENST00000474048 PIP5K1AQ99755 562 aa9.46□□□□□ -0.9
PRPF38A-202ENST00000474048 PKP2Q99959 881 aa9.46□□□□□ -0.9
PRPF38A-202ENST00000474048 MESP1Q9BRJ9 268 aa9.46□□□□□ -0.9
PRPF38A-202ENST00000474048 DPH1Q9BZG8 443 aa9.46□□□□□ -0.9
PRPF38A-202ENST00000474048 POLR2J2Q9GZM3 115 aaKnown RBP9.46□□□□□ -0.9
PRPF38A-202ENST00000474048 LHPPQ9H008 270 aa9.46□□□□□ -0.9
PRPF38A-202ENST00000474048 POLR2J3Q9H1A7 115 aaKnown RBP9.46□□□□□ -0.9
PRPF38A-202ENST00000474048 TMEM27Q9HBJ8 222 aa9.46□□□□□ -0.9
PRPF38A-202ENST00000474048 C8orf4Q9NR00 106 aa9.46□□□□□ -0.9
PRPF38A-202ENST00000474048 ZNF223Q9UK11 482 aaPredicted RBP9.46□□□□□ -0.9
PRPF38A-202ENST00000474048 SAMHD1Q9Y3Z3 626 aaKnown RBP9.46□□□□□ -0.9
PRPF38A-202ENST00000474048 TESMINQ9Y4I5 508 aa9.46□□□□□ -0.9
PRPF38A-202ENST00000474048 ENPP4Q9Y6X5 453 aa9.46□□□□□ -0.9
PRPF38A-202ENST00000474048 A0A1W2PQD3 144 aa9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 PRAMEF25A6NGN4 478 aa9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 SAC3D1A6NKF1 404 aa9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 H3BNX3 289 aa9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 TNFRSF11BO00300 401 aa9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 ZNF264O43296 627 aa9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 PRKNO60260 465 aaPredicted RBP9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 TSPAN2O60636 221 aa9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 GCM2O75603 506 aaPredicted RBP9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 DNAJB5O75953 348 aa9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 GADD45GO95257 159 aa9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 LGI1O95970 557 aa9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 IGKV1D-16P01601 117 aa9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 P04436 131 aa9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 UBTFL6P0CB48 400 aaPredicted RBP9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 SPINK2P20155 84 aa9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 TNFRSF1BP20333 461 aa9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 RPS4Y1P22090 263 aaKnown RBP9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 ITPKBP27987 946 aa9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 EVI2BP34910 448 aa9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 VHLP40337 213 aa9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 MAGEA2P43356 314 aa9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 SLC6A8P48029 635 aa9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 CDH12P55289 794 aa9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 VLDLRP98155 873 aa9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 CHAF1BQ13112 559 aa9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 CLN3Q13286 438 aa9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 GK3PQ14409 553 aa9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 FGFBP1Q14512 234 aa9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 MAPK11Q15759 364 aa9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 LRRC36Q1X8D7 754 aa9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 IL20RBQ6UXL0 311 aa9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 PIWIL3Q7Z3Z3 882 aaKnown RBP9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 HIPK1Q86Z02 1210 aa9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 GPALPP1Q8IXQ4 340 aa9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 GATSQ8NAP1 163 aa9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 TOR1AIP2Q8NFQ8 470 aa9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 ZNF563Q8TA94 476 aa9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 BRIX1Q8TDN6 353 aaKnown RBP9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 SLC35B4Q969S0 331 aa9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 SLCO4A1Q96BD0 722 aa9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 PRRC1Q96M27 445 aa9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 ZNF300Q96RE9 604 aaPredicted RBP9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 LMF1Q96S06 567 aa9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 RASL10BQ96S79 203 aa9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 CCNL2Q96S94 520 aaPredicted RBP9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 MCHR1Q99705 422 aa9.45□□□□□ -0.9
PRPF38A-202ENST00000474048 ZNF559Q9BR84 538 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms